RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 FBXW4P57775 412 aa12.85□□□□□ -0.35
AC005840.4-201ENST00000541242 PLXDC1Q8IUK5 500 aa12.85□□□□□ -0.35
AC005840.4-201ENST00000541242 OR1P1Q8NH06 330 aa12.85□□□□□ -0.35
AC005840.4-201ENST00000541242 SNIP1Q8TAD8 396 aaKnown RBP12.85□□□□□ -0.35
AC005840.4-201ENST00000541242 DNASE2BQ8WZ79 361 aa12.85□□□□□ -0.35
AC005840.4-201ENST00000541242 ZNF665Q9H7R5 613 aa12.85□□□□□ -0.35
AC005840.4-201ENST00000541242 CDH20Q9HBT6 801 aa12.85□□□□□ -0.35
AC005840.4-201ENST00000541242 GPR173Q9NS66 373 aa12.85□□□□□ -0.35
AC005840.4-201ENST00000541242 DUX1O43812 170 aa12.85□□□□□ -0.35
AC005840.4-201ENST00000541242 CLN3Q13286 438 aa12.85□□□□□ -0.35
AC005840.4-201ENST00000541242 THEM4Q5T1C6 240 aa12.85□□□□□ -0.35
AC005840.4-201ENST00000541242 FAM180AQ6UWF9 173 aa12.85□□□□□ -0.35
AC005840.4-201ENST00000541242 SLC16A14Q7RTX9 510 aa12.85□□□□□ -0.35
AC005840.4-201ENST00000541242 OR8G5Q8NG78 346 aa12.85□□□□□ -0.35
AC005840.4-201ENST00000541242 OR6X1Q8NH79 312 aa12.85□□□□□ -0.35
AC005840.4-201ENST00000541242 KLHL13Q9P2N7 655 aa12.85□□□□□ -0.35
AC005840.4-201ENST00000541242 COL5A1P20908 1838 aaPredicted RBP12.84□□□□□ -0.35
AC005840.4-201ENST00000541242 EXPH5Q8NEV8 1989 aa12.84□□□□□ -0.35
AC005840.4-201ENST00000541242 A0A1W2PNR3 127 aa12.84□□□□□ -0.35
AC005840.4-201ENST00000541242 LIPT2A6NK58 231 aa12.84□□□□□ -0.35
AC005840.4-201ENST00000541242 GLB1P16278 677 aa12.84□□□□□ -0.35
AC005840.4-201ENST00000541242 ALDH3B1P43353 468 aa12.84□□□□□ -0.35
AC005840.4-201ENST00000541242 PRSS8Q16651 343 aa12.84□□□□□ -0.35
AC005840.4-201ENST00000541242 BATF2Q8N1L9 274 aa12.84□□□□□ -0.35
AC005840.4-201ENST00000541242 SPEM1Q8N4L4 309 aa12.84□□□□□ -0.35
AC005840.4-201ENST00000541242 NOXO1Q8NFA2 376 aa12.84□□□□□ -0.35
AC005840.4-201ENST00000541242 HIST1H2AAQ96QV6 131 aa12.84□□□□□ -0.35
AC005840.4-201ENST00000541242 ACTR3CQ9C0K3 210 aaPredicted RBP12.84□□□□□ -0.35
AC005840.4-201ENST00000541242 PLEKHF2Q9H8W4 249 aa12.84□□□□□ -0.35
AC005840.4-201ENST00000541242 XKRY2A2RUG3 117 aa12.84□□□□□ -0.35
AC005840.4-201ENST00000541242 HLA-HP01893 362 aa12.84□□□□□ -0.35
AC005840.4-201ENST00000541242 ZNF25P17030 456 aaPredicted RBP12.84□□□□□ -0.35
AC005840.4-201ENST00000541242 ARL6IP1Q15041 203 aa12.84□□□□□ -0.35
AC005840.4-201ENST00000541242 SHBQ15464 509 aa12.84□□□□□ -0.35
AC005840.4-201ENST00000541242 LCN15Q6UWW0 184 aa12.84□□□□□ -0.35
AC005840.4-201ENST00000541242 OR10A7Q8NGE5 316 aa12.84□□□□□ -0.35
AC005840.4-201ENST00000541242 TMEM234Q8WY98 164 aa12.84□□□□□ -0.35
AC005840.4-201ENST00000541242 NAT6Q93015 286 aa12.84□□□□□ -0.35
AC005840.4-201ENST00000541242 ZNF501Q96CX3 271 aaPredicted RBP12.84□□□□□ -0.35
AC005840.4-201ENST00000541242 VSIRQ9H7M9 311 aa12.84□□□□□ -0.35
AC005840.4-201ENST00000541242 FGF21Q9NSA1 209 aa12.84□□□□□ -0.35
AC005840.4-201ENST00000541242 LYRM2Q9NU23 88 aaPredicted RBP12.84□□□□□ -0.35
AC005840.4-201ENST00000541242 LRFN1Q9P244 771 aa12.84□□□□□ -0.35
AC005840.4-201ENST00000541242 SEMA5BQ9P283 1151 aa12.84□□□□□ -0.35
AC005840.4-201ENST00000541242 FRYLO94915 3013 aa12.83□□□□□ -0.35
AC005840.4-201ENST00000541242 EML6Q6ZMW3 1958 aa12.83□□□□□ -0.35
AC005840.4-201ENST00000541242 ZNF732B4DXR9 585 aa12.83□□□□□ -0.36
AC005840.4-201ENST00000541242 H3BP45 60 aa12.83□□□□□ -0.36
AC005840.4-201ENST00000541242 AADACP22760 399 aa12.83□□□□□ -0.36
AC005840.4-201ENST00000541242 ERVS71-1P61550 626 aa12.83□□□□□ -0.36
AC005840.4-201ENST00000541242 VAMP2P63027 116 aa12.83□□□□□ -0.36
AC005840.4-201ENST00000541242 H3F3AP84243 136 aa12.83□□□□□ -0.36
AC005840.4-201ENST00000541242 MYBPHQ13203 477 aa12.83□□□□□ -0.36
AC005840.4-201ENST00000541242 PIGYQ3MUY2 71 aa12.83□□□□□ -0.36
AC005840.4-201ENST00000541242 Q6ZPA2 131 aa12.83□□□□□ -0.36
AC005840.4-201ENST00000541242 LRP11Q86VZ4 500 aa12.83□□□□□ -0.36
AC005840.4-201ENST00000541242 ARL6IP6Q8N6S5 226 aa12.83□□□□□ -0.36
AC005840.4-201ENST00000541242 BEND2Q8NDZ0 799 aa12.83□□□□□ -0.36
AC005840.4-201ENST00000541242 RNASEH2CQ8TDP1 164 aaKnown RBP12.83□□□□□ -0.36
AC005840.4-201ENST00000541242 RBMXL1Q96E39 390 aaKnown RBP12.83□□□□□ -0.36
AC005840.4-201ENST00000541242 ZNF160Q9HCG1 818 aa12.83□□□□□ -0.36
AC005840.4-201ENST00000541242 DKKL1Q9UK85 242 aa12.83□□□□□ -0.36
AC005840.4-201ENST00000541242 TRBV24-1A0A075B6N3 115 aa12.83□□□□□ -0.36
AC005840.4-201ENST00000541242 C3orf85A0A1B0GTC6 90 aa12.83□□□□□ -0.36
AC005840.4-201ENST00000541242 B4DEV8 164 aa12.83□□□□□ -0.36
AC005840.4-201ENST00000541242 K7ESF4 209 aa12.83□□□□□ -0.36
AC005840.4-201ENST00000541242 ADAM20O43506 726 aa12.83□□□□□ -0.36
AC005840.4-201ENST00000541242 PCP4P48539 62 aa12.83□□□□□ -0.36
AC005840.4-201ENST00000541242 DCAF7P61962 342 aa12.83□□□□□ -0.36
AC005840.4-201ENST00000541242 TLE4Q04727 773 aa12.83□□□□□ -0.36
AC005840.4-201ENST00000541242 SSX7Q7RTT5 188 aa12.83□□□□□ -0.36
AC005840.4-201ENST00000541242 THNSL2Q86YJ6 484 aa12.83□□□□□ -0.36
AC005840.4-201ENST00000541242 UEVLDQ8IX04 471 aa12.83□□□□□ -0.36
AC005840.4-201ENST00000541242 DDIT4LQ96D03 193 aa12.83□□□□□ -0.36
AC005840.4-201ENST00000541242 SDF2L1Q9HCN8 221 aa12.83□□□□□ -0.36
AC005840.4-201ENST00000541242 WNT16Q9UBV4 365 aa12.83□□□□□ -0.36
AC005840.4-201ENST00000541242 COPS7AQ9UBW8 275 aa12.83□□□□□ -0.36
AC005840.4-201ENST00000541242 ADAMTS20P59510 1910 aa12.82□□□□□ -0.36
AC005840.4-201ENST00000541242 A0A1B0GX78 115 aa12.82□□□□□ -0.36
AC005840.4-201ENST00000541242 IGHG1P01857 330 aa12.82□□□□□ -0.36
AC005840.4-201ENST00000541242 GZMHP20718 246 aa12.82□□□□□ -0.36
AC005840.4-201ENST00000541242 MTCP1P56278 107 aa12.82□□□□□ -0.36
AC005840.4-201ENST00000541242 ABLIM2Q6H8Q1 611 aa12.82□□□□□ -0.36
AC005840.4-201ENST00000541242 TEX38Q6PEX7 206 aa12.82□□□□□ -0.36
AC005840.4-201ENST00000541242 OR1N1Q8NGS0 311 aa12.82□□□□□ -0.36
AC005840.4-201ENST00000541242 SYT3Q9BQG1 590 aa12.82□□□□□ -0.36
AC005840.4-201ENST00000541242 LAMP3Q9UQV4 416 aa12.82□□□□□ -0.36
AC005840.4-201ENST00000541242 CACNA1EQ15878 2313 aa12.82□□□□□ -0.36
AC005840.4-201ENST00000541242 DOCK11Q5JSL3 2073 aa12.82□□□□□ -0.36
AC005840.4-201ENST00000541242 TRDCB7Z8K6 153 aa12.82□□□□□ -0.36
AC005840.4-201ENST00000541242 CA11O75493 328 aa12.82□□□□□ -0.36
AC005840.4-201ENST00000541242 DHRS3O75911 302 aa12.82□□□□□ -0.36
AC005840.4-201ENST00000541242 OR2J2O76002 312 aa12.82□□□□□ -0.36
AC005840.4-201ENST00000541242 ZNF133P52736 654 aaPredicted RBP12.82□□□□□ -0.36
AC005840.4-201ENST00000541242 ZNF100Q8IYN0 542 aa12.82□□□□□ -0.36
AC005840.4-201ENST00000541242 RSG1Q9BU20 258 aa12.82□□□□□ -0.36
AC005840.4-201ENST00000541242 DIDO1Q9BTC0 2240 aaKnown RBP12.81□□□□□ -0.36
AC005840.4-201ENST00000541242 IGKV1-27A0A075B6S5 117 aa12.81□□□□□ -0.36
AC005840.4-201ENST00000541242 VSTM2BA6NLU5 285 aa12.81□□□□□ -0.36
AC005840.4-201ENST00000541242 A6NNC1 897 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms