RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 PKIBQ9C010 78 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 CST11Q9H112 138 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 DIABLOQ9NR28 239 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 MRPS7Q9Y2R9 242 aaKnown RBP9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 V9GYH0 126 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 TET2Q6N021 2002 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 TANC2Q9HCD6 1990 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 METTL21EPA6NDL7 271 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 ZNF780AO75290 641 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 KDM4BO94953 1096 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 CYB5AP00167 134 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 TNFRSF1AP19438 455 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 SERPINA2P20848 420 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 CDK2P24941 298 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 MPZP25189 248 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 PTBP1P26599 531 aaKnown RBP eCLIP9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 PITPNBP48739 271 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 GNB2P62879 340 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 RPS27AP62979 156 aaKnown RBP9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 MAB21L1Q13394 359 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 IL18Q14116 193 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 GPR176Q14439 515 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 HERPUD1Q15011 391 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 PYDC2Q56P42 97 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 Q6ZSV7 163 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 C11orf53Q8IXP5 236 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 SCCPDHQ8NBX0 429 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 OR51T1Q8NGJ9 327 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 AQP3Q92482 292 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 SLAMF9Q96A28 289 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 DACT3Q96B18 629 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 PHF21AQ96BD5 680 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 LPAR5Q9H1C0 372 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 PCDHB16Q9NRJ7 776 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 DCAF16Q9NXF7 216 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 MTCH1Q9NZJ7 389 aa9.31□□□□□ -0.92
TRAPPC4-213ENST00000533149 TRAV18A0A075B6X5 111 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 CEACAM18A8MTB9 384 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 CDIPTO14735 213 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 XRCC3O43542 346 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 RHBDL1O75783 438 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 HLA-DQB1P01920 261 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 CSTBP04080 98 aaKnown RBP9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 SFTPBP07988 381 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 CHRM2P08172 466 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 RPS2P15880 293 aaKnown RBP9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 MGMTP16455 207 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 BCL3P20749 454 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 TNFSF4P23510 183 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 CD40LGP29965 261 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 CD200P41217 278 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 NPBWR2P48146 333 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 VEGFCP49767 419 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 IL24Q13007 206 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 MPPED2Q15777 294 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 ZNF79Q15937 498 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 TMEM69Q5SWH9 247 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 PRAMEF6Q5VXH4 476 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 PYHIN1Q6K0P9 492 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 BAIAP2L2Q6UXY1 529 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 BATF2Q8N1L9 274 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 Q8NFD4 153 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 BORCS5Q969J3 196 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 MEGF10Q96KG7 1140 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 ZNF488Q96MN9 340 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 ABHD1Q96SE0 405 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 SDHCQ99643 169 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 NUDT16L1Q9BRJ7 211 aaKnown RBP9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 URM1Q9BTM9 101 aaKnown RBP9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 TMEM59Q9BXS4 323 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 SELENOIQ9C0D9 397 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 SRRQ9GZT4 340 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 DPAGT1Q9H3H5 408 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 FN3KRPQ9HA64 309 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 IL36GQ9NZH8 169 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 MIOXQ9UGB7 285 aa9.3□□□□□ -0.92
TRAPPC4-213ENST00000533149 A0A0A6YYD4 124 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 A6NLC8 198 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 F8VVB4 439 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 F8VWA3 439 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 RAB27BO00194 218 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 TSPAN9O75954 239 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 TPPPO94811 219 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 IGHV4-59P01825 116 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 GTF2F2P13984 249 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 MNDAP41218 407 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 IER3P46695 156 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 SRP9P49458 86 aaKnown RBP9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 TAS2R20P59543 309 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 FGF12P61328 243 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 PITPNAQ00169 270 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 MOGAT2Q3SYC2 334 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 SPRNQ5BIV9 151 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 ELP2Q6IA86 826 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 DHRS7BQ6IAN0 325 aaPredicted RBP9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 RAB12Q6IQ22 244 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 CCBE1Q6UXH8 406 aaPredicted RBP9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 ZNF826PQ6ZT77 177 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 NLRC3Q7RTR2 1065 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 OSR2Q8N2R0 312 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms