RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 DOC2BQ14184 412 aa6.09□□□□□ -1.43
MSH6-209ENST00000538136 OR56B4Q8NH76 319 aa6.09□□□□□ -1.43
MSH6-209ENST00000538136 OR10J5Q8NHC4 309 aa6.09□□□□□ -1.43
MSH6-209ENST00000538136 CHST5Q9GZS9 411 aa6.09□□□□□ -1.43
MSH6-209ENST00000538136 AUNIPQ9H7T9 357 aa6.09□□□□□ -1.43
MSH6-209ENST00000538136 GNB4Q9HAV0 340 aa6.09□□□□□ -1.43
MSH6-209ENST00000538136 FGF20Q9NP95 211 aaPredicted RBP6.09□□□□□ -1.43
MSH6-209ENST00000538136 ZNF222Q9UK12 451 aa6.09□□□□□ -1.43
MSH6-209ENST00000538136 IGHV3-48P01763 117 aa6.09□□□□□ -1.43
MSH6-209ENST00000538136 DEFA4P12838 97 aa6.09□□□□□ -1.43
MSH6-209ENST00000538136 FUT3P21217 361 aa6.09□□□□□ -1.43
MSH6-209ENST00000538136 FCGR2CP31995 323 aa6.09□□□□□ -1.43
MSH6-209ENST00000538136 GPR12P47775 334 aa6.09□□□□□ -1.43
MSH6-209ENST00000538136 MRPL28Q13084 256 aaKnown RBP6.09□□□□□ -1.43
MSH6-209ENST00000538136 ECSCRQ19T08 205 aa6.09□□□□□ -1.43
MSH6-209ENST00000538136 OR1L1Q8NH94 360 aa6.09□□□□□ -1.43
MSH6-209ENST00000538136 MS4A10Q96PG2 267 aa6.09□□□□□ -1.43
MSH6-209ENST00000538136 ZNF251Q9BRH9 671 aa6.09□□□□□ -1.43
MSH6-209ENST00000538136 TMUB1Q9BVT8 246 aa6.09□□□□□ -1.43
MSH6-209ENST00000538136 ZNF69Q9UC07 566 aa6.09□□□□□ -1.43
MSH6-209ENST00000538136 CUBNO60494 3623 aa6.09□□□□□ -1.43
MSH6-209ENST00000538136 NSD1Q96L73 2696 aaPredicted RBP6.09□□□□□ -1.43
MSH6-209ENST00000538136 LOC390937A0A1W2PQ73 354 aa6.09□□□□□ -1.44
MSH6-209ENST00000538136 SHOXO15266 292 aa6.09□□□□□ -1.44
MSH6-209ENST00000538136 TMEM11P17152 192 aa6.09□□□□□ -1.44
MSH6-209ENST00000538136 FPR2P25090 351 aa6.09□□□□□ -1.44
MSH6-209ENST00000538136 GPR176Q14439 515 aa6.09□□□□□ -1.44
MSH6-209ENST00000538136 TMEM255AQ5JRV8 349 aa6.09□□□□□ -1.44
MSH6-209ENST00000538136 C20orf204Q6ZNR8 217 aa6.09□□□□□ -1.44
MSH6-209ENST00000538136 ADGRE4PQ86SQ3 457 aa6.09□□□□□ -1.44
MSH6-209ENST00000538136 OR5M8Q8NGP6 311 aa6.09□□□□□ -1.44
MSH6-209ENST00000538136 SPSB1Q96BD6 273 aa6.09□□□□□ -1.44
MSH6-209ENST00000538136 RRNAD1Q96FB5 475 aaKnown RBP6.09□□□□□ -1.44
MSH6-209ENST00000538136 DPCDQ9BVM2 203 aaPredicted RBP6.09□□□□□ -1.44
MSH6-209ENST00000538136 ZNF286AQ9HBT8 521 aa6.09□□□□□ -1.44
MSH6-209ENST00000538136 INSIG2Q9Y5U4 225 aa6.09□□□□□ -1.44
MSH6-209ENST00000538136 SOX21Q9Y651 276 aaPredicted RBP6.09□□□□□ -1.44
MSH6-209ENST00000538136 CSMD1Q96PZ7 3565 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 IGHV3OR16-8A0A075B7F1 116 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 MDFIC2A0A1B0GVS7 189 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 SNRPCP09234 159 aaKnown RBP6.08□□□□□ -1.44
MSH6-209ENST00000538136 HOXB1P14653 301 aaPredicted RBP6.08□□□□□ -1.44
MSH6-209ENST00000538136 MDH2P40926 338 aaKnown RBP6.08□□□□□ -1.44
MSH6-209ENST00000538136 LINC00205P59089 165 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 SORDQ00796 357 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 MOGAT2Q3SYC2 334 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 PLET1Q6UQ28 207 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 SUMF2Q8NBJ7 301 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 GALMQ96C23 342 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 TMEM165Q9HC07 324 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 TENM4Q6N022 2769 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 H3BMQ9 156 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 PIN1P1O15428 100 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 VSIG8P0DPA2 414 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 WDR82Q6UXN9 313 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 GCSAMQ8N6F7 178 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 HPSE2Q8WWQ2 592 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 PPP1R14BQ96C90 147 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 SLC30A2Q9BRI3 323 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 IGKV1-9A0A0C4DH69 117 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 FUOMA2VDF0 154 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 H3BUI4 141 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 SLC22A1O15245 554 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 SOX15O60248 233 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 PFDN1O60925 122 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 FCGR3BO75015 233 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 LY86O95711 162 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 ELK1P19419 428 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 MMDQ15546 238 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 RSPO1Q2MKA7 263 aaPredicted RBP6.08□□□□□ -1.44
MSH6-209ENST00000538136 LAIR2Q6ISS4 152 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 ZNF295-AS1Q8N0V1 137 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 NEU4Q8WWR8 484 aaPredicted RBP6.08□□□□□ -1.44
MSH6-209ENST00000538136 RSRP1Q9BUV0 290 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 YTHDF1Q9BYJ9 559 aaKnown RBP6.08□□□□□ -1.44
MSH6-209ENST00000538136 TLNRD1Q9H1K6 362 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 C14orf166Q9Y224 244 aaKnown RBP6.08□□□□□ -1.44
MSH6-209ENST00000538136 WSB1Q9Y6I7 421 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 NCKAP5O14513 1909 aa6.08□□□□□ -1.44
MSH6-209ENST00000538136 ZNF106Q9H2Y7 1883 aaKnown RBP6.07□□□□□ -1.44
MSH6-209ENST00000538136 TNFSF8P32971 234 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 FAM209AQ5JX71 171 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 DMKNQ6E0U4 476 aaPredicted RBP6.07□□□□□ -1.44
MSH6-209ENST00000538136 FAM166AQ6J272 317 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 BAIAP2L2Q6UXY1 529 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 TMEM91Q6ZNR0 172 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 ZNF329Q86UD4 541 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 OR52I2Q8NH67 350 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 AQP3Q92482 292 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 RGP1Q92546 391 aaPredicted RBP6.07□□□□□ -1.44
MSH6-209ENST00000538136 MSI2Q96DH6 328 aaKnown RBP6.07□□□□□ -1.44
MSH6-209ENST00000538136 MED30Q96HR3 178 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 FAM103A1Q9BTL3 118 aaKnown RBP6.07□□□□□ -1.44
MSH6-209ENST00000538136 IL19Q9UHD0 177 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 A0A0A6YYH2 397 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 A0A1B0GTI1 187 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 A0A1B0GV50 99 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 TMEM30CPA0ZSE6 113 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 A6NJ64 397 aa6.07□□□□□ -1.44
MSH6-209ENST00000538136 FOXH1O75593 365 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms