RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 KCNJ3P48549 501 aa16.65■□□□□ 0.26
CCS-208ENST00000533244 COMPP49747 757 aaPredicted RBP16.65■□□□□ 0.26
CCS-208ENST00000533244 ATXN7L3Q14CW9 347 aaPredicted RBP16.65■□□□□ 0.26
CCS-208ENST00000533244 SSX1Q16384 188 aa16.65■□□□□ 0.26
CCS-208ENST00000533244 PAN3Q58A45 887 aaKnown RBP16.65■□□□□ 0.26
CCS-208ENST00000533244 KRBOX4Q5JUW0 171 aa16.65■□□□□ 0.26
CCS-208ENST00000533244 AWAT2Q6E213 333 aa16.65■□□□□ 0.26
CCS-208ENST00000533244 TAS2R3Q9NYW6 316 aa16.65■□□□□ 0.26
CCS-208ENST00000533244 FAM96BQ9Y3D0 163 aa16.65■□□□□ 0.26
CCS-208ENST00000533244 TENM1Q9UKZ4 2725 aa16.65■□□□□ 0.26
CCS-208ENST00000533244 TRGV10A0A0A0MS01 117 aa16.64■□□□□ 0.25
CCS-208ENST00000533244 CLPXO76031 633 aa16.64■□□□□ 0.25
CCS-208ENST00000533244 IER3P46695 156 aa16.64■□□□□ 0.25
CCS-208ENST00000533244 ACTG1P63261 375 aa16.64■□□□□ 0.25
CCS-208ENST00000533244 C1orf100Q5SVJ3 147 aa16.64■□□□□ 0.25
CCS-208ENST00000533244 SPARTQ8N0X7 666 aa16.64■□□□□ 0.25
CCS-208ENST00000533244 SVOPQ8N4V2 548 aa16.64■□□□□ 0.25
CCS-208ENST00000533244 OR11H6Q8NGC7 330 aa16.64■□□□□ 0.25
CCS-208ENST00000533244 FOXRED1Q96CU9 486 aaPredicted RBP16.64■□□□□ 0.25
CCS-208ENST00000533244 GHRLQ9UBU3 117 aa16.64■□□□□ 0.25
CCS-208ENST00000533244 ODF3BA8MYP8 253 aa16.63■□□□□ 0.25
CCS-208ENST00000533244 HSPB6O14558 160 aa16.63■□□□□ 0.25
CCS-208ENST00000533244 OR7C1O76099 320 aaPredicted RBP16.63■□□□□ 0.25
CCS-208ENST00000533244 COX7A1P24310 79 aa16.63■□□□□ 0.25
CCS-208ENST00000533244 FABP5Q01469 135 aa16.63■□□□□ 0.25
CCS-208ENST00000533244 UBE2UQ5VVX9 321 aa16.63■□□□□ 0.25
CCS-208ENST00000533244 RSBN1Q5VWQ0 802 aaPredicted RBP16.63■□□□□ 0.25
CCS-208ENST00000533244 C16orf87Q6PH81 154 aa16.63■□□□□ 0.25
CCS-208ENST00000533244 TRAPPC6BQ86SZ2 158 aa16.63■□□□□ 0.25
CCS-208ENST00000533244 SUMF2Q8NBJ7 301 aa16.63■□□□□ 0.25
CCS-208ENST00000533244 OR13D1Q8NGV5 346 aa16.63■□□□□ 0.25
CCS-208ENST00000533244 PLPPR1Q8TBJ4 325 aa16.63■□□□□ 0.25
CCS-208ENST00000533244 C17orf50Q8WW18 174 aa16.63■□□□□ 0.25
CCS-208ENST00000533244 DPCDQ9BVM2 203 aaPredicted RBP16.63■□□□□ 0.25
CCS-208ENST00000533244 GAL3ST2Q9H3Q3 398 aa16.63■□□□□ 0.25
CCS-208ENST00000533244 NDUFB11Q9NX14 153 aa16.63■□□□□ 0.25
CCS-208ENST00000533244 RCC2Q9P258 522 aaKnown RBP16.63■□□□□ 0.25
CCS-208ENST00000533244 LRRC42Q9Y546 428 aa16.63■□□□□ 0.25
CCS-208ENST00000533244 SESN1Q9Y6P5 492 aa16.63■□□□□ 0.25
CCS-208ENST00000533244 KIAA2026Q5HYC2 2103 aa16.63■□□□□ 0.25
CCS-208ENST00000533244 FAM90A8PA6NJQ4 464 aa16.62■□□□□ 0.25
CCS-208ENST00000533244 ARL6IP5O75915 188 aa16.62■□□□□ 0.25
CCS-208ENST00000533244 IGHV4-59P01825 116 aa16.62■□□□□ 0.25
CCS-208ENST00000533244 CGB3P0DN86 165 aa16.62■□□□□ 0.25
CCS-208ENST00000533244 CGB7P0DN87 165 aa16.62■□□□□ 0.25
CCS-208ENST00000533244 HKR1P10072 659 aa16.62■□□□□ 0.25
CCS-208ENST00000533244 GLT8D1Q68CQ7 371 aa16.62■□□□□ 0.25
CCS-208ENST00000533244 ZNF626Q68DY1 528 aa16.62■□□□□ 0.25
CCS-208ENST00000533244 CD200R1LQ6Q8B3 271 aa16.62■□□□□ 0.25
CCS-208ENST00000533244 HEPN1Q6WQI6 88 aa16.62■□□□□ 0.25
CCS-208ENST00000533244 BEND2Q8NDZ0 799 aa16.62■□□□□ 0.25
CCS-208ENST00000533244 TMEM104Q8NE00 496 aa16.62■□□□□ 0.25
CCS-208ENST00000533244 CHIAQ9BZP6 476 aa16.62■□□□□ 0.25
CCS-208ENST00000533244 OR6C3Q9NZP0 311 aa16.62■□□□□ 0.25
CCS-208ENST00000533244 MMP23AO75900 390 aa16.62■□□□□ 0.25
CCS-208ENST00000533244 UBBP0CG47 229 aa16.62■□□□□ 0.25
CCS-208ENST00000533244 TAF9Q16594 264 aa16.62■□□□□ 0.25
CCS-208ENST00000533244 Q96M66 194 aa16.62■□□□□ 0.25
CCS-208ENST00000533244 GFI1Q99684 422 aa16.62■□□□□ 0.25
CCS-208ENST00000533244 BARHL1Q9BZE3 327 aa16.62■□□□□ 0.25
CCS-208ENST00000533244 SLITRK2Q9H156 845 aa16.62■□□□□ 0.25
CCS-208ENST00000533244 MEGF9Q9H1U4 602 aa16.62■□□□□ 0.25
CCS-208ENST00000533244 TMEM133Q9H2Q1 129 aa16.62■□□□□ 0.25
CCS-208ENST00000533244 KIF25Q9UIL4 384 aa16.62■□□□□ 0.25
CCS-208ENST00000533244 FAM90A10PA6NDY2 464 aa16.61■□□□□ 0.25
CCS-208ENST00000533244 FAM90A18PA6NE21 464 aa16.61■□□□□ 0.25
CCS-208ENST00000533244 FAM90A16PA6NEW6 464 aa16.61■□□□□ 0.25
CCS-208ENST00000533244 FAM90A20PA6NIJ5 464 aa16.61■□□□□ 0.25
CCS-208ENST00000533244 FAM90A7PA6NKC0 464 aa16.61■□□□□ 0.25
CCS-208ENST00000533244 ZNF729A6NN14 1252 aaPredicted RBP16.61■□□□□ 0.25
CCS-208ENST00000533244 FAM90A22PA8MWA6 464 aa16.61■□□□□ 0.25
CCS-208ENST00000533244 FAM90A12PA8MX19 464 aa16.61■□□□□ 0.25
CCS-208ENST00000533244 FAM90A5PA8MXJ8 464 aa16.61■□□□□ 0.25
CCS-208ENST00000533244 FAM90A23PA8MXZ1 464 aa16.61■□□□□ 0.25
CCS-208ENST00000533244 SLC22A1O15245 554 aa16.61■□□□□ 0.25
CCS-208ENST00000533244 PAHP00439 452 aa16.61■□□□□ 0.25
CCS-208ENST00000533244 FAM90A15PP0C7V4 464 aa16.61■□□□□ 0.25
CCS-208ENST00000533244 FAM90A13PP0C7W8 464 aa16.61■□□□□ 0.25
CCS-208ENST00000533244 FAM90A14PP0C7W9 464 aa16.61■□□□□ 0.25
CCS-208ENST00000533244 FAM90A24PP0C7X0 464 aa16.61■□□□□ 0.25
CCS-208ENST00000533244 MGMTP16455 207 aa16.61■□□□□ 0.25
CCS-208ENST00000533244 C17orf58Q2M2W7 97 aa16.61■□□□□ 0.25
CCS-208ENST00000533244 FCGR1BQ92637 280 aa16.61■□□□□ 0.25
CCS-208ENST00000533244 GCDHQ92947 438 aaPredicted RBP16.61■□□□□ 0.25
CCS-208ENST00000533244 DPAGT1Q9H3H5 408 aa16.61■□□□□ 0.25
CCS-208ENST00000533244 LINC00574Q9H8X3 128 aa16.61■□□□□ 0.25
CCS-208ENST00000533244 SPACA1Q9HBV2 294 aa16.61■□□□□ 0.25
CCS-208ENST00000533244 ING3Q9NXR8 418 aa16.61■□□□□ 0.25
CCS-208ENST00000533244 TBL2Q9Y4P3 447 aaKnown RBP16.61■□□□□ 0.25
CCS-208ENST00000533244 CDK2P24941 298 aa16.6■□□□□ 0.25
CCS-208ENST00000533244 KCTD21Q4G0X4 260 aa16.6■□□□□ 0.25
CCS-208ENST00000533244 LDLRAD2Q5SZI1 272 aa16.6■□□□□ 0.25
CCS-208ENST00000533244 PRAMEF5Q5TYX0 476 aa16.6■□□□□ 0.25
CCS-208ENST00000533244 SLC35E4Q6ICL7 350 aa16.6■□□□□ 0.25
CCS-208ENST00000533244 ZNF773Q6PK81 442 aa16.6■□□□□ 0.25
CCS-208ENST00000533244 OR13A1Q8NGR1 328 aa16.6■□□□□ 0.25
CCS-208ENST00000533244 BANF2Q9H503 90 aa16.6■□□□□ 0.25
CCS-208ENST00000533244 MEIKINA0A087WXM9 373 aa16.59■□□□□ 0.25
CCS-208ENST00000533244 IGHV2-26A0A0B4J1V2 119 aa16.59■□□□□ 0.25
CCS-208ENST00000533244 CRTAPO75718 401 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms