RNA–Protein interactions for RNA: ENST00000533690.5

ATM-221, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 3,354 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-221ENST00000533690 HDHD3Q9BSH5 251 aaPredicted RBP3.33□□□□□ -1.88
ATM-221ENST00000533690 OR51I2Q9H344 312 aa3.33□□□□□ -1.88
ATM-221ENST00000533690 TMPRSS5Q9H3S3 457 aa3.33□□□□□ -1.88
ATM-221ENST00000533690 OPA3Q9H6K4 179 aa3.33□□□□□ -1.88
ATM-221ENST00000533690 PGPEP1Q9NXJ5 209 aa3.33□□□□□ -1.88
ATM-221ENST00000533690 HSPB7Q9UBY9 170 aa3.33□□□□□ -1.88
ATM-221ENST00000533690 PILRBQ9UKJ0 227 aa3.33□□□□□ -1.88
ATM-221ENST00000533690 NXT1Q9UKK6 140 aaKnown RBP3.33□□□□□ -1.88
ATM-221ENST00000533690 NPIPA1Q9UND3 350 aa3.33□□□□□ -1.88
ATM-221ENST00000533690 NOP16Q9Y3C1 178 aaKnown RBP3.33□□□□□ -1.88
ATM-221ENST00000533690 SAA2-SAA4A0A096LPE2 208 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 TRAV24A0A0B4J272 114 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 DCDC2BA2VCK2 349 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 OR5H15A6NDH6 313 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 SCGB1D1O95968 90 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 CGAP01215 116 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 APOC3P02656 99 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 OR5AC1P0C628 307 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 MYF5P13349 255 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 CDAP32320 146 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 CD200P41217 278 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 OR1D4P47884 311 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 DNASE1L1P49184 302 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 TLE3Q04726 772 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 ARL16Q0P5N6 197 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 NNATQ16517 81 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 KLK9Q2XQG4 91 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 CDPF1Q6NVV7 123 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 ZNF818PQ6ZRF7 136 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 Q6ZRG5 221 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 PNKDQ8N490 385 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 GATD1Q8NB37 220 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 INO80EQ8NBZ0 244 aaPredicted RBP3.32□□□□□ -1.88
ATM-221ENST00000533690 SNIP1Q8TAD8 396 aaKnown RBP3.32□□□□□ -1.88
ATM-221ENST00000533690 SECTM1Q8WVN6 248 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 DDB2Q92466 427 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 MR1Q95460 341 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 C11orf52Q96A22 123 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 CPNE4Q96A23 557 aaPredicted RBP3.32□□□□□ -1.88
ATM-221ENST00000533690 KLK9Q9UKQ9 250 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 IKZF2Q9UKS7 526 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 PADI1Q9ULC6 663 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 TP53TG3Q9ULZ0 132 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 KCNIP3Q9Y2W7 256 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 ATP23Q9Y6H3 246 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 WSB1Q9Y6I7 421 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 AKAP9Q99996 3911 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.32□□□□□ -1.88
ATM-221ENST00000533690 PSMB11A5LHX3 300 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 DHHO43323 396 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 GDF9O60383 454 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 HTR3BO95264 441 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 PPYP01298 95 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 IGKV1D-33P01593 117 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 IGKV1-33P01594 117 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 SOD3P08294 240 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 OR10J4P0C629 311 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 NR2C1P13056 603 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 GABRR1P24046 479 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 PSG4Q00888 419 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 CEACAM21Q3KPI0 293 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 PRAMEF17Q5VTA0 474 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 OTPQ5XKR4 325 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 Q6ZRM9 215 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 LYZL2Q7Z4W2 148 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 ZNF761Q86XN6 746 aaPredicted RBP3.32□□□□□ -1.88
ATM-221ENST00000533690 CALHM1Q8IU99 346 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 SPEM1Q8N4L4 309 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 OR1J1Q8NGS3 322 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 OR1F12Q8NHA8 337 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 ANAPC16Q96DE5 110 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 RBMXL1Q96E39 390 aaKnown RBP3.32□□□□□ -1.88
ATM-221ENST00000533690 URM1Q9BTM9 101 aaKnown RBP3.32□□□□□ -1.88
ATM-221ENST00000533690 ZNF471Q9BX82 626 aaPredicted RBP3.32□□□□□ -1.88
ATM-221ENST00000533690 SLC25A31Q9H0C2 315 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 GPR35Q9HC97 309 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 TP53TG5Q9Y2B4 290 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 LY96Q9Y6Y9 160 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 EYSQ5T1H1 3165 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 LOC100509620A0A075B734 347 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 C3orf85A0A1B0GTC6 90 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 A0A1W2PPH5 198 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 RBFOX3A6NFN3 312 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 C11orf98E9PRG8 122 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 SOX1O00570 391 aaPredicted RBP3.32□□□□□ -1.88
ATM-221ENST00000533690 DUX1O43812 170 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 CRYABP02511 175 aaKnown RBP3.32□□□□□ -1.88
ATM-221ENST00000533690 ZNF883P0CG24 379 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 AREGP15514 252 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 ZNF14P17017 642 aaPredicted RBP3.32□□□□□ -1.88
ATM-221ENST00000533690 EN2P19622 333 aaPredicted RBP3.32□□□□□ -1.88
ATM-221ENST00000533690 AADACP22760 399 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 NPPCP23582 126 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 ACP1P24666 158 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 IDH3GP51553 393 aaPredicted RBP3.32□□□□□ -1.88
ATM-221ENST00000533690 YPEL3P61236 119 aaPredicted RBP3.32□□□□□ -1.88
ATM-221ENST00000533690 SNRPEP62304 92 aaKnown RBP3.32□□□□□ -1.88
ATM-221ENST00000533690 TAF13Q15543 124 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 TMEM31Q5JXX7 168 aa3.32□□□□□ -1.88
ATM-221ENST00000533690 TMEM88Q6PEY1 159 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms