RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 PAN3Q58A45 887 aaKnown RBP18.84■□□□□ 0.61
SMPD1-209ENST00000533196 DHRSXQ8N5I4 330 aa18.84■□□□□ 0.61
SMPD1-209ENST00000533196 OR52N1Q8NH53 320 aa18.84■□□□□ 0.61
SMPD1-209ENST00000533196 FAM110DQ8TAY7 271 aaPredicted RBP18.84■□□□□ 0.61
SMPD1-209ENST00000533196 CYGBQ8WWM9 190 aa18.84■□□□□ 0.61
SMPD1-209ENST00000533196 TMEM80Q96HE8 168 aa18.84■□□□□ 0.61
SMPD1-209ENST00000533196 AKR1E2Q96JD6 320 aa18.84■□□□□ 0.61
SMPD1-209ENST00000533196 IL36GQ9NZH8 169 aa18.84■□□□□ 0.61
SMPD1-209ENST00000533196 TRAV24A0A0B4J272 114 aa18.83■□□□□ 0.6
SMPD1-209ENST00000533196 OOSP1A8MZH6 123 aa18.83■□□□□ 0.6
SMPD1-209ENST00000533196 TOR1AO14656 332 aa18.83■□□□□ 0.6
SMPD1-209ENST00000533196 CLIC3O95833 236 aa18.83■□□□□ 0.6
SMPD1-209ENST00000533196 ADARB1P78563 741 aaKnown RBP18.83■□□□□ 0.6
SMPD1-209ENST00000533196 C17orf58Q2M2W7 97 aa18.83■□□□□ 0.6
SMPD1-209ENST00000533196 HLA-DRB5Q30154 266 aa18.83■□□□□ 0.6
SMPD1-209ENST00000533196 NHLRC3Q5JS37 347 aa18.83■□□□□ 0.6
SMPD1-209ENST00000533196 NR1H4Q96RI1 486 aaPredicted RBP18.83■□□□□ 0.6
SMPD1-209ENST00000533196 FAM192AQ9GZU8 254 aa18.83■□□□□ 0.6
SMPD1-209ENST00000533196 PPIL3Q9H2H8 161 aaKnown RBP18.83■□□□□ 0.6
SMPD1-209ENST00000533196 LIN7BQ9HAP6 207 aa18.83■□□□□ 0.6
SMPD1-209ENST00000533196 ZNF286AQ9HBT8 521 aa18.83■□□□□ 0.6
SMPD1-209ENST00000533196 FBXO24O75426 580 aa18.82■□□□□ 0.6
SMPD1-209ENST00000533196 CGB3P0DN86 165 aa18.82■□□□□ 0.6
SMPD1-209ENST00000533196 CGB7P0DN87 165 aa18.82■□□□□ 0.6
SMPD1-209ENST00000533196 C21orf33P30042 268 aaPredicted RBP18.82■□□□□ 0.6
SMPD1-209ENST00000533196 ZNF93P35789 620 aaPredicted RBP18.82■□□□□ 0.6
SMPD1-209ENST00000533196 GDNFP39905 211 aa18.82■□□□□ 0.6
SMPD1-209ENST00000533196 LRRC36Q1X8D7 754 aa18.82■□□□□ 0.6
SMPD1-209ENST00000533196 BAIAP2L2Q6UXY1 529 aa18.82■□□□□ 0.6
SMPD1-209ENST00000533196 WIPF2Q8TF74 440 aaPredicted RBP18.82■□□□□ 0.6
SMPD1-209ENST00000533196 WNT10AQ9GZT5 417 aa18.82■□□□□ 0.6
SMPD1-209ENST00000533196 METTL9Q9H1A3 318 aa18.82■□□□□ 0.6
SMPD1-209ENST00000533196 IFT22Q9H7X7 185 aa18.82■□□□□ 0.6
SMPD1-209ENST00000533196 LINC00574Q9H8X3 128 aa18.82■□□□□ 0.6
SMPD1-209ENST00000533196 PCDHB16Q9NRJ7 776 aa18.82■□□□□ 0.6
SMPD1-209ENST00000533196 PAK1IP1Q9NWT1 392 aaPredicted RBP18.82■□□□□ 0.6
SMPD1-209ENST00000533196 PLXNB1O43157 2135 aa18.82■□□□□ 0.6
SMPD1-209ENST00000533196 TRBV5-5A0A0J9YX44 114 aa18.81■□□□□ 0.6
SMPD1-209ENST00000533196 BUB1B-PAK6H3BSN5 160 aa18.81■□□□□ 0.6
SMPD1-209ENST00000533196 ZNF780AO75290 641 aaPredicted RBP18.81■□□□□ 0.6
SMPD1-209ENST00000533196 PEX14O75381 377 aa18.81■□□□□ 0.6
SMPD1-209ENST00000533196 GPX5O75715 221 aa18.81■□□□□ 0.6
SMPD1-209ENST00000533196 HTR3BO95264 441 aa18.81■□□□□ 0.6
SMPD1-209ENST00000533196 JUNBP17275 347 aaPredicted RBP18.81■□□□□ 0.6
SMPD1-209ENST00000533196 BDKRB2P30411 391 aa18.81■□□□□ 0.6
SMPD1-209ENST00000533196 HABP2Q14520 560 aaPredicted RBP18.81■□□□□ 0.6
SMPD1-209ENST00000533196 YIF1BQ5BJH7 314 aa18.81■□□□□ 0.6
SMPD1-209ENST00000533196 DDI2Q5TDH0 399 aa18.81■□□□□ 0.6
SMPD1-209ENST00000533196 DMKNQ6E0U4 476 aaPredicted RBP18.81■□□□□ 0.6
SMPD1-209ENST00000533196 CCDC144NLQ6NUI1 221 aa18.81■□□□□ 0.6
SMPD1-209ENST00000533196 LINC00596Q86U02 117 aa18.81■□□□□ 0.6
SMPD1-209ENST00000533196 C11orf44Q8N8P7 122 aa18.81■□□□□ 0.6
SMPD1-209ENST00000533196 OR10A7Q8NGE5 316 aa18.81■□□□□ 0.6
SMPD1-209ENST00000533196 OR9G1Q8NH87 305 aa18.81■□□□□ 0.6
SMPD1-209ENST00000533196 KIRREL1Q96J84 757 aa18.81■□□□□ 0.6
SMPD1-209ENST00000533196 S100A13Q99584 98 aa18.81■□□□□ 0.6
SMPD1-209ENST00000533196 ING3Q9NXR8 418 aa18.81■□□□□ 0.6
SMPD1-209ENST00000533196 KIF25Q9UIL4 384 aa18.81■□□□□ 0.6
SMPD1-209ENST00000533196 SIRT4Q9Y6E7 314 aaPredicted RBP18.81■□□□□ 0.6
SMPD1-209ENST00000533196 MEIKINA0A087WXM9 373 aa18.8■□□□□ 0.6
SMPD1-209ENST00000533196 GLP1RP43220 463 aa18.8■□□□□ 0.6
SMPD1-209ENST00000533196 TAS2R43P59537 309 aa18.8■□□□□ 0.6
SMPD1-209ENST00000533196 BLCAPP62952 87 aa18.8■□□□□ 0.6
SMPD1-209ENST00000533196 EMX1Q04741 257 aaPredicted RBP18.8■□□□□ 0.6
SMPD1-209ENST00000533196 RIPK1Q13546 671 aa18.8■□□□□ 0.6
SMPD1-209ENST00000533196 Q499Y3 187 aa18.8■□□□□ 0.6
SMPD1-209ENST00000533196 ARSJQ5FYB0 599 aaPredicted RBP18.8■□□□□ 0.6
SMPD1-209ENST00000533196 RSBN1Q5VWQ0 802 aaPredicted RBP18.8■□□□□ 0.6
SMPD1-209ENST00000533196 CAPSLQ8WWF8 208 aa18.8■□□□□ 0.6
SMPD1-209ENST00000533196 GHSRQ92847 366 aa18.8■□□□□ 0.6
SMPD1-209ENST00000533196 CNOT2Q9NZN8 540 aaKnown RBP18.8■□□□□ 0.6
SMPD1-209ENST00000533196 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.8■□□□□ 0.6
SMPD1-209ENST00000533196 CLEC2DQ9UHP7 191 aa18.8■□□□□ 0.6
SMPD1-209ENST00000533196 ST3GAL6Q9Y274 331 aa18.8■□□□□ 0.6
SMPD1-209ENST00000533196 EFCAB10A6NFE3 127 aa18.79■□□□□ 0.6
SMPD1-209ENST00000533196 LY6LH3BQJ8 138 aa18.79■□□□□ 0.6
SMPD1-209ENST00000533196 HSPB6O14558 160 aa18.79■□□□□ 0.6
SMPD1-209ENST00000533196 LALBAP00709 142 aa18.79■□□□□ 0.6
SMPD1-209ENST00000533196 IL1AP01583 271 aa18.79■□□□□ 0.6
SMPD1-209ENST00000533196 OPN1MWP04001 364 aa18.79■□□□□ 0.6
SMPD1-209ENST00000533196 CSTBP04080 98 aaKnown RBP18.79■□□□□ 0.6
SMPD1-209ENST00000533196 OPN1MW2P0DN77 364 aa18.79■□□□□ 0.6
SMPD1-209ENST00000533196 OPN1MW3P0DN78 364 aa18.79■□□□□ 0.6
SMPD1-209ENST00000533196 IGFBP3P17936 291 aaPredicted RBP18.79■□□□□ 0.6
SMPD1-209ENST00000533196 MNDAP41218 407 aa18.79■□□□□ 0.6
SMPD1-209ENST00000533196 VDAC2P45880 294 aaPredicted RBP18.79■□□□□ 0.6
SMPD1-209ENST00000533196 OR3A4PP47883 348 aa18.79■□□□□ 0.6
SMPD1-209ENST00000533196 PIGYQ3MUY2 71 aa18.79■□□□□ 0.6
SMPD1-209ENST00000533196 TPTE2P1Q5T6R2 138 aa18.79■□□□□ 0.6
SMPD1-209ENST00000533196 SLC16A12Q6ZSM3 486 aa18.79■□□□□ 0.6
SMPD1-209ENST00000533196 OSR2Q8N2R0 312 aa18.79■□□□□ 0.6
SMPD1-209ENST00000533196 ZNF485Q8NCK3 441 aa18.79■□□□□ 0.6
SMPD1-209ENST00000533196 OR13A1Q8NGR1 328 aa18.79■□□□□ 0.6
SMPD1-209ENST00000533196 OR10K1Q8NGX5 313 aa18.79■□□□□ 0.6
SMPD1-209ENST00000533196 GGHQ92820 318 aa18.79■□□□□ 0.6
SMPD1-209ENST00000533196 MMP28Q9H239 520 aa18.79■□□□□ 0.6
SMPD1-209ENST00000533196 CALYQ9NYX4 217 aa18.79■□□□□ 0.6
SMPD1-209ENST00000533196 CKLFQ9UBR5 152 aa18.79■□□□□ 0.6
SMPD1-209ENST00000533196 ING4Q9UNL4 249 aa18.79■□□□□ 0.6
SMPD1-209ENST00000533196 AMMECR1Q9Y4X0 333 aaPredicted RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms