RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 CAPGP40121 348 aa7.71□□□□□ -1.18
SSBP3-215ENST00000533946 PTGFRP43088 359 aa7.71□□□□□ -1.18
SSBP3-215ENST00000533946 KIR2DS4P43632 304 aa7.71□□□□□ -1.18
SSBP3-215ENST00000533946 AQP4P55087 323 aa7.71□□□□□ -1.18
SSBP3-215ENST00000533946 TCTEX1D4Q5JR98 221 aa7.71□□□□□ -1.18
SSBP3-215ENST00000533946 SPIN3Q5JUX0 258 aa7.71□□□□□ -1.18
SSBP3-215ENST00000533946 RSBN1Q5VWQ0 802 aaPredicted RBP7.71□□□□□ -1.18
SSBP3-215ENST00000533946 ELP2Q6IA86 826 aa7.71□□□□□ -1.18
SSBP3-215ENST00000533946 SAXO1Q8IYX7 474 aa7.71□□□□□ -1.18
SSBP3-215ENST00000533946 SUMF2Q8NBJ7 301 aa7.71□□□□□ -1.18
SSBP3-215ENST00000533946 TMEM104Q8NE00 496 aa7.71□□□□□ -1.18
SSBP3-215ENST00000533946 Q8NFD4 153 aa7.71□□□□□ -1.18
SSBP3-215ENST00000533946 OR4D6Q8NGJ1 314 aa7.71□□□□□ -1.18
SSBP3-215ENST00000533946 OR51T1Q8NGJ9 327 aa7.71□□□□□ -1.18
SSBP3-215ENST00000533946 OR13D1Q8NGV5 346 aa7.71□□□□□ -1.18
SSBP3-215ENST00000533946 OR5R1Q8NH85 324 aa7.71□□□□□ -1.18
SSBP3-215ENST00000533946 NDNFQ8TB73 568 aa7.71□□□□□ -1.18
SSBP3-215ENST00000533946 MRGPRDQ8TDS7 321 aa7.71□□□□□ -1.18
SSBP3-215ENST00000533946 TFAP2CQ92754 450 aa7.71□□□□□ -1.18
SSBP3-215ENST00000533946 CORO2AQ92828 525 aa7.71□□□□□ -1.18
SSBP3-215ENST00000533946 SMIM19Q96E16 107 aa7.71□□□□□ -1.18
SSBP3-215ENST00000533946 KIRREL1Q96J84 757 aa7.71□□□□□ -1.18
SSBP3-215ENST00000533946 GPER1Q99527 375 aa7.71□□□□□ -1.18
SSBP3-215ENST00000533946 BANF2Q9H503 90 aa7.71□□□□□ -1.18
SSBP3-215ENST00000533946 ZNF281Q9Y2X9 895 aa7.71□□□□□ -1.18
SSBP3-215ENST00000533946 IGHV3-43A0A0B4J1X8 118 aa7.7□□□□□ -1.18
SSBP3-215ENST00000533946 BTBD17A6NE02 478 aa7.7□□□□□ -1.18
SSBP3-215ENST00000533946 SNTNA6NMZ2 147 aa7.7□□□□□ -1.18
SSBP3-215ENST00000533946 FAM90A22PA8MWA6 464 aa7.7□□□□□ -1.18
SSBP3-215ENST00000533946 G3V4G9 280 aa7.7□□□□□ -1.18
SSBP3-215ENST00000533946 SLC31A2O15432 143 aa7.7□□□□□ -1.18
SSBP3-215ENST00000533946 ALX3O95076 343 aa7.7□□□□□ -1.18
SSBP3-215ENST00000533946 CYB5AP00167 134 aa7.7□□□□□ -1.18
SSBP3-215ENST00000533946 CCDC159P0C7I6 412 aa7.7□□□□□ -1.18
SSBP3-215ENST00000533946 IGHV3-43DP0DP04 118 aa7.7□□□□□ -1.18
SSBP3-215ENST00000533946 SNRPBP14678 240 aaKnown RBP7.7□□□□□ -1.18
SSBP3-215ENST00000533946 SERPINA2P20848 420 aa7.7□□□□□ -1.18
SSBP3-215ENST00000533946 GLP1RP43220 463 aa7.7□□□□□ -1.18
SSBP3-215ENST00000533946 GNG10P50151 68 aa7.7□□□□□ -1.18
SSBP3-215ENST00000533946 RBM39Q14498 530 aaKnown RBP7.7□□□□□ -1.18
SSBP3-215ENST00000533946 SLC22A6Q4U2R8 563 aa7.7□□□□□ -1.18
SSBP3-215ENST00000533946 PAN3Q58A45 887 aaKnown RBP7.7□□□□□ -1.18
SSBP3-215ENST00000533946 DDI2Q5TDH0 399 aa7.7□□□□□ -1.18
SSBP3-215ENST00000533946 SIGIRRQ6IA17 410 aa7.7□□□□□ -1.18
SSBP3-215ENST00000533946 OR10K2Q6IF99 312 aa7.7□□□□□ -1.18
SSBP3-215ENST00000533946 HEPN1Q6WQI6 88 aa7.7□□□□□ -1.18
SSBP3-215ENST00000533946 Q6ZPA2 131 aa7.7□□□□□ -1.18
SSBP3-215ENST00000533946 Q8IYB0 196 aa7.7□□□□□ -1.18
SSBP3-215ENST00000533946 PXT1Q8NFP0 134 aa7.7□□□□□ -1.18
SSBP3-215ENST00000533946 GPR148Q8TDV2 347 aa7.7□□□□□ -1.18
SSBP3-215ENST00000533946 CFHR4Q92496 578 aa7.7□□□□□ -1.18
SSBP3-215ENST00000533946 MUL1Q969V5 352 aa7.7□□□□□ -1.18
SSBP3-215ENST00000533946 MALSU1Q96EH3 234 aa7.7□□□□□ -1.18
SSBP3-215ENST00000533946 RDH12Q96NR8 316 aa7.7□□□□□ -1.18
SSBP3-215ENST00000533946 ZNF184Q99676 751 aaPredicted RBP7.7□□□□□ -1.18
SSBP3-215ENST00000533946 CITED2Q99967 270 aaPredicted RBP7.7□□□□□ -1.18
SSBP3-215ENST00000533946 OCSTAMPQ9BR26 566 aa7.7□□□□□ -1.18
SSBP3-215ENST00000533946 CLEC7AQ9BXN2 247 aa7.7□□□□□ -1.18
SSBP3-215ENST00000533946 UBE2J1Q9Y385 318 aaPredicted RBP7.7□□□□□ -1.18
SSBP3-215ENST00000533946 COL7A1Q02388 2944 aa7.69□□□□□ -1.18
SSBP3-215ENST00000533946 MEIKINA0A087WXM9 373 aa7.69□□□□□ -1.18
SSBP3-215ENST00000533946 TRGV10A0A0A0MS01 117 aa7.69□□□□□ -1.18
SSBP3-215ENST00000533946 A0A1B0GUS0 222 aa7.69□□□□□ -1.18
SSBP3-215ENST00000533946 LINC01548A6NM66 108 aa7.69□□□□□ -1.18
SSBP3-215ENST00000533946 ZNF736B4DX44 427 aaPredicted RBP7.69□□□□□ -1.18
SSBP3-215ENST00000533946 PTGES3LE9PB15 166 aa7.69□□□□□ -1.18
SSBP3-215ENST00000533946 RBP4P02753 201 aa7.69□□□□□ -1.18
SSBP3-215ENST00000533946 MAS1P04201 325 aa7.69□□□□□ -1.18
SSBP3-215ENST00000533946 CELP19835 753 aa7.69□□□□□ -1.18
SSBP3-215ENST00000533946 BDKRB2P30411 391 aa7.69□□□□□ -1.18
SSBP3-215ENST00000533946 ZNF93P35789 620 aaPredicted RBP7.69□□□□□ -1.18
SSBP3-215ENST00000533946 MTNR1BP49286 362 aa7.69□□□□□ -1.18
SSBP3-215ENST00000533946 RBM11P57052 281 aaKnown RBP7.69□□□□□ -1.18
SSBP3-215ENST00000533946 RPL15P61313 204 aaKnown RBP7.69□□□□□ -1.18
SSBP3-215ENST00000533946 RSU1Q15404 277 aa7.69□□□□□ -1.18
SSBP3-215ENST00000533946 NSUN5P1Q3KNT7 163 aa7.69□□□□□ -1.18
SSBP3-215ENST00000533946 CCDC58Q4VC31 144 aa7.69□□□□□ -1.18
SSBP3-215ENST00000533946 TTC23Q5W5X9 447 aa7.69□□□□□ -1.18
SSBP3-215ENST00000533946 C18orf65Q6ZTR6 163 aa7.69□□□□□ -1.18
SSBP3-215ENST00000533946 C10orf67Q8IYJ2 551 aa7.69□□□□□ -1.18
SSBP3-215ENST00000533946 Q8N2B8 174 aa7.69□□□□□ -1.18
SSBP3-215ENST00000533946 PACRGLQ8N7B6 248 aa7.69□□□□□ -1.18
SSBP3-215ENST00000533946 NANOGP1Q8N7R0 232 aa7.69□□□□□ -1.18
SSBP3-215ENST00000533946 OR52N1Q8NH53 320 aa7.69□□□□□ -1.18
SSBP3-215ENST00000533946 DERL3Q96Q80 235 aa7.69□□□□□ -1.18
SSBP3-215ENST00000533946 GFI1Q99684 422 aa7.69□□□□□ -1.18
SSBP3-215ENST00000533946 DPCDQ9BVM2 203 aaPredicted RBP7.69□□□□□ -1.18
SSBP3-215ENST00000533946 MMP28Q9H239 520 aa7.69□□□□□ -1.18
SSBP3-215ENST00000533946 CALYQ9NYX4 217 aa7.69□□□□□ -1.18
SSBP3-215ENST00000533946 PSG11Q9UQ72 335 aa7.69□□□□□ -1.18
SSBP3-215ENST00000533946 ST3GAL6Q9Y274 331 aa7.69□□□□□ -1.18
SSBP3-215ENST00000533946 LSM2Q9Y333 95 aaKnown RBP7.69□□□□□ -1.18
SSBP3-215ENST00000533946 EXOSC1Q9Y3B2 195 aaKnown RBP7.69□□□□□ -1.18
SSBP3-215ENST00000533946 TBL2Q9Y4P3 447 aaKnown RBP7.69□□□□□ -1.18
SSBP3-215ENST00000533946 IGHV3-72A0A0B4J1Y9 119 aa7.68□□□□□ -1.18
SSBP3-215ENST00000533946 KBTBD11-OT1A0A1B0GTJ5 212 aa7.68□□□□□ -1.18
SSBP3-215ENST00000533946 A0A1W2PPH5 198 aa7.68□□□□□ -1.18
SSBP3-215ENST00000533946 A0A1W2PRX2 142 aa7.68□□□□□ -1.18
SSBP3-215ENST00000533946 NPIPB11E5RHQ5 1161 aa7.68□□□□□ -1.18
SSBP3-215ENST00000533946 C15orf65H3BRN8 121 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 222.8 ms