RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 C17orf82Q86X59 251 aaPredicted RBP8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 DYRK2Q92630 601 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 EMG1Q92979 244 aaKnown RBP8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 TMEM56Q96MV1 263 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 ZNF681Q96N22 645 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 MACROD1Q9BQ69 325 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 SLC2A9Q9NRM0 540 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 LYRM2Q9NU23 88 aaPredicted RBP8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 ANAPC10Q9UM13 185 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 C14orf166Q9Y224 244 aaKnown RBP8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 WIPI2Q9Y4P8 454 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 TMEM56-RWDD3S4R434 201 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 ZNF318Q5VUA4 2279 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 AQP7P3A6NL99 342 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 AHRRA9YTQ3 701 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 C4orf51C9J302 202 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 OR6A2O95222 327 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 HBE1P02100 147 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 CT45A8P0DMV1 189 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 CT45A9P0DMV2 189 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 BMP5P22003 454 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 EPHA8P29322 1005 aaPredicted RBP8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 DNASE1L1P49184 302 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 HNRNPA3P51991 378 aaKnown RBP8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 MFGE8Q08431 387 aaPredicted RBP8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 SQSTM1Q13501 440 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 CT45A2Q5DJT8 189 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 SLC23A3Q6PIS1 610 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 LYPD6Q86Y78 171 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 D2HGDHQ8N465 521 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 CISD2Q8N5K1 135 aaKnown RBP8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 OR5L1Q8NGL2 311 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 OR2V1Q8NHB1 315 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 SAP25Q8TEE9 199 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 BCL2L2Q92843 193 aaPredicted RBP8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 GPR146Q96CH1 333 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 CYYR1Q96J86 154 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 PLK3Q9H4B4 646 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 HRASLS2Q9NWW9 162 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 HSPB2A8KAH6 182 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 H7BYZ3 331 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 H7C1C5 153 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 DBHP09172 617 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 VSIG8P0DPA2 414 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 GCH1P30793 250 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 MPLP40238 635 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 RIPPLY3P57055 190 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 RAB38P57729 211 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 LCN6P62502 163 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 QRFPP83859 136 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 EWSR1Q01844 656 aaKnown RBP eCLIP8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 ID2Q02363 134 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 SLC17A1Q14916 467 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 HSPB2Q16082 182 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 MEP1BQ16820 701 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 FCRL6Q6DN72 434 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 Q6ZN92 141 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 FBXL14Q8N1E6 418 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 CMTM2Q8TAZ6 248 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 NICN1Q9BSH3 213 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 UQCR10Q9UDW1 63 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 VSTM2BA6NLU5 285 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 ZFP92A6NM28 416 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 NPIPA2E9PIF3 369 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 CYR61O00622 381 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 HRASP01112 189 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 TNFSF4P23510 183 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 COMPP49747 757 aaPredicted RBP8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 HINT1P49773 126 aaPredicted RBP8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 PPP1CAP62136 330 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 NHLH1Q02575 133 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 ZNF266Q14584 549 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 EXOSC7Q15024 291 aaKnown RBP8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 DCST2Q5T1A1 773 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 PRAMEF20Q5VT98 475 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 SAXO1Q8IYX7 474 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 OR4B1Q8NGF8 309 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 FLVCR1-AS1Q8TAF5 88 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 TXN2Q99757 166 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 LPAR5Q9H1C0 372 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 MKKSQ9NPJ1 570 aaPredicted RBP8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 CISD1Q9NZ45 108 aaKnown RBP8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 LRIT1Q9P2V4 623 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 TMEM14AQ9Y6G1 99 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 ZNF780BQ9Y6R6 833 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 ASXL3Q9C0F0 2248 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 ALPK2Q86TB3 2170 aa8.23□□□□□ -1.09
CTNNA1-243ENST00000540387 SCN2AQ99250 2005 aa8.22□□□□□ -1.09
CTNNA1-243ENST00000540387 ERI3O43414 337 aaKnown RBP8.22□□□□□ -1.09
CTNNA1-243ENST00000540387 TYMSP04818 313 aa8.22□□□□□ -1.09
CTNNA1-243ENST00000540387 AMY2BP19961 511 aa8.22□□□□□ -1.09
CTNNA1-243ENST00000540387 HIST1H1TP22492 207 aaPredicted RBP8.22□□□□□ -1.09
CTNNA1-243ENST00000540387 ARR3P36575 388 aa8.22□□□□□ -1.09
CTNNA1-243ENST00000540387 CTRLP40313 264 aa8.22□□□□□ -1.09
CTNNA1-243ENST00000540387 BIDP55957 195 aa8.22□□□□□ -1.09
CTNNA1-243ENST00000540387 RPS20P60866 119 aaKnown RBP8.22□□□□□ -1.09
CTNNA1-243ENST00000540387 CSNK1G2P78368 415 aa8.22□□□□□ -1.09
CTNNA1-243ENST00000540387 BTN3A2P78410 334 aa8.22□□□□□ -1.09
CTNNA1-243ENST00000540387 IL13RA2Q14627 380 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms