RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 KCNMB2Q9Y691 235 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 SEC16AO15027 2179 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 COX7A1P24310 79 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 UCNP55089 124 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 VAMP3Q15836 100 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 SFTPA2Q8IWL1 248 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 PLPPR2Q96GM1 343 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 NEURL2Q9BR09 285 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 PARD6AQ9NPB6 346 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 TMEM38BQ9NVV0 291 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 ZMIZ1Q9ULJ6 1067 aa5.71□□□□□ -1.5
LSAMP-207ENST00000539563 PCDHGA9Q9Y5G4 932 aaKnown RBP5.71□□□□□ -1.5
LSAMP-207ENST00000539563 KNTC1P50748 2209 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 A0A1B0GTH9 108 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 HOXB3P14651 431 aaPredicted RBP5.7□□□□□ -1.5
LSAMP-207ENST00000539563 ETFDHQ16134 617 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 DOLPP1Q86YN1 238 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 OR4D11Q8NGI4 311 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 SP7Q8TDD2 431 aaPredicted RBP5.7□□□□□ -1.5
LSAMP-207ENST00000539563 PTPMT1Q8WUK0 201 aaPredicted RBP5.7□□□□□ -1.5
LSAMP-207ENST00000539563 FLRT3Q9NZU0 649 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 NAT8Q9UHE5 227 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 PRNDQ9UKY0 176 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 A0A1B0GU03 582 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 FFAR1O14842 300 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 TCAPO15273 167 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 SOCS1O15524 211 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 USF1P22415 310 aaPredicted RBP5.7□□□□□ -1.5
LSAMP-207ENST00000539563 HNRNPA3P51991 378 aaKnown RBP5.7□□□□□ -1.5
LSAMP-207ENST00000539563 TMEM183BQ1AE95 376 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 C11orf42Q8N5U0 333 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 ZNF441Q8N8Z8 693 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 WDR31Q8NA23 367 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 SEC11CQ9BY50 192 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 OR2H1Q9GZK4 316 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 NAT8BQ9UHF3 227 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 RBFOX3A6NFN3 312 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 FAM24AA6NFZ4 105 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 BGLAPP02818 100 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 ORM2P19652 201 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 SELENOPP49908 381 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 SRSF5Q13243 272 aaKnown RBP5.7□□□□□ -1.5
LSAMP-207ENST00000539563 LYRM7Q5U5X0 104 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 TUSC5Q8IXB3 177 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 Q8WTZ3 238 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 PTX4Q96A99 478 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 HEXA-AS1Q9H8Q6 139 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 VAX2Q9UIW0 290 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 OPN1MWP04001 364 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 MMP7P09237 267 aaPredicted RBP5.7□□□□□ -1.5
LSAMP-207ENST00000539563 OPN1MW2P0DN77 364 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 OPN1MW3P0DN78 364 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 G0S2P27469 103 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 LSM11P83369 360 aaKnown RBP eCLIP5.7□□□□□ -1.5
LSAMP-207ENST00000539563 TNXAQ16473 311 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 EIF4E3Q8N5X7 224 aaKnown RBP5.7□□□□□ -1.5
LSAMP-207ENST00000539563 SLC25A22Q9H936 323 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 WDR81Q562E7 1941 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 DUXBA0A1W2PPF3 345 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 J3QT63 122 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 GEMIN2O14893 280 aaKnown RBP5.7□□□□□ -1.5
LSAMP-207ENST00000539563 LYZP61626 148 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 GTF2H5Q6ZYL4 71 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 SLC26A10Q8NG04 563 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 LOXL4Q96JB6 756 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 RAB33BQ9H082 229 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 RNF122Q9H9V4 155 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 UBTD1Q9HAC8 227 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 ZNF71Q9NQZ8 489 aaPredicted RBP5.7□□□□□ -1.5
LSAMP-207ENST00000539563 HEATR5BQ9P2D3 2071 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 IGHV3-43A0A0B4J1X8 118 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 SYNGR2O43760 224 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 PDE6DO43924 150 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 SEMA7AO75326 666 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 PPYP01298 95 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 IGHV3-43DP0DP04 118 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 VDAC1P21796 283 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 HTR1DP28221 377 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 RPL30P62888 115 aaKnown RBP5.7□□□□□ -1.5
LSAMP-207ENST00000539563 GAB4Q2WGN9 574 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 DPPA3Q6W0C5 159 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 GYPAP02724 150 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 CD1AP06126 327 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 UBALD1Q8TB05 177 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 TMEM204Q9BSN7 226 aa5.7□□□□□ -1.5
LSAMP-207ENST00000539563 A0A0U1RQV5 110 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 RPL36A-HNRNPH2H7BZ11 118 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 IFI6P09912 130 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 TMEM33P57088 247 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 NHLH1Q02575 133 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 NHLH2Q02577 135 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 KHDC3LQ587J8 217 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 ZNF721Q8TF20 911 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 FSCN3Q9NQT6 498 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 NEU3Q9UQ49 428 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 F2RL2O00254 374 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 CHST1O43916 411 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 CCL3P10147 92 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 CCL4P13236 92 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 PEBP1P30086 187 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms