RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 TOX4O94842 621 aa10.65□□□□□ -0.7
TRAPPC4-212ENST00000533058 UBA52P62987 128 aaKnown RBP10.65□□□□□ -0.7
TRAPPC4-212ENST00000533058 C2orf76Q3KRA6 126 aa10.65□□□□□ -0.7
TRAPPC4-212ENST00000533058 NHLRC3Q5JS37 347 aa10.65□□□□□ -0.7
TRAPPC4-212ENST00000533058 GPR157Q5UAW9 335 aa10.65□□□□□ -0.7
TRAPPC4-212ENST00000533058 METTL11BQ5VVY1 283 aa10.65□□□□□ -0.7
TRAPPC4-212ENST00000533058 Q6P435 159 aa10.65□□□□□ -0.7
TRAPPC4-212ENST00000533058 SFXN4Q6P4A7 337 aa10.65□□□□□ -0.7
TRAPPC4-212ENST00000533058 C1orf122Q6ZSJ8 110 aa10.65□□□□□ -0.7
TRAPPC4-212ENST00000533058 OR2W3Q7Z3T1 314 aa10.65□□□□□ -0.7
TRAPPC4-212ENST00000533058 LINC00596Q86U02 117 aa10.65□□□□□ -0.7
TRAPPC4-212ENST00000533058 NR2C2APQ86WQ0 139 aa10.65□□□□□ -0.7
TRAPPC4-212ENST00000533058 OR8H2Q8N162 312 aa10.65□□□□□ -0.7
TRAPPC4-212ENST00000533058 KIR3DL3Q8N743 410 aa10.65□□□□□ -0.7
TRAPPC4-212ENST00000533058 Q8NFD4 153 aa10.65□□□□□ -0.7
TRAPPC4-212ENST00000533058 OR4S1Q8NGB4 309 aa10.65□□□□□ -0.7
TRAPPC4-212ENST00000533058 OR4M1Q8NGD0 313 aa10.65□□□□□ -0.7
TRAPPC4-212ENST00000533058 C1orf147Q96MC9 270 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC4-212ENST00000533058 ZNF48Q96MX3 618 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC4-212ENST00000533058 NEDD4LQ96PU5 975 aa10.65□□□□□ -0.7
TRAPPC4-212ENST00000533058 DCTN5Q9BTE1 182 aa10.65□□□□□ -0.7
TRAPPC4-212ENST00000533058 URM1Q9BTM9 101 aaKnown RBP10.65□□□□□ -0.7
TRAPPC4-212ENST00000533058 FAM234AQ9H0X4 552 aa10.65□□□□□ -0.7
TRAPPC4-212ENST00000533058 LIN7BQ9HAP6 207 aa10.65□□□□□ -0.7
TRAPPC4-212ENST00000533058 SEBOXQ9HB31 216 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC4-212ENST00000533058 ONECUT1Q9UBC0 465 aa10.65□□□□□ -0.7
TRAPPC4-212ENST00000533058 A0A0G2JK05 382 aa10.64□□□□□ -0.71
TRAPPC4-212ENST00000533058 CENPVL3A0A0U1RRI6 287 aa10.64□□□□□ -0.71
TRAPPC4-212ENST00000533058 SLC33A1O00400 549 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC4-212ENST00000533058 PSPNO60542 156 aa10.64□□□□□ -0.71
TRAPPC4-212ENST00000533058 GABARAPO95166 117 aa10.64□□□□□ -0.71
TRAPPC4-212ENST00000533058 IL1AP01583 271 aa10.64□□□□□ -0.71
TRAPPC4-212ENST00000533058 CD37P11049 281 aa10.64□□□□□ -0.71
TRAPPC4-212ENST00000533058 RPS19P39019 145 aaKnown RBP10.64□□□□□ -0.71
TRAPPC4-212ENST00000533058 OR3A1P47881 315 aa10.64□□□□□ -0.71
TRAPPC4-212ENST00000533058 RPL31P62899 125 aaKnown RBP10.64□□□□□ -0.71
TRAPPC4-212ENST00000533058 RPS27AP62979 156 aaKnown RBP10.64□□□□□ -0.71
TRAPPC4-212ENST00000533058 ATXN7L3Q14CW9 347 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC4-212ENST00000533058 MPV17LQ2QL34 196 aa10.64□□□□□ -0.71
TRAPPC4-212ENST00000533058 NKAPLQ5M9Q1 402 aa10.64□□□□□ -0.71
TRAPPC4-212ENST00000533058 C17orf107Q6ZR85 190 aa10.64□□□□□ -0.71
TRAPPC4-212ENST00000533058 SLC16A12Q6ZSM3 486 aa10.64□□□□□ -0.71
TRAPPC4-212ENST00000533058 Q96M66 194 aa10.64□□□□□ -0.71
TRAPPC4-212ENST00000533058 PCGF1Q9BSM1 259 aa10.64□□□□□ -0.71
TRAPPC4-212ENST00000533058 DPCDQ9BVM2 203 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC4-212ENST00000533058 TRBV23-1A0A0A0MS06 115 aa10.63□□□□□ -0.71
TRAPPC4-212ENST00000533058 TRAV24A0A0B4J272 114 aa10.63□□□□□ -0.71
TRAPPC4-212ENST00000533058 TMEM272A0A1B0GTI8 110 aa10.63□□□□□ -0.71
TRAPPC4-212ENST00000533058 FUOMA2VDF0 154 aa10.63□□□□□ -0.71
TRAPPC4-212ENST00000533058 TMEM14DPA8MWL7 114 aa10.63□□□□□ -0.71
TRAPPC4-212ENST00000533058 H3BUI4 141 aa10.63□□□□□ -0.71
TRAPPC4-212ENST00000533058 MGST3O14880 152 aa10.63□□□□□ -0.71
TRAPPC4-212ENST00000533058 ZNF737O75373 536 aa10.63□□□□□ -0.71
TRAPPC4-212ENST00000533058 RNASE1P07998 156 aaKnown RBP10.63□□□□□ -0.71
TRAPPC4-212ENST00000533058 SNRPBP14678 240 aaKnown RBP10.63□□□□□ -0.71
TRAPPC4-212ENST00000533058 ARF6P62330 175 aa10.63□□□□□ -0.71
TRAPPC4-212ENST00000533058 BAMBIQ13145 260 aa10.63□□□□□ -0.71
TRAPPC4-212ENST00000533058 UNC119Q13432 240 aa10.63□□□□□ -0.71
TRAPPC4-212ENST00000533058 BRICD5Q6PL45 260 aa10.63□□□□□ -0.71
TRAPPC4-212ENST00000533058 TRAPPC6BQ86SZ2 158 aa10.63□□□□□ -0.71
TRAPPC4-212ENST00000533058 CROCCP3Q8IVE0 287 aa10.63□□□□□ -0.71
TRAPPC4-212ENST00000533058 CMTM4Q8IZR5 234 aa10.63□□□□□ -0.71
TRAPPC4-212ENST00000533058 TPRX1Q8N7U7 411 aa10.63□□□□□ -0.71
TRAPPC4-212ENST00000533058 SUMF2Q8NBJ7 301 aa10.63□□□□□ -0.71
TRAPPC4-212ENST00000533058 RAB2BQ8WUD1 216 aa10.63□□□□□ -0.71
TRAPPC4-212ENST00000533058 UNKLQ9H9P5 680 aaKnown RBP10.63□□□□□ -0.71
TRAPPC4-212ENST00000533058 SPACA1Q9HBV2 294 aa10.63□□□□□ -0.71
TRAPPC4-212ENST00000533058 ZNF581Q9P0T4 197 aa10.63□□□□□ -0.71
TRAPPC4-212ENST00000533058 RAB22AQ9UL26 194 aa10.63□□□□□ -0.71
TRAPPC4-212ENST00000533058 PEX16Q9Y5Y5 336 aa10.63□□□□□ -0.71
TRAPPC4-212ENST00000533058 ANK2Q01484 3957 aa10.63□□□□□ -0.71
TRAPPC4-212ENST00000533058 IGHV3OR16-10A0A075B7F0 116 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 IGHV1-69DA0A0B4J2H0 117 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 A0A1W2PPH5 198 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 MEX3AA1L020 520 aaKnown RBP10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 FAM90A10PA6NDY2 464 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 FAM90A18PA6NE21 464 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 FAM90A16PA6NEW6 464 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 DNAJC9-AS1A6NH13 148 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 FAM90A20PA6NIJ5 464 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 FAM90A8PA6NJQ4 464 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 FAM90A7PA6NKC0 464 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 FAM90A22PA8MWA6 464 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 FAM90A12PA8MX19 464 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 FAM90A5PA8MXJ8 464 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 FAM90A23PA8MXZ1 464 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 MCRIP1C9JLW8 97 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 M0R1W7 72 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 IGHV1-69P01742 117 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 FAM90A15PP0C7V4 464 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 FAM90A13PP0C7W8 464 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 FAM90A14PP0C7W9 464 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 FAM90A24PP0C7X0 464 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 FUT3P21217 361 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 LMO1P25800 156 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 BLVRBP30043 206 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 TMBIM6P55061 237 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 ACTG1P63261 375 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 QRFPP83859 136 aa10.62□□□□□ -0.71
TRAPPC4-212ENST00000533058 AESQ08117 197 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms