RNA–Protein interactions for RNA: ENST00000541681.1

VEGFB-203, Transcript of vascular endothelial growth factor B, humanhuman

TSL 3

Gene VEGFB, Length 225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-203ENST00000541681 USB1Q9BQ65 265 aaKnown RBP5.57□□□□□ -1.52
VEGFB-203ENST00000541681 RTBDNQ9BSG5 229 aaPredicted RBP5.57□□□□□ -1.52
VEGFB-203ENST00000541681 SFXN3Q9BWM7 321 aa5.57□□□□□ -1.52
VEGFB-203ENST00000541681 CHIAQ9BZP6 476 aa5.57□□□□□ -1.52
VEGFB-203ENST00000541681 OR2J1Q9GZK6 312 aa5.57□□□□□ -1.52
VEGFB-203ENST00000541681 OPN3Q9H1Y3 402 aaPredicted RBP5.57□□□□□ -1.52
VEGFB-203ENST00000541681 OR51B6Q9H340 312 aa5.57□□□□□ -1.52
VEGFB-203ENST00000541681 ZNF442Q9H7R0 627 aa5.57□□□□□ -1.52
VEGFB-203ENST00000541681 FN3KRPQ9HA64 309 aa5.57□□□□□ -1.52
VEGFB-203ENST00000541681 ZNF629Q9UEG4 869 aaPredicted RBP5.57□□□□□ -1.52
VEGFB-203ENST00000541681 OPN4Q9UHM6 478 aa5.57□□□□□ -1.52
VEGFB-203ENST00000541681 C14orf166Q9Y224 244 aaKnown RBP5.57□□□□□ -1.52
VEGFB-203ENST00000541681 SLC25A15Q9Y619 301 aa5.57□□□□□ -1.52
VEGFB-203ENST00000541681 AKAP9Q99996 3911 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 ZFHX3Q15911 3703 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 IGKV1D-8A0A087WSZ0 117 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 TRBV6-6A0A0A6YYG2 114 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 IGHV1-18A0A0C4DH31 117 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.56□□□□□ -1.52
VEGFB-203ENST00000541681 A0A1B0GWJ7 208 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 A0A1W2PR80 420 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 PLSCR5A0PG75 271 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 OR5H14A6NHG9 310 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 TUBAL3A6NHL2 446 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 DBX1A6NMT0 343 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 MCRIP1C9JLW8 97 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 SDCBPO00560 298 aaPredicted RBP5.56□□□□□ -1.52
VEGFB-203ENST00000541681 SYNGR1O43759 233 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 LILRA1O75019 489 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 NOS1APO75052 506 aaPredicted RBP5.56□□□□□ -1.52
VEGFB-203ENST00000541681 OR7C1O76099 320 aaPredicted RBP5.56□□□□□ -1.52
VEGFB-203ENST00000541681 SFT2D2O95562 160 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 NAPSAO96009 420 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 CTSDP07339 412 aaPredicted RBP5.56□□□□□ -1.52
VEGFB-203ENST00000541681 CTXN2P0C2S0 81 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 CECR9P0C854 216 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 OR5H8P0DN80 308 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 AKR1C4P17516 323 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 NFYAP23511 347 aaPredicted RBP5.56□□□□□ -1.52
VEGFB-203ENST00000541681 GCH1P30793 250 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 OPRM1P35372 400 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 NPY4RP50391 375 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 UCP3P55916 312 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 H2BFSP57053 126 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 ERVK11-1P61568 191 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 CYCSP99999 105 aaKnown RBP5.56□□□□□ -1.52
VEGFB-203ENST00000541681 MZT1Q08AG7 82 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 PSG7Q13046 419 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 RBM39Q14498 530 aaKnown RBP5.56□□□□□ -1.52
VEGFB-203ENST00000541681 TSC22D1Q15714 1073 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 LY6G6FQ5SQ64 297 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 MBNL2Q5VZF2 373 aaKnown RBP5.56□□□□□ -1.52
VEGFB-203ENST00000541681 C11orf88Q6PI97 169 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 HAGHLQ6PII5 290 aaPredicted RBP5.56□□□□□ -1.52
VEGFB-203ENST00000541681 ZNF474Q6S9Z5 364 aaPredicted RBP5.56□□□□□ -1.52
VEGFB-203ENST00000541681 C17orf107Q6ZR85 190 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 SSX8Q7RTT4 187 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 SCCPDHQ8NBX0 429 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 ADAD2Q8NCV1 583 aaKnown RBP5.56□□□□□ -1.52
VEGFB-203ENST00000541681 BHLHE23Q8NDY6 225 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 OR5M8Q8NGP6 311 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 LINC01560Q8TB33 94 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 KLF14Q8TD94 323 aaPredicted RBP5.56□□□□□ -1.52
VEGFB-203ENST00000541681 FAM222BQ8WU58 562 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 TMEM230Q96A57 120 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 HDHD3Q9BSH5 251 aaPredicted RBP5.56□□□□□ -1.52
VEGFB-203ENST00000541681 PIGMQ9H3S5 423 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 C5orf66Q9H5L9 145 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 C12orf4Q9NQ89 552 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 TMEM100Q9NV29 134 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 TREM2Q9NZC2 230 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 PURGQ9UJV8 347 aaKnown RBP5.56□□□□□ -1.52
VEGFB-203ENST00000541681 POLDIP2Q9Y2S7 368 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 SPEF1Q9Y4P9 236 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 MTORP42345 2549 aa5.56□□□□□ -1.52
VEGFB-203ENST00000541681 SETD2Q9BYW2 2564 aaPredicted RBP5.56□□□□□ -1.52
VEGFB-203ENST00000541681 IGHV2OR16-5A0A0B4J2B6 119 aa5.55□□□□□ -1.52
VEGFB-203ENST00000541681 RFPL4AA6NLU0 287 aa5.55□□□□□ -1.52
VEGFB-203ENST00000541681 A8MXE2 369 aa5.55□□□□□ -1.52
VEGFB-203ENST00000541681 RFPL4AL1F8VTS6 287 aa5.55□□□□□ -1.52
VEGFB-203ENST00000541681 F8VVB4 439 aa5.55□□□□□ -1.52
VEGFB-203ENST00000541681 F8VWA3 439 aa5.55□□□□□ -1.52
VEGFB-203ENST00000541681 H7C1Q1 480 aa5.55□□□□□ -1.52
VEGFB-203ENST00000541681 SIX6O95475 246 aa5.55□□□□□ -1.52
VEGFB-203ENST00000541681 PGA5P0DJD9 388 aa5.55□□□□□ -1.52
VEGFB-203ENST00000541681 SLC25A4P12235 298 aa5.55□□□□□ -1.52
VEGFB-203ENST00000541681 PRKACAP17612 351 aa5.55□□□□□ -1.52
VEGFB-203ENST00000541681 GLRA1P23415 457 aa5.55□□□□□ -1.52
VEGFB-203ENST00000541681 VAMP1P23763 118 aa5.55□□□□□ -1.52
VEGFB-203ENST00000541681 MDH2P40926 338 aaKnown RBP5.55□□□□□ -1.52
VEGFB-203ENST00000541681 GLP1RP43220 463 aa5.55□□□□□ -1.52
VEGFB-203ENST00000541681 ERVS71-1P61550 626 aa5.55□□□□□ -1.52
VEGFB-203ENST00000541681 SEC61A1P61619 476 aaKnown RBP5.55□□□□□ -1.52
VEGFB-203ENST00000541681 SNRPD2P62316 118 aaKnown RBP5.55□□□□□ -1.52
VEGFB-203ENST00000541681 SUPT4H1P63272 117 aaKnown RBP5.55□□□□□ -1.52
VEGFB-203ENST00000541681 IKZF1Q13422 519 aa5.55□□□□□ -1.52
VEGFB-203ENST00000541681 OR8G1Q15617 311 aa5.55□□□□□ -1.52
VEGFB-203ENST00000541681 ALKBH6Q3KRA9 238 aa5.55□□□□□ -1.52
VEGFB-203ENST00000541681 SPATA46Q5T0L3 261 aa5.55□□□□□ -1.52
VEGFB-203ENST00000541681 DCAF12L2Q5VW00 463 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms