RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 CACNA1DQ01668 2161 aa10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 ATXN7L3Q14CW9 347 aaPredicted RBP10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 ADIPOQQ15848 244 aa10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 PAN3Q58A45 887 aaKnown RBP10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 TMEM108Q6UXF1 575 aa10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 MOGAT3Q86VF5 341 aa10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 C12orf45Q8N5I9 185 aaPredicted RBP10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 NUP37Q8NFH4 326 aa10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 GRPEL2Q8TAA5 225 aa10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 CCDC107Q8WV48 283 aa10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 ATP23Q9Y6H3 246 aa10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 IGSF10Q6WRI0 2623 aa10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 PRSS44E7EML9 344 aa10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 SIAH2O43255 324 aa10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 IGHV1-46P01743 117 aa10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 FCGR2CP31995 323 aa10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 DHODHQ02127 395 aa10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 GRK1Q15835 563 aa10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 FAM201AQ5SY85 155 aa10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 ZNF880Q6PDB4 577 aa10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 DHRS11Q6UWP2 260 aa10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 Q8IYB0 196 aa10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 ZCCHC24Q8N2G6 241 aaKnown RBP10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 SPERTQ8NA61 448 aa10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 OR5T2Q8NGG2 359 aa10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 UBALD1Q8TB05 177 aa10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 CASTOR1Q8WTX7 329 aa10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 TMEM165Q9HC07 324 aa10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 NECAP2Q9NVZ3 263 aa10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 DCAF16Q9NXF7 216 aa10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 TREM2Q9NZC2 230 aa10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 ROS1P08922 2347 aa10.32□□□□□ -0.76
AP003559.1-201ENST00000540906 ADGRG4Q8IZF6 3080 aa10.32□□□□□ -0.76
AP003559.1-201ENST00000540906 IGHV3OR15-7A0A075B7D8 119 aa10.32□□□□□ -0.76
AP003559.1-201ENST00000540906 FAM172BPA6NC97 362 aa10.32□□□□□ -0.76
AP003559.1-201ENST00000540906 SHISA9B4DS77 424 aa10.32□□□□□ -0.76
AP003559.1-201ENST00000540906 OR2A4O95047 310 aa10.32□□□□□ -0.76
AP003559.1-201ENST00000540906 PLAUP00749 431 aa10.32□□□□□ -0.76
AP003559.1-201ENST00000540906 AADACP22760 399 aa10.32□□□□□ -0.76
AP003559.1-201ENST00000540906 VAMP1P23763 118 aa10.32□□□□□ -0.76
AP003559.1-201ENST00000540906 CHRNB4P30926 498 aa10.32□□□□□ -0.76
AP003559.1-201ENST00000540906 UQCRFS1P47985 274 aa10.32□□□□□ -0.76
AP003559.1-201ENST00000540906 FXYD4P59646 89 aa10.32□□□□□ -0.76
AP003559.1-201ENST00000540906 SNRPD2P62316 118 aaKnown RBP10.32□□□□□ -0.76
AP003559.1-201ENST00000540906 SLC9A3R2Q15599 337 aa10.32□□□□□ -0.76
AP003559.1-201ENST00000540906 Q6ZS49 121 aa10.32□□□□□ -0.76
AP003559.1-201ENST00000540906 LDLRAD3Q86YD5 345 aa10.32□□□□□ -0.76
AP003559.1-201ENST00000540906 GCSAMQ8N6F7 178 aa10.32□□□□□ -0.76
AP003559.1-201ENST00000540906 CD177Q8N6Q3 437 aa10.32□□□□□ -0.76
AP003559.1-201ENST00000540906 BOLLQ8N9W6 283 aaKnown RBP10.32□□□□□ -0.76
AP003559.1-201ENST00000540906 TOMM40LQ969M1 308 aa10.32□□□□□ -0.76
AP003559.1-201ENST00000540906 OR2A7Q96R45 310 aa10.32□□□□□ -0.76
AP003559.1-201ENST00000540906 RHOFQ9HBH0 211 aa10.32□□□□□ -0.76
AP003559.1-201ENST00000540906 DECR2Q9NUI1 292 aa10.32□□□□□ -0.76
AP003559.1-201ENST00000540906 RFPL4AA6NLU0 287 aa10.31□□□□□ -0.76
AP003559.1-201ENST00000540906 RFPL4AL1F8VTS6 287 aa10.31□□□□□ -0.76
AP003559.1-201ENST00000540906 OR4A8P0C604 315 aa10.31□□□□□ -0.76
AP003559.1-201ENST00000540906 SFTPCP11686 197 aa10.31□□□□□ -0.76
AP003559.1-201ENST00000540906 PGAM2P15259 253 aa10.31□□□□□ -0.76
AP003559.1-201ENST00000540906 CD34P28906 385 aa10.31□□□□□ -0.76
AP003559.1-201ENST00000540906 ZNF81P51508 661 aa10.31□□□□□ -0.76
AP003559.1-201ENST00000540906 RPS23P62266 143 aaKnown RBP10.31□□□□□ -0.76
AP003559.1-201ENST00000540906 ANKRD55Q3KP44 614 aa10.31□□□□□ -0.76
AP003559.1-201ENST00000540906 NCMAPQ5T1S8 102 aa10.31□□□□□ -0.76
AP003559.1-201ENST00000540906 C1QTNF12Q5T7M4 302 aa10.31□□□□□ -0.76
AP003559.1-201ENST00000540906 FAM53AQ6NSI3 398 aaPredicted RBP10.31□□□□□ -0.76
AP003559.1-201ENST00000540906 TMEM17Q86X19 198 aa10.31□□□□□ -0.76
AP003559.1-201ENST00000540906 C9orf62Q8N4C0 152 aa10.31□□□□□ -0.76
AP003559.1-201ENST00000540906 TMEM185AQ8NFB2 350 aa10.31□□□□□ -0.76
AP003559.1-201ENST00000540906 OR2T35Q8NGX2 323 aa10.31□□□□□ -0.76
AP003559.1-201ENST00000540906 MITD1Q8WV92 249 aa10.31□□□□□ -0.76
AP003559.1-201ENST00000540906 PLPPR2Q96GM1 343 aa10.31□□□□□ -0.76
AP003559.1-201ENST00000540906 SPACA1Q9HBV2 294 aa10.31□□□□□ -0.76
AP003559.1-201ENST00000540906 TRBV6-6A0A0A6YYG2 114 aa10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 TRDCB7Z8K6 153 aa10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 E7EQL1 145 aa10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 SLC22A5O76082 557 aa10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 KNG1P01042 644 aa10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 PPP3CBP16298 524 aa10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 FBXL19-AS1Q494R0 122 aa10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 SPIN3Q5JUX0 258 aa10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 CLEC18BQ6UXF7 455 aa10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 ZNF497Q6ZNH5 498 aa10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 GAPTQ8N292 157 aa10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 OR11L1Q8NGX0 322 aa10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 LILRB4Q8NHJ6 448 aa10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 RNASE6Q93091 150 aaKnown RBP10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 DIDO1Q9BTC0 2240 aaKnown RBP10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 IGKV1D-17A0A075B6S4 117 aa10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 IGKV1D-13A0A0B4J2D9 117 aa10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 PLSCR5A0PG75 271 aa10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 MEX3AA1L020 520 aaKnown RBP10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 SRRM5B3KS81 715 aa10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 SH2D1BO14796 132 aa10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 BET1O15155 118 aa10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 SFT2D2O95562 160 aa10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 GLAP06280 429 aa10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 GIPP09681 153 aaPredicted RBP10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 IGKV1-13P0DP09 117 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms