RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 PNLDC1Q8NA58 520 aaKnown RBP7.58□□□□□ -1.2
DDB1-213ENST00000539332 CSNK2A3Q8NEV1 391 aa7.58□□□□□ -1.2
DDB1-213ENST00000539332 OR56B2PQ8NGI1 322 aa7.58□□□□□ -1.2
DDB1-213ENST00000539332 KCNG3Q8TAE7 436 aa7.58□□□□□ -1.2
DDB1-213ENST00000539332 FAM46BQ96A09 425 aa7.58□□□□□ -1.2
DDB1-213ENST00000539332 PHB2Q99623 299 aa7.58□□□□□ -1.2
DDB1-213ENST00000539332 EGLN1Q9GZT9 426 aa7.58□□□□□ -1.2
DDB1-213ENST00000539332 LPAR5Q9H1C0 372 aa7.58□□□□□ -1.2
DDB1-213ENST00000539332 ATG5Q9H1Y0 275 aa7.58□□□□□ -1.2
DDB1-213ENST00000539332 TRAV18A0A075B6X5 111 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 TRBV6-7A0A0A0MS04 114 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 A0A0A6YYD4 124 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 A0A1W2PR80 420 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 OR5H1A6NKK0 313 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 FOXI3A8MTJ6 420 aaPredicted RBP7.57□□□□□ -1.2
DDB1-213ENST00000539332 SSX5O60225 188 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 CDC14BO60729 498 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 SMPD2O60906 423 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 EIF3GO75821 320 aaKnown RBP eCLIP7.57□□□□□ -1.2
DDB1-213ENST00000539332 CD3DP04234 171 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 CELA3BP08861 270 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 PTHLHP12272 177 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 CHRNB4P30926 498 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 PMELP40967 661 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 HCFC1P51610 2035 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 TAS2R31P59538 309 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 FAM27E3Q08E93 113 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 FAM189A2Q15884 450 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 C3orf36Q3SXR2 165 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 ZNF260Q3ZCT1 412 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 C1QL2Q7Z5L3 287 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 LYG2Q86SG7 212 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 BAP18Q8IXM2 172 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 ZNF843Q8N446 348 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 TMEM104Q8NE00 496 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 AQP3Q92482 292 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 ZDHHC16Q969W1 377 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 S100PBPQ96BU1 408 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 PIK3IP1Q96FE7 263 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 TM2D1Q9BX74 207 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 TMEM59Q9BXS4 323 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.57□□□□□ -1.2
DDB1-213ENST00000539332 UQCC1Q9NVA1 299 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 ELOVL5Q9NYP7 299 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 IL36GQ9NZH8 169 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 AMDHD2Q9Y303 409 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 NOP16Q9Y3C1 178 aaKnown RBP7.57□□□□□ -1.2
DDB1-213ENST00000539332 COL12A1Q99715 3063 aa7.57□□□□□ -1.2
DDB1-213ENST00000539332 C1QL1O75973 258 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 CYB5AP00167 134 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 CHRM2P08172 466 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 ACAA1P09110 424 aaPredicted RBP7.56□□□□□ -1.2
DDB1-213ENST00000539332 ADCYAP1P18509 176 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 RBP2P50120 134 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 IDH3GP51553 393 aaPredicted RBP7.56□□□□□ -1.2
DDB1-213ENST00000539332 FUT6P51993 359 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 SSTP61278 116 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 DHRS2Q13268 280 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 ATPAF1Q5TC12 328 aaPredicted RBP7.56□□□□□ -1.2
DDB1-213ENST00000539332 ZNF600Q6ZNG1 722 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 MRPL21Q7Z2W9 205 aaKnown RBP7.56□□□□□ -1.2
DDB1-213ENST00000539332 SLC25A42Q86VD7 318 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 TMEM200AQ86VY9 491 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 ZNF561Q8N587 486 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 OR5AP2Q8NGF4 316 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 OR5L1Q8NGL2 311 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 RXFP4Q8TDU9 374 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 NPRL2Q8WTW4 380 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 MITD1Q8WV92 249 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 PPP1R1CQ8WVI7 109 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 SEH1LQ96EE3 360 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 GPER1Q99527 375 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 FGF23Q9GZV9 251 aaPredicted RBP7.56□□□□□ -1.2
DDB1-213ENST00000539332 CST11Q9H112 138 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 SEBOXQ9HB31 216 aaPredicted RBP7.56□□□□□ -1.2
DDB1-213ENST00000539332 TREM1Q9NP99 234 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 GSN-AS1Q9NRJ2 163 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 CRIM1Q9NZV1 1036 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 METTL1Q9UBP6 276 aaKnown RBP7.56□□□□□ -1.2
DDB1-213ENST00000539332 SLC25A15Q9Y619 301 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 CHD3Q12873 2000 aaKnown RBP7.56□□□□□ -1.2
DDB1-213ENST00000539332 A0A1W2PP11 408 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 C5orf52A6NGY3 159 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 CD300LBA8K4G0 201 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 LINC00587B1AMM8 73 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 ZNF736B4DX44 427 aaPredicted RBP7.56□□□□□ -1.2
DDB1-213ENST00000539332 C16orf97H3BN30 126 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 HLA-AP01891 365 aaKnown RBP7.56□□□□□ -1.2
DDB1-213ENST00000539332 TBPP20226 339 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 CCNOP22674 350 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 TUBG1P23258 451 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 CCKARP32238 428 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 KCNJ3P48549 501 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 UBE2MP61081 183 aaKnown RBP7.56□□□□□ -1.2
DDB1-213ENST00000539332 C4orf17Q53FE4 359 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 TIMM23BQ5SRD1 257 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 TMED4Q7Z7H5 227 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 ZSCAN4Q8NAM6 433 aaPredicted RBP7.56□□□□□ -1.2
DDB1-213ENST00000539332 ACBD4Q8NC06 268 aa7.56□□□□□ -1.2
DDB1-213ENST00000539332 Q8NFD4 153 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms