RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 PLET1Q6UQ28 207 aa3.05□□□□□ -1.92
PTPN22-211ENST00000538253 AHSA2Q719I0 299 aa3.05□□□□□ -1.92
PTPN22-211ENST00000538253 TMEM179BQ7Z7N9 219 aa3.05□□□□□ -1.92
PTPN22-211ENST00000538253 FOXRED2Q8IWF2 684 aa3.05□□□□□ -1.92
PTPN22-211ENST00000538253 KIR3DL3Q8N743 410 aa3.05□□□□□ -1.92
PTPN22-211ENST00000538253 KCNG3Q8TAE7 436 aa3.05□□□□□ -1.92
PTPN22-211ENST00000538253 NPRL2Q8WTW4 380 aa3.05□□□□□ -1.92
PTPN22-211ENST00000538253 FBLIM1Q8WUP2 373 aa3.05□□□□□ -1.92
PTPN22-211ENST00000538253 FAM46BQ96A09 425 aa3.05□□□□□ -1.92
PTPN22-211ENST00000538253 KCTD12Q96CX2 325 aaKnown RBP3.05□□□□□ -1.92
PTPN22-211ENST00000538253 TMPRSS5Q9H3S3 457 aa3.05□□□□□ -1.92
PTPN22-211ENST00000538253 DUSP21Q9H596 190 aa3.05□□□□□ -1.92
PTPN22-211ENST00000538253 RAB18Q9NP72 206 aa3.05□□□□□ -1.92
PTPN22-211ENST00000538253 GPR84Q9NQS5 396 aa3.05□□□□□ -1.92
PTPN22-211ENST00000538253 PIGLQ9Y2B2 252 aa3.05□□□□□ -1.92
PTPN22-211ENST00000538253 AMMECR1Q9Y4X0 333 aaPredicted RBP3.05□□□□□ -1.92
PTPN22-211ENST00000538253 V9GYS6 101 aa3.05□□□□□ -1.92
PTPN22-211ENST00000538253 TLN1Q9Y490 2541 aaKnown RBP3.05□□□□□ -1.92
PTPN22-211ENST00000538253 GTF3C1Q12789 2109 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 A0A1W2PQL4 384 aaPredicted RBP3.04□□□□□ -1.92
PTPN22-211ENST00000538253 hADV38S2A0JD32 116 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 FAM183AA6NL82 134 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 TSTD3H0UI37 97 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 TNFRSF6BO95407 300 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 RBP4P02753 201 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 MRPL3P09001 348 aaKnown RBP3.04□□□□□ -1.92
PTPN22-211ENST00000538253 CALCBP10092 127 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 ARSBP15848 533 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 HIST1H1BP16401 226 aaKnown RBP3.04□□□□□ -1.92
PTPN22-211ENST00000538253 PVALBP20472 110 aaPredicted RBP3.04□□□□□ -1.92
PTPN22-211ENST00000538253 SERPINA2P20848 420 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 GRNP28799 593 aaKnown RBP3.04□□□□□ -1.92
PTPN22-211ENST00000538253 GABRA5P31644 462 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 PSMB10P40306 273 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 PMELP40967 661 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 CRYBA4P53673 196 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 PTTG1IPP53801 180 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 IL13RA1P78552 427 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 FABP9Q0Z7S8 132 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 PPP1R8Q12972 351 aaKnown RBP3.04□□□□□ -1.92
PTPN22-211ENST00000538253 TPBGQ13641 420 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 RSU1Q15404 277 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 PYY3Q5JQD4 70 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 AVPI1Q5T686 147 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 GPR157Q5UAW9 335 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 C11orf71Q6IPW1 123 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 CLEC9AQ6UXN8 241 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 NAA40Q86UY6 237 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 ZNF295-AS1Q8N0V1 137 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 OR2D3Q8NGH3 330 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 OR13F1Q8NGS4 319 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 MITD1Q8WV92 249 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 TCTEX1D2Q8WW35 142 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 C18orf12Q96KH6 178 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 C4orf36Q96KX1 117 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 SYT3Q9BQG1 590 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 PRO1933Q9H354 126 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 FAM206AQ9NX38 181 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 KCNIP1Q9NZI2 227 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 OR6C3Q9NZP0 311 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 CDC42EP3Q9UKI2 254 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 MKI67P46013 3256 aaKnown RBP3.04□□□□□ -1.92
PTPN22-211ENST00000538253 DNAJC13O75165 2243 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 HELTA6NFD8 242 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 SPRY3O43610 288 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 PLPP2O43688 288 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 CSF1P09603 554 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 HLA-DMAP28067 261 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 MAS1LP35410 378 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 SRP14P37108 136 aaKnown RBP3.04□□□□□ -1.92
PTPN22-211ENST00000538253 GDNFP39905 211 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 MTCP1P56278 107 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 PITPNAQ00169 270 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 EXOSC2Q13868 293 aaKnown RBP3.04□□□□□ -1.92
PTPN22-211ENST00000538253 CDNFQ49AH0 187 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 GLYATL3Q5SZD4 288 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 TMEM236Q5W0B7 351 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 LEMD1Q68G75 181 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 OR2T2Q6IF00 324 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 ZGRF1Q86YA3 2104 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 EIF4E3Q8N5X7 224 aaKnown RBP3.04□□□□□ -1.92
PTPN22-211ENST00000538253 PARP16Q8N5Y8 322 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 OR8B12Q8NGG6 310 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 OR51L1Q8NGJ5 315 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 C10orf105Q8TEF2 133 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 ZNF418Q8TF45 676 aaPredicted RBP3.04□□□□□ -1.92
PTPN22-211ENST00000538253 SAT2Q96F10 170 aaPredicted RBP3.04□□□□□ -1.92
PTPN22-211ENST00000538253 KCTD7Q96MP8 289 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 TSSK2Q96PF2 358 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 NEDD4LQ96PU5 975 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 TMED9Q9BVK6 235 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 NKX6-2Q9C056 277 aaPredicted RBP3.04□□□□□ -1.92
PTPN22-211ENST00000538253 EXOSC4Q9NPD3 245 aaKnown RBP3.04□□□□□ -1.92
PTPN22-211ENST00000538253 IL36GQ9NZH8 169 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 METTL1Q9UBP6 276 aaKnown RBP3.04□□□□□ -1.92
PTPN22-211ENST00000538253 KAAG1Q9UBP8 84 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 STRAPQ9Y3F4 350 aaKnown RBP3.04□□□□□ -1.92
PTPN22-211ENST00000538253 ETV7Q9Y603 341 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 NCOA6Q14686 2063 aaPredicted RBP3.04□□□□□ -1.92
PTPN22-211ENST00000538253 LOC100509620A0A075B734 347 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms