RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 ZMIZ1Q9ULJ6 1067 aa12.96□□□□□ -0.33
PCDHA9-202ENST00000532602 STARD10Q9Y365 291 aa12.96□□□□□ -0.33
PCDHA9-202ENST00000532602 NGFRP08138 427 aa12.96□□□□□ -0.34
PCDHA9-202ENST00000532602 XAF1Q6GPH4 301 aa12.96□□□□□ -0.34
PCDHA9-202ENST00000532602 FRRS1LQ9P0K9 344 aa12.96□□□□□ -0.34
PCDHA9-202ENST00000532602 AMTP48728 403 aa12.96□□□□□ -0.34
PCDHA9-202ENST00000532602 KCNMB1Q16558 191 aa12.96□□□□□ -0.34
PCDHA9-202ENST00000532602 SSX7Q7RTT5 188 aa12.96□□□□□ -0.34
PCDHA9-202ENST00000532602 OR2C3Q8N628 320 aa12.96□□□□□ -0.34
PCDHA9-202ENST00000532602 OR1L1Q8NH94 360 aa12.96□□□□□ -0.34
PCDHA9-202ENST00000532602 FOXJ2Q9P0K8 574 aa12.96□□□□□ -0.34
PCDHA9-202ENST00000532602 PIPOXQ9P0Z9 390 aa12.96□□□□□ -0.34
PCDHA9-202ENST00000532602 PCDHGA9Q9Y5G4 932 aaKnown RBP12.96□□□□□ -0.34
PCDHA9-202ENST00000532602 PPIAL4EA0A075B759 164 aa12.95□□□□□ -0.34
PCDHA9-202ENST00000532602 PPIAL4DF5H284 164 aa12.95□□□□□ -0.34
PCDHA9-202ENST00000532602 PPIAL4FP0DN26 164 aa12.95□□□□□ -0.34
PCDHA9-202ENST00000532602 RPS4XP62701 263 aaKnown RBP12.95□□□□□ -0.34
PCDHA9-202ENST00000532602 PPP1R1AQ13522 171 aa12.95□□□□□ -0.34
PCDHA9-202ENST00000532602 DMKNQ6E0U4 476 aaPredicted RBP12.95□□□□□ -0.34
PCDHA9-202ENST00000532602 MDP1Q86V88 176 aa12.95□□□□□ -0.34
PCDHA9-202ENST00000532602 ZPLD1Q8TCW7 415 aa12.95□□□□□ -0.34
PCDHA9-202ENST00000532602 PPIAL4AQ9Y536 164 aa12.95□□□□□ -0.34
PCDHA9-202ENST00000532602 NPTNQ9Y639 398 aa12.95□□□□□ -0.34
PCDHA9-202ENST00000532602 HOXA4Q00056 320 aaPredicted RBP12.95□□□□□ -0.34
PCDHA9-202ENST00000532602 GGNBP1Q5YKI7 109 aa12.95□□□□□ -0.34
PCDHA9-202ENST00000532602 DHRS7BQ6IAN0 325 aaPredicted RBP12.95□□□□□ -0.34
PCDHA9-202ENST00000532602 MRPL22Q9NWU5 206 aaKnown RBP12.95□□□□□ -0.34
PCDHA9-202ENST00000532602 PILRAQ9UKJ1 303 aa12.95□□□□□ -0.34
PCDHA9-202ENST00000532602 PRNDQ9UKY0 176 aa12.95□□□□□ -0.34
PCDHA9-202ENST00000532602 FGF5P12034 268 aa12.95□□□□□ -0.34
PCDHA9-202ENST00000532602 CDC34P49427 236 aaPredicted RBP12.95□□□□□ -0.34
PCDHA9-202ENST00000532602 FAM214BQ7L5A3 538 aa12.95□□□□□ -0.34
PCDHA9-202ENST00000532602 ZBTB34Q8NCN2 500 aa12.95□□□□□ -0.34
PCDHA9-202ENST00000532602 TMEM18Q96B42 140 aa12.95□□□□□ -0.34
PCDHA9-202ENST00000532602 TRPM7Q96QT4 1865 aa12.95□□□□□ -0.34
PCDHA9-202ENST00000532602 C4orf51C9J302 202 aa12.95□□□□□ -0.34
PCDHA9-202ENST00000532602 RNF133Q8WVZ7 376 aa12.95□□□□□ -0.34
PCDHA9-202ENST00000532602 MSL2Q9HCI7 577 aa12.95□□□□□ -0.34
PCDHA9-202ENST00000532602 MAP1LC3B2A6NCE7 125 aa12.95□□□□□ -0.34
PCDHA9-202ENST00000532602 PAFAH1B2P68402 229 aa12.95□□□□□ -0.34
PCDHA9-202ENST00000532602 FAHD2BQ6P2I3 314 aaPredicted RBP12.95□□□□□ -0.34
PCDHA9-202ENST00000532602 FLYWCH2Q96CP2 140 aaKnown RBP12.95□□□□□ -0.34
PCDHA9-202ENST00000532602 FAHD2AQ96GK7 314 aa12.95□□□□□ -0.34
PCDHA9-202ENST00000532602 MAP1LC3BQ9GZQ8 125 aa12.95□□□□□ -0.34
PCDHA9-202ENST00000532602 PCM1Q15154 2024 aa12.94□□□□□ -0.34
PCDHA9-202ENST00000532602 NUP214P35658 2090 aaPredicted RBP12.94□□□□□ -0.34
PCDHA9-202ENST00000532602 SCN10AQ9Y5Y9 1956 aa12.94□□□□□ -0.34
PCDHA9-202ENST00000532602 A0A1W2PQM1 296 aa12.94□□□□□ -0.34
PCDHA9-202ENST00000532602 OR5AC1P0C628 307 aa12.94□□□□□ -0.34
PCDHA9-202ENST00000532602 RAB5AP20339 215 aa12.94□□□□□ -0.34
PCDHA9-202ENST00000532602 PMELP40967 661 aa12.94□□□□□ -0.34
PCDHA9-202ENST00000532602 ZNF680Q8NEM1 530 aa12.94□□□□□ -0.34
PCDHA9-202ENST00000532602 SLC25A22Q9H936 323 aa12.94□□□□□ -0.34
PCDHA9-202ENST00000532602 OGG1O15527 345 aa12.94□□□□□ -0.34
PCDHA9-202ENST00000532602 SLC6A1P30531 599 aa12.94□□□□□ -0.34
PCDHA9-202ENST00000532602 MS4A7Q9GZW8 240 aaPredicted RBP12.94□□□□□ -0.34
PCDHA9-202ENST00000532602 PRR13Q9NZ81 148 aa12.94□□□□□ -0.34
PCDHA9-202ENST00000532602 LOC102723971A0A1B0GUV8 181 aa12.94□□□□□ -0.34
PCDHA9-202ENST00000532602 C9orf170A2RU37 121 aa12.94□□□□□ -0.34
PCDHA9-202ENST00000532602 PRR33A8MZF0 331 aa12.94□□□□□ -0.34
PCDHA9-202ENST00000532602 PLPPR5Q32ZL2 321 aa12.94□□□□□ -0.34
PCDHA9-202ENST00000532602 SLC2A8Q9NY64 477 aa12.94□□□□□ -0.34
PCDHA9-202ENST00000532602 CYB5R1Q9UHQ9 305 aa12.94□□□□□ -0.34
PCDHA9-202ENST00000532602 ORM2P19652 201 aa12.93□□□□□ -0.34
PCDHA9-202ENST00000532602 IL24Q13007 206 aa12.93□□□□□ -0.34
PCDHA9-202ENST00000532602 Q8WTZ3 238 aa12.93□□□□□ -0.34
PCDHA9-202ENST00000532602 RHOFQ9HBH0 211 aa12.93□□□□□ -0.34
PCDHA9-202ENST00000532602 TMEM167BQ9NRX6 74 aa12.93□□□□□ -0.34
PCDHA9-202ENST00000532602 RNASEK-C17orf49H0YIS7 233 aa12.93□□□□□ -0.34
PCDHA9-202ENST00000532602 GNG4P50150 75 aa12.93□□□□□ -0.34
PCDHA9-202ENST00000532602 NFAM1Q8NET5 270 aaPredicted RBP12.93□□□□□ -0.34
PCDHA9-202ENST00000532602 DYRK2Q92630 601 aa12.93□□□□□ -0.34
PCDHA9-202ENST00000532602 NOL4LQ96MY1 436 aaPredicted RBP12.93□□□□□ -0.34
PCDHA9-202ENST00000532602 FAM103A1Q9BTL3 118 aaKnown RBP12.93□□□□□ -0.34
PCDHA9-202ENST00000532602 TIAF1O95411 115 aa12.93□□□□□ -0.34
PCDHA9-202ENST00000532602 MMP16P51512 607 aa12.93□□□□□ -0.34
PCDHA9-202ENST00000532602 CDCP2Q5VXM1 449 aa12.93□□□□□ -0.34
PCDHA9-202ENST00000532602 SF3B6Q9Y3B4 125 aaKnown RBP12.93□□□□□ -0.34
PCDHA9-202ENST00000532602 ARL2-SNX15V9GYD0 113 aa12.93□□□□□ -0.34
PCDHA9-202ENST00000532602 ALX3O95076 343 aa12.93□□□□□ -0.34
PCDHA9-202ENST00000532602 DUSP18Q8NEJ0 188 aa12.93□□□□□ -0.34
PCDHA9-202ENST00000532602 ZNF596Q8TC21 504 aa12.93□□□□□ -0.34
PCDHA9-202ENST00000532602 WISP3O95389 354 aaPredicted RBP12.93□□□□□ -0.34
PCDHA9-202ENST00000532602 RPL13AP40429 203 aaKnown RBP12.93□□□□□ -0.34
PCDHA9-202ENST00000532602 RSPO4Q2I0M5 234 aaPredicted RBP12.93□□□□□ -0.34
PCDHA9-202ENST00000532602 DGAT2L7PQ6IED9 249 aa12.93□□□□□ -0.34
PCDHA9-202ENST00000532602 SPNS3Q6ZMD2 512 aa12.93□□□□□ -0.34
PCDHA9-202ENST00000532602 MYPOPQ86VE0 399 aaPredicted RBP12.93□□□□□ -0.34
PCDHA9-202ENST00000532602 TMEM251Q8N6I4 163 aa12.93□□□□□ -0.34
PCDHA9-202ENST00000532602 DYNLRB2Q8TF09 96 aa12.93□□□□□ -0.34
PCDHA9-202ENST00000532602 TRAV39A0A0B4J263 110 aa12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 LNP1A1A4G5 178 aa12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 GEMIN2O14893 280 aaKnown RBP12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 UPK3AO75631 287 aa12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 VDAC1P21796 283 aa12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 LTBRP36941 435 aa12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 ACAA2P42765 397 aaKnown RBP12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 CLEC5AQ9NY25 188 aa12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 IFNL4K9M1U5 179 aa12.92□□□□□ -0.34
PCDHA9-202ENST00000532602 SYNGR2O43760 224 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms