RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 ST3GAL6Q9Y274 331 aa10.78□□□□□ -0.68
RNF4-222ENST00000541204 RFNGQ9Y644 331 aa10.78□□□□□ -0.68
RNF4-222ENST00000541204 CYTIPO60759 359 aa10.78□□□□□ -0.68
RNF4-222ENST00000541204 NRASP01111 189 aa10.78□□□□□ -0.68
RNF4-222ENST00000541204 SPINK2P20155 84 aa10.78□□□□□ -0.68
RNF4-222ENST00000541204 PPP1CCP36873 323 aaKnown RBP10.78□□□□□ -0.68
RNF4-222ENST00000541204 LHX2P50458 406 aa10.78□□□□□ -0.68
RNF4-222ENST00000541204 ZNF92Q03936 586 aa10.78□□□□□ -0.68
RNF4-222ENST00000541204 FABP9Q0Z7S8 132 aa10.78□□□□□ -0.68
RNF4-222ENST00000541204 LGI3Q8N145 548 aa10.78□□□□□ -0.68
RNF4-222ENST00000541204 SLC35G3Q8N808 338 aa10.78□□□□□ -0.68
RNF4-222ENST00000541204 CCDC54Q8NEL0 328 aa10.78□□□□□ -0.68
RNF4-222ENST00000541204 TP53RKQ96S44 253 aa10.78□□□□□ -0.68
RNF4-222ENST00000541204 RSRP1Q9BUV0 290 aa10.78□□□□□ -0.68
RNF4-222ENST00000541204 B4GALT7Q9UBV7 327 aa10.78□□□□□ -0.68
RNF4-222ENST00000541204 LAMA5O15230 3695 aa10.78□□□□□ -0.68
RNF4-222ENST00000541204 A0A1W2PPE2 198 aa10.77□□□□□ -0.68
RNF4-222ENST00000541204 TERTO14746 1132 aaKnown RBP10.77□□□□□ -0.68
RNF4-222ENST00000541204 HLA-HP01893 362 aa10.77□□□□□ -0.68
RNF4-222ENST00000541204 IL13RA2Q14627 380 aa10.77□□□□□ -0.68
RNF4-222ENST00000541204 LHFPL2Q6ZUX7 228 aa10.77□□□□□ -0.68
RNF4-222ENST00000541204 TMEM251Q8N6I4 163 aa10.77□□□□□ -0.68
RNF4-222ENST00000541204 CPEB3Q8NE35 698 aaKnown RBP10.77□□□□□ -0.68
RNF4-222ENST00000541204 FAM213BQ8TBF2 198 aa10.77□□□□□ -0.68
RNF4-222ENST00000541204 SYT3Q9BQG1 590 aa10.77□□□□□ -0.68
RNF4-222ENST00000541204 TMEM9BQ9NQ34 198 aa10.77□□□□□ -0.68
RNF4-222ENST00000541204 ABI3Q9P2A4 366 aa10.77□□□□□ -0.68
RNF4-222ENST00000541204 PCNX2A6NKB5 2137 aa10.77□□□□□ -0.68
RNF4-222ENST00000541204 BOD1L1Q8NFC6 3051 aa10.77□□□□□ -0.68
RNF4-222ENST00000541204 KIAA1549Q9HCM3 1950 aa10.77□□□□□ -0.69
RNF4-222ENST00000541204 C21orf140B9A014 251 aa10.77□□□□□ -0.69
RNF4-222ENST00000541204 RAB5AP20339 215 aa10.77□□□□□ -0.69
RNF4-222ENST00000541204 AADACP22760 399 aa10.77□□□□□ -0.69
RNF4-222ENST00000541204 GLP1RP43220 463 aa10.77□□□□□ -0.69
RNF4-222ENST00000541204 SULT1A1P50225 295 aa10.77□□□□□ -0.69
RNF4-222ENST00000541204 ARF1P84077 181 aaKnown RBP10.77□□□□□ -0.69
RNF4-222ENST00000541204 ADAM5Q6NVV9 412 aa10.77□□□□□ -0.69
RNF4-222ENST00000541204 PIGCQ92535 297 aa10.77□□□□□ -0.69
RNF4-222ENST00000541204 MOB3AQ96BX8 217 aa10.77□□□□□ -0.69
RNF4-222ENST00000541204 BCO1Q9HAY6 547 aa10.77□□□□□ -0.69
RNF4-222ENST00000541204 ZNF286AQ9HBT8 521 aa10.77□□□□□ -0.69
RNF4-222ENST00000541204 KCNJ16Q9NPI9 418 aa10.77□□□□□ -0.69
RNF4-222ENST00000541204 OR6C6A6NF89 314 aa10.77□□□□□ -0.69
RNF4-222ENST00000541204 ARGFXA6NJG6 315 aa10.77□□□□□ -0.69
RNF4-222ENST00000541204 ZNF587BE7ETH6 402 aa10.77□□□□□ -0.69
RNF4-222ENST00000541204 GPR37O15354 613 aa10.77□□□□□ -0.69
RNF4-222ENST00000541204 CLDN18P56856 261 aa10.77□□□□□ -0.69
RNF4-222ENST00000541204 OR2B8PP59922 312 aa10.77□□□□□ -0.69
RNF4-222ENST00000541204 CLINT1Q14677 625 aa10.77□□□□□ -0.69
RNF4-222ENST00000541204 ASCL4Q6XD76 172 aa10.77□□□□□ -0.69
RNF4-222ENST00000541204 TMPRSS7Q7RTY8 843 aa10.77□□□□□ -0.69
RNF4-222ENST00000541204 SUMF1Q8NBK3 374 aa10.77□□□□□ -0.69
RNF4-222ENST00000541204 RARRES2Q99969 163 aa10.77□□□□□ -0.69
RNF4-222ENST00000541204 DEFB127Q9H1M4 99 aa10.77□□□□□ -0.69
RNF4-222ENST00000541204 SLC35B3Q9H1N7 401 aa10.77□□□□□ -0.69
RNF4-222ENST00000541204 TUBA4BQ9H853 241 aa10.77□□□□□ -0.69
RNF4-222ENST00000541204 DOCK7Q96N67 2140 aa10.76□□□□□ -0.69
RNF4-222ENST00000541204 CNOT1A5YKK6 2376 aaKnown RBP10.76□□□□□ -0.69
RNF4-222ENST00000541204 S100A9P06702 114 aaKnown RBP10.76□□□□□ -0.69
RNF4-222ENST00000541204 EWSR1Q01844 656 aaKnown RBP eCLIP10.76□□□□□ -0.696e-6■□□□□ 9.2
RNF4-222ENST00000541204 GNMTQ14749 295 aa10.76□□□□□ -0.69
RNF4-222ENST00000541204 IGSF11Q5DX21 431 aa10.76□□□□□ -0.69
RNF4-222ENST00000541204 C5orf24Q7Z6I8 188 aa10.76□□□□□ -0.69
RNF4-222ENST00000541204 OR4D5Q8NGN0 318 aa10.76□□□□□ -0.69
RNF4-222ENST00000541204 LOXL4Q96JB6 756 aa10.76□□□□□ -0.69
RNF4-222ENST00000541204 STRAPQ9Y3F4 350 aaKnown RBP10.76□□□□□ -0.69
RNF4-222ENST00000541204 FAM24AA6NFZ4 105 aa10.76□□□□□ -0.69
RNF4-222ENST00000541204 LINC00587B1AMM8 73 aa10.76□□□□□ -0.69
RNF4-222ENST00000541204 S100A8P05109 93 aa10.76□□□□□ -0.69
RNF4-222ENST00000541204 SMIM6P0DI80 62 aa10.76□□□□□ -0.69
RNF4-222ENST00000541204 LMO1P25800 156 aa10.76□□□□□ -0.69
RNF4-222ENST00000541204 RAB5CP51148 216 aa10.76□□□□□ -0.69
RNF4-222ENST00000541204 HERV-K104P61576 105 aa10.76□□□□□ -0.69
RNF4-222ENST00000541204 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.76□□□□□ -0.69
RNF4-222ENST00000541204 VASH2Q86V25 355 aa10.76□□□□□ -0.69
RNF4-222ENST00000541204 BOD1Q96IK1 185 aa10.76□□□□□ -0.69
RNF4-222ENST00000541204 ABHD14AQ9BUJ0 271 aa10.76□□□□□ -0.69
RNF4-222ENST00000541204 PBDC1Q9BVG4 233 aa10.76□□□□□ -0.69
RNF4-222ENST00000541204 C12orf49Q9H741 205 aa10.76□□□□□ -0.69
RNF4-222ENST00000541204 ZNF442Q9H7R0 627 aa10.76□□□□□ -0.69
RNF4-222ENST00000541204 LIPGQ9Y5X9 500 aa10.76□□□□□ -0.69
RNF4-222ENST00000541204 C3orf85A0A1B0GTC6 90 aa10.75□□□□□ -0.69
RNF4-222ENST00000541204 NKX2-6A6NCS4 301 aa10.75□□□□□ -0.69
RNF4-222ENST00000541204 SYNGR4O95473 234 aa10.75□□□□□ -0.69
RNF4-222ENST00000541204 NQO2P16083 231 aa10.75□□□□□ -0.69
RNF4-222ENST00000541204 OMGP23515 440 aa10.75□□□□□ -0.69
RNF4-222ENST00000541204 MEOX1P50221 254 aa10.75□□□□□ -0.69
RNF4-222ENST00000541204 MALLQ13021 153 aa10.75□□□□□ -0.69
RNF4-222ENST00000541204 SRSF6Q13247 344 aaKnown RBP10.75□□□□□ -0.69
RNF4-222ENST00000541204 PLCXD3Q63HM9 321 aa10.75□□□□□ -0.69
RNF4-222ENST00000541204 KDF1Q8NAX2 398 aaPredicted RBP10.75□□□□□ -0.69
RNF4-222ENST00000541204 OR1J1Q8NGS3 322 aa10.75□□□□□ -0.69
RNF4-222ENST00000541204 OR51B6Q9H340 312 aa10.75□□□□□ -0.69
RNF4-222ENST00000541204 TMED3Q9Y3Q3 217 aa10.75□□□□□ -0.69
RNF4-222ENST00000541204 PUS1Q9Y606 427 aaKnown RBP eCLIP10.75□□□□□ -0.69
RNF4-222ENST00000541204 ZNF503-AS2A6NEH8 195 aa10.75□□□□□ -0.69
RNF4-222ENST00000541204 K7N7A8 449 aa10.75□□□□□ -0.69
RNF4-222ENST00000541204 PDCD6O75340 191 aa10.75□□□□□ -0.69
RNF4-222ENST00000541204 OR7C1O76099 320 aaPredicted RBP10.75□□□□□ -0.69
RNF4-222ENST00000541204 PPYP01298 95 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms