RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 C1QTNF8P60827 252 aa4.49□□□□□ -1.69
SNHG1-201ENST00000535076 RPL27P61353 136 aaKnown RBP4.49□□□□□ -1.69
SNHG1-201ENST00000535076 GRB2P62993 217 aaKnown RBP4.49□□□□□ -1.69
SNHG1-201ENST00000535076 ADAM8P78325 824 aa4.49□□□□□ -1.69
SNHG1-201ENST00000535076 DGCR2P98153 550 aa4.49□□□□□ -1.69
SNHG1-201ENST00000535076 MFGE8Q08431 387 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-201ENST00000535076 ZNF266Q14584 549 aa4.49□□□□□ -1.69
SNHG1-201ENST00000535076 PMVKQ15126 192 aa4.49□□□□□ -1.69
SNHG1-201ENST00000535076 OR8B8Q15620 311 aa4.49□□□□□ -1.69
SNHG1-201ENST00000535076 PMCHL1Q16048 86 aa4.49□□□□□ -1.69
SNHG1-201ENST00000535076 DUSP5Q16690 384 aa4.49□□□□□ -1.69
SNHG1-201ENST00000535076 CDO1Q16878 200 aa4.49□□□□□ -1.69
SNHG1-201ENST00000535076 AMMECR1LQ6DCA0 310 aa4.49□□□□□ -1.69
SNHG1-201ENST00000535076 SLC27A1Q6PCB7 646 aa4.49□□□□□ -1.69
SNHG1-201ENST00000535076 ZNF788Q6ZQV5 615 aa4.49□□□□□ -1.69
SNHG1-201ENST00000535076 ESPNLQ6ZVH7 1005 aa4.49□□□□□ -1.69
SNHG1-201ENST00000535076 PPP1R27Q86WC6 154 aa4.49□□□□□ -1.69
SNHG1-201ENST00000535076 PGBD5Q8N414 524 aa4.49□□□□□ -1.69
SNHG1-201ENST00000535076 CISD2Q8N5K1 135 aaKnown RBP4.49□□□□□ -1.69
SNHG1-201ENST00000535076 OR4L1Q8NH43 312 aa4.49□□□□□ -1.69
SNHG1-201ENST00000535076 SCAMP5Q8TAC9 235 aa4.49□□□□□ -1.69
SNHG1-201ENST00000535076 SYNPRQ8TBG9 265 aa4.49□□□□□ -1.69
SNHG1-201ENST00000535076 C8orf44Q96CB5 159 aa4.49□□□□□ -1.69
SNHG1-201ENST00000535076 PCED1BQ96HM7 432 aa4.49□□□□□ -1.69
SNHG1-201ENST00000535076 ORAI2Q96SN7 254 aa4.49□□□□□ -1.69
SNHG1-201ENST00000535076 CDX2Q99626 313 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-201ENST00000535076 NRTNQ99748 197 aa4.49□□□□□ -1.69
SNHG1-201ENST00000535076 ANAPC13Q9BS18 74 aa4.49□□□□□ -1.69
SNHG1-201ENST00000535076 ABHD6Q9BV23 337 aa4.49□□□□□ -1.69
SNHG1-201ENST00000535076 NPFFR1Q9GZQ6 430 aa4.49□□□□□ -1.69
SNHG1-201ENST00000535076 WDR61Q9GZS3 305 aaKnown RBP4.49□□□□□ -1.69
SNHG1-201ENST00000535076 IFI27L2Q9H2X8 130 aa4.49□□□□□ -1.69
SNHG1-201ENST00000535076 PARLQ9H300 379 aa4.49□□□□□ -1.69
SNHG1-201ENST00000535076 MS4A5Q9H3V2 200 aa4.49□□□□□ -1.69
SNHG1-201ENST00000535076 PPDPFQ9H3Y8 114 aa4.49□□□□□ -1.69
SNHG1-201ENST00000535076 CALHM2Q9HA72 323 aa4.49□□□□□ -1.69
SNHG1-201ENST00000535076 UBTD1Q9HAC8 227 aa4.49□□□□□ -1.69
SNHG1-201ENST00000535076 MRPL17Q9NRX2 175 aaKnown RBP4.49□□□□□ -1.69
SNHG1-201ENST00000535076 SLC25A10Q9UBX3 287 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-201ENST00000535076 AJAP1Q9UKB5 411 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-201ENST00000535076 SLC7A7Q9UM01 511 aa4.49□□□□□ -1.69
SNHG1-201ENST00000535076 IER3IP1Q9Y5U9 82 aa4.49□□□□□ -1.69
SNHG1-201ENST00000535076 AHDC1Q5TGY3 1603 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-201ENST00000535076 CHD3Q12873 2000 aaKnown RBP4.48□□□□□ -1.69
SNHG1-201ENST00000535076 GBF1Q92538 1859 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 TRIP11Q15643 1979 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 LOC102723996A0A087X1L8 192 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 A0A0G2JLM5 398 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 KIR2DS5A0A0G2JLQ3 304 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 A0A0G2JNG1 304 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 TCRBV7S3A2A0A539 114 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 PRSS37A4D1T9 235 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 FRG2CA6NGY1 282 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 ZNF860A6NHJ4 632 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 SLC38A8A6NNN8 435 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 CD300LBA8K4G0 201 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 K7EP34 96 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 HMGB3O15347 200 aaKnown RBP4.48□□□□□ -1.69
SNHG1-201ENST00000535076 KLK10O43240 276 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 DHHO43323 396 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 GCM2O75603 506 aaPredicted RBP4.48□□□□□ -1.69
SNHG1-201ENST00000535076 MPZL1O95297 269 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 ABHD16AO95870 558 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 MT-CO3P00414 261 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 HLA-DRB1P01911 266 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 APOA2P02652 100 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 CRYGDP07320 174 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 TACSTD2P09758 323 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 AKAIN1P0CW23 69 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 CT45A10P0DMU9 189 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 SRIP30626 198 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 TIA1P31483 386 aaKnown RBP eCLIP4.48□□□□□ -1.695e-6■■■■□ 23.8
SNHG1-201ENST00000535076 PYCR1P32322 319 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 EFNA5P52803 228 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 SEC11AP67812 179 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 SLC35B1P78383 322 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 PSG9Q00887 426 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 COL10A1Q03692 680 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 EFEMP1Q12805 493 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 FOXF1Q12946 379 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 GINS1Q14691 196 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 KIR2DS5Q14953 304 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 EXOSC7Q15024 291 aaKnown RBP4.48□□□□□ -1.69
SNHG1-201ENST00000535076 PRR30Q53SZ7 412 aaPredicted RBP4.48□□□□□ -1.69
SNHG1-201ENST00000535076 LY6G6FQ5SQ64 297 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 TXNDC8Q6A555 127 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 TMEM211Q6ICI0 200 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 TEPPQ6URK8 271 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 CBLN3Q6UW01 205 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 SBSNQ6UWP8 590 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 PRRT2Q7Z6L0 340 aaPredicted RBP4.48□□□□□ -1.69
SNHG1-201ENST00000535076 BLIDQ8IZY5 108 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 UMODL1-AS1Q8N2C9 162 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 BOLLQ8N9W6 283 aaKnown RBP4.48□□□□□ -1.69
SNHG1-201ENST00000535076 SUMF2Q8NBJ7 301 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 OR4K17Q8NGC6 315 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 OR2G3Q8NGZ4 309 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 MFSD8Q8NHS3 518 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 LRRC15Q8TF66 581 aa4.48□□□□□ -1.69
SNHG1-201ENST00000535076 SLC38A5Q8WUX1 472 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms