RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 FBXO17Q96EF6 278 aa13.36□□□□□ -0.27
PCDHA3-202ENST00000532566 CCL28Q9NRJ3 127 aa13.36□□□□□ -0.27
PCDHA3-202ENST00000532566 PRF1P14222 555 aa13.35□□□□□ -0.27
PCDHA3-202ENST00000532566 CHRNB4P30926 498 aa13.35□□□□□ -0.27
PCDHA3-202ENST00000532566 LYZL2Q7Z4W2 148 aa13.35□□□□□ -0.27
PCDHA3-202ENST00000532566 DDA1Q9BW61 102 aa13.35□□□□□ -0.27
PCDHA3-202ENST00000532566 RPL36A-HNRNPH2H7BZ11 118 aa13.35□□□□□ -0.27
PCDHA3-202ENST00000532566 CA11O75493 328 aa13.35□□□□□ -0.27
PCDHA3-202ENST00000532566 LY86O95711 162 aa13.35□□□□□ -0.27
PCDHA3-202ENST00000532566 ADRA2AP08913 450 aa13.35□□□□□ -0.27
PCDHA3-202ENST00000532566 IL24Q13007 206 aa13.35□□□□□ -0.27
PCDHA3-202ENST00000532566 NCR3LG1Q68D85 454 aa13.35□□□□□ -0.27
PCDHA3-202ENST00000532566 AQP3Q92482 292 aa13.35□□□□□ -0.27
PCDHA3-202ENST00000532566 FCGR3AP08637 254 aa13.35□□□□□ -0.27
PCDHA3-202ENST00000532566 FOXC1Q12948 553 aa13.35□□□□□ -0.27
PCDHA3-202ENST00000532566 OR10AD1Q8NGE0 317 aa13.35□□□□□ -0.27
PCDHA3-202ENST00000532566 CMTM2Q8TAZ6 248 aa13.35□□□□□ -0.27
PCDHA3-202ENST00000532566 SOX7Q9BT81 388 aa13.35□□□□□ -0.27
PCDHA3-202ENST00000532566 SLC35B3Q9H1N7 401 aa13.35□□□□□ -0.27
PCDHA3-202ENST00000532566 OSGIN2Q9Y236 505 aa13.35□□□□□ -0.27
PCDHA3-202ENST00000532566 POMT1Q9Y6A1 747 aa13.35□□□□□ -0.27
PCDHA3-202ENST00000532566 TGOLN2O43493 480 aa13.35□□□□□ -0.27
PCDHA3-202ENST00000532566 OR7C2O60412 319 aa13.35□□□□□ -0.27
PCDHA3-202ENST00000532566 GPR132Q9UNW8 380 aa13.35□□□□□ -0.27
PCDHA3-202ENST00000532566 PTPRDP23468 1912 aa13.34□□□□□ -0.27
PCDHA3-202ENST00000532566 SPAARA0A1B0GVQ0 90 aa13.34□□□□□ -0.27
PCDHA3-202ENST00000532566 TMEM218A2RU14 115 aa13.34□□□□□ -0.27
PCDHA3-202ENST00000532566 SSX2Q16385 188 aa13.34□□□□□ -0.27
PCDHA3-202ENST00000532566 LYPD8Q6UX82 237 aa13.34□□□□□ -0.27
PCDHA3-202ENST00000532566 TMEM108Q6UXF1 575 aa13.34□□□□□ -0.27
PCDHA3-202ENST00000532566 ZNF574Q6ZN55 896 aaPredicted RBP13.34□□□□□ -0.27
PCDHA3-202ENST00000532566 GMPPAQ96IJ6 420 aaPredicted RBP13.34□□□□□ -0.27
PCDHA3-202ENST00000532566 LPAR3Q9UBY5 353 aa13.34□□□□□ -0.27
PCDHA3-202ENST00000532566 IGHV3-43A0A0B4J1X8 118 aa13.34□□□□□ -0.27
PCDHA3-202ENST00000532566 HRASP01112 189 aa13.34□□□□□ -0.27
PCDHA3-202ENST00000532566 IGHV3-43DP0DP04 118 aa13.34□□□□□ -0.27
PCDHA3-202ENST00000532566 INO80CQ6PI98 192 aaPredicted RBP13.34□□□□□ -0.27
PCDHA3-202ENST00000532566 LRRC75AQ8NAA5 344 aa13.34□□□□□ -0.27
PCDHA3-202ENST00000532566 RALGAPA1Q6GYQ0 2036 aa13.34□□□□□ -0.27
PCDHA3-202ENST00000532566 SYNGR2O43760 224 aa13.34□□□□□ -0.27
PCDHA3-202ENST00000532566 ARL3P36405 182 aa13.34□□□□□ -0.27
PCDHA3-202ENST00000532566 C19orf57Q0VDD7 668 aa13.34□□□□□ -0.27
PCDHA3-202ENST00000532566 MDP1Q86V88 176 aa13.34□□□□□ -0.27
PCDHA3-202ENST00000532566 LYG1Q8N1E2 194 aa13.34□□□□□ -0.27
PCDHA3-202ENST00000532566 STPG2Q8N412 459 aa13.34□□□□□ -0.27
PCDHA3-202ENST00000532566 LOXL4Q96JB6 756 aa13.34□□□□□ -0.27
PCDHA3-202ENST00000532566 ZNF355PQ9NSJ1 428 aa13.34□□□□□ -0.27
PCDHA3-202ENST00000532566 LYPD3O95274 346 aa13.34□□□□□ -0.27
PCDHA3-202ENST00000532566 FABP1P07148 127 aa13.34□□□□□ -0.27
PCDHA3-202ENST00000532566 HLA-DRB3P79483 266 aa13.34□□□□□ -0.27
PCDHA3-202ENST00000532566 CLEC9AQ6UXN8 241 aa13.34□□□□□ -0.27
PCDHA3-202ENST00000532566 SLC25A40Q8TBP6 338 aa13.34□□□□□ -0.27
PCDHA3-202ENST00000532566 POM121L2Q96KW2 1035 aa13.34□□□□□ -0.27
PCDHA3-202ENST00000532566 NIT2Q9NQR4 276 aa13.34□□□□□ -0.27
PCDHA3-202ENST00000532566 MED19A0JLT2 244 aaPredicted RBP13.33□□□□□ -0.28
PCDHA3-202ENST00000532566 NDUFB3O43676 98 aa13.33□□□□□ -0.28
PCDHA3-202ENST00000532566 RPS11P62280 158 aaKnown RBP eCLIP13.33□□□□□ -0.28
PCDHA3-202ENST00000532566 TIGITQ495A1 244 aa13.33□□□□□ -0.28
PCDHA3-202ENST00000532566 ZNF429Q86V71 674 aa13.33□□□□□ -0.28
PCDHA3-202ENST00000532566 BAGE3Q86Y29 109 aa13.33□□□□□ -0.28
PCDHA3-202ENST00000532566 BAGE2Q86Y30 109 aa13.33□□□□□ -0.28
PCDHA3-202ENST00000532566 OR51I2Q9H344 312 aa13.33□□□□□ -0.28
PCDHA3-202ENST00000532566 C3orf80F5H4A9 247 aa13.33□□□□□ -0.28
PCDHA3-202ENST00000532566 HAND1O96004 215 aa13.33□□□□□ -0.28
PCDHA3-202ENST00000532566 TNFAIP6P98066 277 aaPredicted RBP13.33□□□□□ -0.28
PCDHA3-202ENST00000532566 OR11H4Q8NGC9 324 aa13.33□□□□□ -0.28
PCDHA3-202ENST00000532566 OR13D1Q8NGV5 346 aa13.33□□□□□ -0.28
PCDHA3-202ENST00000532566 SLC26A1Q9H2B4 701 aa13.33□□□□□ -0.28
PCDHA3-202ENST00000532566 MTCH1Q9NZJ7 389 aa13.33□□□□□ -0.28
PCDHA3-202ENST00000532566 AMDHD2Q9Y303 409 aa13.33□□□□□ -0.28
PCDHA3-202ENST00000532566 OR2W1Q9Y3N9 320 aa13.33□□□□□ -0.28
PCDHA3-202ENST00000532566 TCF20Q9UGU0 1960 aaKnown RBP13.33□□□□□ -0.28
PCDHA3-202ENST00000532566 RIF1Q5UIP0 2472 aaKnown RBP13.33□□□□□ -0.28
PCDHA3-202ENST00000532566 CHST1O43916 411 aa13.33□□□□□ -0.28
PCDHA3-202ENST00000532566 RAB7AP51149 207 aa13.33□□□□□ -0.28
PCDHA3-202ENST00000532566 LRRC10Q5BKY1 277 aa13.33□□□□□ -0.28
PCDHA3-202ENST00000532566 NECAP1Q8NC96 275 aa13.33□□□□□ -0.28
PCDHA3-202ENST00000532566 OR6C3Q9NZP0 311 aa13.33□□□□□ -0.28
PCDHA3-202ENST00000532566 ST8SIA5O15466 376 aa13.32□□□□□ -0.28
PCDHA3-202ENST00000532566 SCGB1D1O95968 90 aa13.32□□□□□ -0.28
PCDHA3-202ENST00000532566 OR5G3P0C626 314 aa13.32□□□□□ -0.28
PCDHA3-202ENST00000532566 PMELP40967 661 aa13.32□□□□□ -0.28
PCDHA3-202ENST00000532566 LINC00596Q86U02 117 aa13.32□□□□□ -0.28
PCDHA3-202ENST00000532566 OR5D13Q8NGL4 314 aa13.32□□□□□ -0.28
PCDHA3-202ENST00000532566 DHRS7CA6NNS2 312 aa13.32□□□□□ -0.28
PCDHA3-202ENST00000532566 ADH4P08319 380 aa13.32□□□□□ -0.28
PCDHA3-202ENST00000532566 FAM219AQ8IW50 185 aa13.32□□□□□ -0.28
PCDHA3-202ENST00000532566 OR4A4PQ8NGN8 299 aa13.32□□□□□ -0.28
PCDHA3-202ENST00000532566 MAP1LC3B2A6NCE7 125 aa13.32□□□□□ -0.28
PCDHA3-202ENST00000532566 EFNB1P98172 346 aa13.32□□□□□ -0.28
PCDHA3-202ENST00000532566 CEACAM21Q3KPI0 293 aa13.32□□□□□ -0.28
PCDHA3-202ENST00000532566 BHLHA15Q7RTS1 189 aaPredicted RBP13.32□□□□□ -0.28
PCDHA3-202ENST00000532566 C17orf78Q8N4C9 275 aa13.32□□□□□ -0.28
PCDHA3-202ENST00000532566 AP1S3Q96PC3 154 aa13.32□□□□□ -0.28
PCDHA3-202ENST00000532566 MAP1LC3BQ9GZQ8 125 aa13.32□□□□□ -0.28
PCDHA3-202ENST00000532566 NKX2-6A6NCS4 301 aa13.32□□□□□ -0.28
PCDHA3-202ENST00000532566 TMEM14DPA8MWL7 114 aa13.32□□□□□ -0.28
PCDHA3-202ENST00000532566 NMBP08949 121 aa13.32□□□□□ -0.28
PCDHA3-202ENST00000532566 SLC23A3Q6PIS1 610 aa13.32□□□□□ -0.28
PCDHA3-202ENST00000532566 NR2C2APQ86WQ0 139 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms