RNA–Protein interactions for RNA: ENST00000532678.1

PUM1-223, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-223	ENST00000532678	DUSP1	P28562	367 aa		6.62	□□□□□ -1.35
PUM1-223	ENST00000532678	BMX	P51813	675 aa		6.62	□□□□□ -1.35
PUM1-223	ENST00000532678	CAV3	P56539	151 aa		6.62	□□□□□ -1.35
PUM1-223	ENST00000532678	PAX2	Q02962	417 aa		6.62	□□□□□ -1.35
PUM1-223	ENST00000532678	ZNF146	Q15072	292 aa		6.62	□□□□□ -1.35
PUM1-223	ENST00000532678	PIGY	Q3MUY2	71 aa		6.62	□□□□□ -1.35
PUM1-223	ENST00000532678	CD276	Q5ZPR3	534 aa		6.62	□□□□□ -1.35
PUM1-223	ENST00000532678	GLT8D1	Q68CQ7	371 aa		6.62	□□□□□ -1.35
PUM1-223	ENST00000532678	C22orf42	Q6IC83	251 aa		6.62	□□□□□ -1.35
PUM1-223	ENST00000532678	GLIPR1L1	Q6UWM5	242 aa		6.62	□□□□□ -1.35
PUM1-223	ENST00000532678	ASCL4	Q6XD76	172 aa		6.62	□□□□□ -1.35
PUM1-223	ENST00000532678	LYPD6	Q86Y78	171 aa		6.62	□□□□□ -1.35
PUM1-223	ENST00000532678	CDH26	Q8IXH8	852 aa		6.62	□□□□□ -1.35
PUM1-223	ENST00000532678	OR4D6	Q8NGJ1	314 aa		6.62	□□□□□ -1.35
PUM1-223	ENST00000532678	RAB40A	Q8WXH6	277 aa		6.62	□□□□□ -1.35
PUM1-223	ENST00000532678	DACT3	Q96B18	629 aa	Predicted RBP	6.62	□□□□□ -1.35
PUM1-223	ENST00000532678	NR1H4	Q96RI1	486 aa	Predicted RBP	6.62	□□□□□ -1.35
PUM1-223	ENST00000532678	GFI1	Q99684	422 aa		6.62	□□□□□ -1.35
PUM1-223	ENST00000532678	UQCC2	Q9BRT2	126 aa		6.62	□□□□□ -1.35
PUM1-223	ENST00000532678	DCTN5	Q9BTE1	182 aa		6.62	□□□□□ -1.35
PUM1-223	ENST00000532678	MRI1	Q9BV20	369 aa		6.62	□□□□□ -1.35
PUM1-223	ENST00000532678	GLS2	Q9UI32	602 aa		6.62	□□□□□ -1.35
PUM1-223	ENST00000532678	TRAV40	A0A0B4J280	105 aa		6.61	□□□□□ -1.35
PUM1-223	ENST00000532678		A0A1W2PP11	408 aa		6.61	□□□□□ -1.35
PUM1-223	ENST00000532678		A0A1W2PQ09	198 aa		6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	TRIM64C	A6NLI5	447 aa		6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	SH2D1B	O14796	132 aa		6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	ZNF780A	O75290	641 aa	Predicted RBP	6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	ZNF737	O75373	536 aa		6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	ECD	O95905	644 aa	Predicted RBP	6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	OR2H2	O95918	312 aa		6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	CSTB	P04080	98 aa	Known RBP	6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	TK1	P04183	234 aa		6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	HKR1	P10072	659 aa		6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	CD36	P16671	472 aa		6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	GADD45A	P24522	165 aa		6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	RBM11	P57052	281 aa	Known RBP	6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	SCN1B	Q07699	218 aa		6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	PDCD1	Q15116	288 aa		6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	SLC22A6	Q4U2R8	563 aa		6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	ELP2	Q6IA86	826 aa		6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	FAM185A	Q8N0U4	392 aa		6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	OR8H2	Q8N162	312 aa		6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	OSR2	Q8N2R0	312 aa		6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	LILRB2	Q8N423	598 aa		6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	TEX29	Q8N6K0	151 aa		6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	TBC1D15	Q8TC07	691 aa		6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	FOXRED1	Q96CU9	486 aa	Predicted RBP	6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	CHCHD6	Q9BRQ6	235 aa		6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	CHST6	Q9GZX3	395 aa		6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	FAM234A	Q9H0X4	552 aa		6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	OR51E2	Q9H255	320 aa		6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	PPA2	Q9H2U2	334 aa		6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	UNKL	Q9H9P5	680 aa	Known RBP	6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	PLGRKT	Q9HBL7	147 aa		6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	C19orf12	Q9NSK7	152 aa		6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	TXNL4B	Q9NX01	149 aa	Known RBP	6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	ONECUT1	Q9UBC0	465 aa		6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	RPUSD1	Q9UJJ7	312 aa	Known RBP	6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	NUP50	Q9UKX7	468 aa		6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	SSR3	Q9UNL2	185 aa		6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	AK6	Q9Y3D8	172 aa	Known RBP	6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	AUP1	Q9Y679	476 aa		6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	DOCK11	Q5JSL3	2073 aa		6.61	□□□□□ -1.35
PUM1-223	ENST00000532678	LOC100506127	A0A0U1RQW1	187 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	KIR2DS1	A0A191URI9	304 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	SMIM30	A4D0T7	59 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678		K7N7A8	449 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	SLC33A1	O00400	549 aa	Predicted RBP	6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	HSPB6	O14558	160 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	PDCD5	O14737	125 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	CRTAP	O75718	401 aa	Predicted RBP	6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	PPIAL4G	P0DN37	164 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	GTF2F2	P13984	249 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	OMG	P23515	440 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	HTR2C	P28335	458 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	OR3A1	P47881	315 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	EDDM3B	P56851	147 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	OR10A3	P58181	314 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	BAMBI	Q13145	260 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	GPR176	Q14439	515 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	EDDM3A	Q14507	147 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	IL13RA2	Q14627	380 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	ATXN7L3	Q14CW9	347 aa	Predicted RBP	6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	GRK1	Q15835	563 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	NHLRC3	Q5JS37	347 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	C1orf100	Q5SVJ3	147 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678		Q6P435	159 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	C17orf107	Q6ZR85	190 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	GDPD3	Q7L5L3	318 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	CHST4	Q8NCG5	386 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	TMEM104	Q8NE00	496 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678		Q8NFD4	153 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	OR4S1	Q8NGB4	309 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	OR4M1	Q8NGD0	313 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	OR51T1	Q8NGJ9	327 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	OR6M1	Q8NGM8	313 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	SGMS2	Q8NHU3	365 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	C8orf46	Q8TAG6	207 aa		6.6	□□□□□ -1.35
PUM1-223	ENST00000532678	FAM46B	Q96A09	425 aa		6.6	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms