RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 DCHS1Q96JQ0 3298 aa11.55□□□□□ -0.56
HDAC4-214ENST00000535493 CCL3P10147 92 aa11.55□□□□□ -0.56
HDAC4-214ENST00000535493 CCNOP22674 350 aa11.55□□□□□ -0.56
HDAC4-214ENST00000535493 OTX1P32242 354 aaPredicted RBP11.55□□□□□ -0.56
HDAC4-214ENST00000535493 SLC25A53Q5H9E4 307 aa11.55□□□□□ -0.56
HDAC4-214ENST00000535493 AKR1C8PQ5T2L2 129 aa11.55□□□□□ -0.56
HDAC4-214ENST00000535493 SLC23A3Q6PIS1 610 aa11.55□□□□□ -0.56
HDAC4-214ENST00000535493 LRTM2Q8N967 370 aa11.55□□□□□ -0.56
HDAC4-214ENST00000535493 KDF1Q8NAX2 398 aaPredicted RBP11.55□□□□□ -0.56
HDAC4-214ENST00000535493 LFNGQ8NES3 379 aa11.55□□□□□ -0.56
HDAC4-214ENST00000535493 CA14Q9ULX7 337 aa11.55□□□□□ -0.56
HDAC4-214ENST00000535493 CHCHD2Q9Y6H1 151 aaPredicted RBP11.55□□□□□ -0.56
HDAC4-214ENST00000535493 TRDCB7Z8K6 153 aa11.55□□□□□ -0.56
HDAC4-214ENST00000535493 CD55P08174 381 aa11.55□□□□□ -0.56
HDAC4-214ENST00000535493 CCL2P13500 99 aa11.55□□□□□ -0.56
HDAC4-214ENST00000535493 ZNF32P17041 273 aa11.55□□□□□ -0.56
HDAC4-214ENST00000535493 FUT3P21217 361 aa11.55□□□□□ -0.56
HDAC4-214ENST00000535493 DAZAP2Q15038 168 aaPredicted RBP11.55□□□□□ -0.56
HDAC4-214ENST00000535493 PLCXD3Q63HM9 321 aa11.55□□□□□ -0.56
HDAC4-214ENST00000535493 SLC25A24Q6NUK1 477 aa11.55□□□□□ -0.56
HDAC4-214ENST00000535493 HIST3H2BBQ8N257 126 aa11.55□□□□□ -0.56
HDAC4-214ENST00000535493 ZIC4Q8N9L1 334 aa11.55□□□□□ -0.56
HDAC4-214ENST00000535493 NECAP1Q8NC96 275 aa11.55□□□□□ -0.56
HDAC4-214ENST00000535493 OR5L2Q8NGL0 311 aa11.55□□□□□ -0.56
HDAC4-214ENST00000535493 CPNE4Q96A23 557 aaPredicted RBP11.55□□□□□ -0.56
HDAC4-214ENST00000535493 TVP23CQ96ET8 276 aa11.55□□□□□ -0.56
HDAC4-214ENST00000535493 ANGPTL4Q9BY76 406 aa11.55□□□□□ -0.56
HDAC4-214ENST00000535493 TMEM222Q9H0R3 208 aa11.55□□□□□ -0.56
HDAC4-214ENST00000535493 ZNF665Q9H7R5 613 aa11.55□□□□□ -0.56
HDAC4-214ENST00000535493 TCN2P20062 427 aa11.54□□□□□ -0.56
HDAC4-214ENST00000535493 DTYMKP23919 212 aa11.54□□□□□ -0.56
HDAC4-214ENST00000535493 MSX1P28360 303 aa11.54□□□□□ -0.56
HDAC4-214ENST00000535493 H3F3AP84243 136 aa11.54□□□□□ -0.56
HDAC4-214ENST00000535493 MALLQ13021 153 aa11.54□□□□□ -0.56
HDAC4-214ENST00000535493 C9orf135Q5VTT2 229 aa11.54□□□□□ -0.56
HDAC4-214ENST00000535493 WDR25Q64LD2 544 aaPredicted RBP11.54□□□□□ -0.56
HDAC4-214ENST00000535493 RTL6Q6ICC9 239 aa11.54□□□□□ -0.56
HDAC4-214ENST00000535493 ZNF100Q8IYN0 542 aa11.54□□□□□ -0.56
HDAC4-214ENST00000535493 CLDND2Q8NHS1 167 aa11.54□□□□□ -0.56
HDAC4-214ENST00000535493 UBALD1Q8TB05 177 aa11.54□□□□□ -0.56
HDAC4-214ENST00000535493 SRXN1Q9BYN0 137 aa11.54□□□□□ -0.56
HDAC4-214ENST00000535493 PLEKHF2Q9H8W4 249 aa11.54□□□□□ -0.56
HDAC4-214ENST00000535493 FSCN3Q9NQT6 498 aa11.54□□□□□ -0.56
HDAC4-214ENST00000535493 CCL28Q9NRJ3 127 aa11.54□□□□□ -0.56
HDAC4-214ENST00000535493 COL5A1P20908 1838 aaPredicted RBP11.54□□□□□ -0.56
HDAC4-214ENST00000535493 AHCTF1Q8WYP5 2266 aa11.54□□□□□ -0.56
HDAC4-214ENST00000535493 DOCK11Q5JSL3 2073 aa11.54□□□□□ -0.56
HDAC4-214ENST00000535493 A0A0G2JRQ6 117 aa11.54□□□□□ -0.56
HDAC4-214ENST00000535493 HMGB3O15347 200 aaKnown RBP11.54□□□□□ -0.56
HDAC4-214ENST00000535493 GLB1P16278 677 aa11.54□□□□□ -0.56
HDAC4-214ENST00000535493 NXPH1P58417 271 aa11.54□□□□□ -0.56
HDAC4-214ENST00000535493 IGFBP7Q16270 282 aa11.54□□□□□ -0.56
HDAC4-214ENST00000535493 SELENOHQ8IZQ5 122 aaKnown RBP11.54□□□□□ -0.56
HDAC4-214ENST00000535493 INTS12Q96CB8 462 aaKnown RBP11.54□□□□□ -0.56
HDAC4-214ENST00000535493 BCO1Q9HAY6 547 aa11.54□□□□□ -0.56
HDAC4-214ENST00000535493 LYRM2Q9NU23 88 aaPredicted RBP11.54□□□□□ -0.56
HDAC4-214ENST00000535493 GFOD1Q9NXC2 390 aa11.54□□□□□ -0.56
HDAC4-214ENST00000535493 CRIM1Q9NZV1 1036 aa11.54□□□□□ -0.56
HDAC4-214ENST00000535493 KIAA1456Q9P272 454 aa11.54□□□□□ -0.56
HDAC4-214ENST00000535493 A0A0J9YW62 118 aa11.53□□□□□ -0.56
HDAC4-214ENST00000535493 SEC14L6B5MCN3 397 aa11.53□□□□□ -0.56
HDAC4-214ENST00000535493 CA11O75493 328 aa11.53□□□□□ -0.56
HDAC4-214ENST00000535493 MAS1LP35410 378 aa11.53□□□□□ -0.56
HDAC4-214ENST00000535493 CD200P41217 278 aa11.53□□□□□ -0.56
HDAC4-214ENST00000535493 SSX7Q7RTT5 188 aa11.53□□□□□ -0.56
HDAC4-214ENST00000535493 IL22RA1Q8N6P7 574 aa11.53□□□□□ -0.56
HDAC4-214ENST00000535493 OR51H1Q8NH63 302 aa11.53□□□□□ -0.56
HDAC4-214ENST00000535493 NEK7Q8TDX7 302 aa11.53□□□□□ -0.56
HDAC4-214ENST00000535493 FAM210BQ96KR6 192 aa11.53□□□□□ -0.56
HDAC4-214ENST00000535493 C11orf1Q9H5F2 150 aa11.53□□□□□ -0.56
HDAC4-214ENST00000535493 TRAV39A0A0B4J263 110 aa11.53□□□□□ -0.56
HDAC4-214ENST00000535493 HSPA12AO43301 675 aa11.53□□□□□ -0.56
HDAC4-214ENST00000535493 PDCD6O75340 191 aa11.53□□□□□ -0.56
HDAC4-214ENST00000535493 HIST1H1BP16401 226 aaKnown RBP11.53□□□□□ -0.56
HDAC4-214ENST00000535493 NDUFB7P17568 137 aa11.53□□□□□ -0.56
HDAC4-214ENST00000535493 GLIPR1P48060 266 aa11.53□□□□□ -0.56
HDAC4-214ENST00000535493 SSX9Q7RTT3 188 aa11.53□□□□□ -0.56
HDAC4-214ENST00000535493 MAML2Q8IZL2 1156 aaPredicted RBP11.53□□□□□ -0.56
HDAC4-214ENST00000535493 ZNF611Q8N823 705 aa11.53□□□□□ -0.56
HDAC4-214ENST00000535493 ADPRHL1Q8NDY3 354 aa11.53□□□□□ -0.56
HDAC4-214ENST00000535493 SPSB1Q96BD6 273 aa11.53□□□□□ -0.56
HDAC4-214ENST00000535493 R4GN57 208 aa11.53□□□□□ -0.56
HDAC4-214ENST00000535493 OR5H1A6NKK0 313 aa11.52□□□□□ -0.56
HDAC4-214ENST00000535493 PITX3O75364 302 aa11.52□□□□□ -0.56
HDAC4-214ENST00000535493 SYT13Q7L8C5 426 aa11.52□□□□□ -0.56
HDAC4-214ENST00000535493 DPPA2Q7Z7J5 298 aa11.52□□□□□ -0.56
HDAC4-214ENST00000535493 GPR137CQ8N3F9 429 aa11.52□□□□□ -0.56
HDAC4-214ENST00000535493 CCDC71LQ8N9Z2 235 aa11.52□□□□□ -0.56
HDAC4-214ENST00000535493 NOSIPQ9Y314 301 aaKnown RBP11.52□□□□□ -0.56
HDAC4-214ENST00000535493 SYNGR3O43761 229 aa11.52□□□□□ -0.57
HDAC4-214ENST00000535493 IAPPP10997 89 aa11.52□□□□□ -0.57
HDAC4-214ENST00000535493 CRYGSP22914 178 aa11.52□□□□□ -0.57
HDAC4-214ENST00000535493 HLA-DRB3P79483 266 aa11.52□□□□□ -0.57
HDAC4-214ENST00000535493 MRPS34P82930 218 aaKnown RBP11.52□□□□□ -0.57
HDAC4-214ENST00000535493 HERPUD1Q15011 391 aa11.52□□□□□ -0.57
HDAC4-214ENST00000535493 C10orf128Q5T292 105 aa11.52□□□□□ -0.57
HDAC4-214ENST00000535493 BEND4Q6ZU67 534 aa11.52□□□□□ -0.57
HDAC4-214ENST00000535493 YRDCQ86U90 279 aaKnown RBP11.52□□□□□ -0.57
HDAC4-214ENST00000535493 TMEM54Q969K7 222 aa11.52□□□□□ -0.57
HDAC4-214ENST00000535493 SIGLEC12Q96PQ1 595 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms