RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 SPNS3Q6ZMD2 512 aa10.38□□□□□ -0.75
COPB1-208ENST00000532088 LINC00299Q6ZSB3 139 aa10.38□□□□□ -0.75
COPB1-208ENST00000532088 FAM216BQ8N7L0 139 aa10.38□□□□□ -0.75
COPB1-208ENST00000532088 SUMF2Q8NBJ7 301 aa10.38□□□□□ -0.75
COPB1-208ENST00000532088 ZNRF1Q8ND25 227 aa10.38□□□□□ -0.75
COPB1-208ENST00000532088 WFDC11Q8NEX6 87 aa10.38□□□□□ -0.75
COPB1-208ENST00000532088 PHF21AQ96BD5 680 aa10.38□□□□□ -0.75
COPB1-208ENST00000532088 WDFY2Q96P53 400 aa10.38□□□□□ -0.75
COPB1-208ENST00000532088 DPCDQ9BVM2 203 aaPredicted RBP10.38□□□□□ -0.75
COPB1-208ENST00000532088 SSBP3Q9BWW4 388 aaPredicted RBP10.38□□□□□ -0.75
COPB1-208ENST00000532088 ATG5Q9H1Y0 275 aa10.38□□□□□ -0.75
COPB1-208ENST00000532088 DIABLOQ9NR28 239 aa10.38□□□□□ -0.75
COPB1-208ENST00000532088 SLC25A10Q9UBX3 287 aaPredicted RBP10.38□□□□□ -0.75
COPB1-208ENST00000532088 LPAR3Q9UBY5 353 aa10.38□□□□□ -0.75
COPB1-208ENST00000532088 CLN8Q9UBY8 286 aa10.38□□□□□ -0.75
COPB1-208ENST00000532088 PEX16Q9Y5Y5 336 aa10.38□□□□□ -0.75
COPB1-208ENST00000532088 TACC2O95359 2948 aa10.38□□□□□ -0.75
COPB1-208ENST00000532088 ITPR2Q14571 2701 aa10.37□□□□□ -0.75
COPB1-208ENST00000532088 PPIAL4CA0A0B4J2A2 164 aa10.37□□□□□ -0.75
COPB1-208ENST00000532088 SERPINE3A8MV23 424 aa10.37□□□□□ -0.75
COPB1-208ENST00000532088 H7C1Q1 480 aa10.37□□□□□ -0.75
COPB1-208ENST00000532088 SOCS1O15524 211 aa10.37□□□□□ -0.75
COPB1-208ENST00000532088 XRCC3O43542 346 aa10.37□□□□□ -0.75
COPB1-208ENST00000532088 MNDAP41218 407 aa10.37□□□□□ -0.75
COPB1-208ENST00000532088 OR3A1P47881 315 aa10.37□□□□□ -0.75
COPB1-208ENST00000532088 GNB2P62879 340 aa10.37□□□□□ -0.75
COPB1-208ENST00000532088 SCN1BQ07699 218 aa10.37□□□□□ -0.75
COPB1-208ENST00000532088 CNPY1Q3B7I2 92 aa10.37□□□□□ -0.75
COPB1-208ENST00000532088 PAN3Q58A45 887 aaKnown RBP10.37□□□□□ -0.75
COPB1-208ENST00000532088 ATAD3CQ5T2N8 411 aa10.37□□□□□ -0.75
COPB1-208ENST00000532088 Q6ZTK2 550 aa10.37□□□□□ -0.75
COPB1-208ENST00000532088 BIVMQ86UB2 503 aa10.37□□□□□ -0.75
COPB1-208ENST00000532088 CMTM4Q8IZR5 234 aa10.37□□□□□ -0.75
COPB1-208ENST00000532088 GAPTQ8N292 157 aa10.37□□□□□ -0.75
COPB1-208ENST00000532088 ASCC1Q8N9N2 400 aaKnown RBP10.37□□□□□ -0.75
COPB1-208ENST00000532088 TMEM185AQ8NFB2 350 aa10.37□□□□□ -0.75
COPB1-208ENST00000532088 C8orf46Q8TAG6 207 aa10.37□□□□□ -0.75
COPB1-208ENST00000532088 RAB3CQ96E17 227 aa10.37□□□□□ -0.75
COPB1-208ENST00000532088 RIMS4Q9H426 269 aaPredicted RBP10.37□□□□□ -0.75
COPB1-208ENST00000532088 PTTG2Q9NZH5 202 aa10.37□□□□□ -0.75
COPB1-208ENST00000532088 A0A1B0GW55 424 aa10.36□□□□□ -0.75
COPB1-208ENST00000532088 MFNGO00587 321 aa10.36□□□□□ -0.75
COPB1-208ENST00000532088 HPGDSO60760 199 aa10.36□□□□□ -0.75
COPB1-208ENST00000532088 MELTFP08582 738 aa10.36□□□□□ -0.75
COPB1-208ENST00000532088 DUX4L2P0CJ85 424 aa10.36□□□□□ -0.75
COPB1-208ENST00000532088 DUX4L3P0CJ86 424 aa10.36□□□□□ -0.75
COPB1-208ENST00000532088 DUX4L4P0CJ87 422 aa10.36□□□□□ -0.75
COPB1-208ENST00000532088 DUX4L5P0CJ88 424 aa10.36□□□□□ -0.75
COPB1-208ENST00000532088 DUX4L6P0CJ89 424 aa10.36□□□□□ -0.75
COPB1-208ENST00000532088 DUX4L7P0CJ90 424 aa10.36□□□□□ -0.75
COPB1-208ENST00000532088 HIST1H1DP16402 221 aaKnown RBP10.36□□□□□ -0.75
COPB1-208ENST00000532088 GZMKP49863 264 aa10.36□□□□□ -0.75
COPB1-208ENST00000532088 MEF2CQ06413 473 aaPredicted RBP10.36□□□□□ -0.75
COPB1-208ENST00000532088 GRK1Q15835 563 aa10.36□□□□□ -0.75
COPB1-208ENST00000532088 PNLIPRP3Q17RR3 467 aa10.36□□□□□ -0.75
COPB1-208ENST00000532088 PLAC9Q5JTB6 97 aa10.36□□□□□ -0.75
COPB1-208ENST00000532088 SLC35E4Q6ICL7 350 aa10.36□□□□□ -0.75
COPB1-208ENST00000532088 DUX4L9Q6RFH8 374 aaPredicted RBP10.36□□□□□ -0.75
COPB1-208ENST00000532088 BAIAP2L2Q6UXY1 529 aa10.36□□□□□ -0.75
COPB1-208ENST00000532088 GDPD3Q7L5L3 318 aa10.36□□□□□ -0.75
COPB1-208ENST00000532088 OR4S1Q8NGB4 309 aa10.36□□□□□ -0.75
COPB1-208ENST00000532088 C15orf40Q8WUR7 153 aa10.36□□□□□ -0.75
COPB1-208ENST00000532088 ST8SIA4Q92187 359 aa10.36□□□□□ -0.75
COPB1-208ENST00000532088 DCTN5Q9BTE1 182 aa10.36□□□□□ -0.75
COPB1-208ENST00000532088 PECRQ9BY49 303 aa10.36□□□□□ -0.75
COPB1-208ENST00000532088 C6orf62Q9GZU0 229 aaPredicted RBP10.36□□□□□ -0.75
COPB1-208ENST00000532088 PPA2Q9H2U2 334 aa10.36□□□□□ -0.75
COPB1-208ENST00000532088 MIXL1Q9H2W2 232 aa10.36□□□□□ -0.75
COPB1-208ENST00000532088 NARFLQ9H6Q4 476 aa10.36□□□□□ -0.75
COPB1-208ENST00000532088 PLEKHJ1Q9NW61 149 aa10.36□□□□□ -0.75
COPB1-208ENST00000532088 DUX4Q9UBX2 424 aa10.36□□□□□ -0.75
COPB1-208ENST00000532088 CSMD1Q96PZ7 3565 aa10.36□□□□□ -0.75
COPB1-208ENST00000532088 TRBV6-6A0A0A6YYG2 114 aa10.35□□□□□ -0.75
COPB1-208ENST00000532088 LOC100996750A0A140TA64 210 aa10.35□□□□□ -0.75
COPB1-208ENST00000532088 KIAA1324LA8MWY0 1029 aaPredicted RBP10.35□□□□□ -0.75
COPB1-208ENST00000532088 B4DSR2 109 aa10.35□□□□□ -0.75
COPB1-208ENST00000532088 CTDSP2O14595 271 aa10.35□□□□□ -0.75
COPB1-208ENST00000532088 RGS5O15539 181 aa10.35□□□□□ -0.75
COPB1-208ENST00000532088 FCN3O75636 299 aa10.35□□□□□ -0.75
COPB1-208ENST00000532088 CLPXO76031 633 aa10.35□□□□□ -0.75
COPB1-208ENST00000532088 EIF4EP06730 217 aaKnown RBP10.35□□□□□ -0.75
COPB1-208ENST00000532088 LIPFP07098 398 aa10.35□□□□□ -0.75
COPB1-208ENST00000532088 SELLP14151 372 aa10.35□□□□□ -0.75
COPB1-208ENST00000532088 ELK1P19419 428 aa10.35□□□□□ -0.75
COPB1-208ENST00000532088 CDK2P24941 298 aa10.35□□□□□ -0.75
COPB1-208ENST00000532088 S100A5P33763 92 aa10.35□□□□□ -0.75
COPB1-208ENST00000532088 TALDO1P37837 337 aa10.35□□□□□ -0.75
COPB1-208ENST00000532088 P2RX3P56373 397 aa10.35□□□□□ -0.75
COPB1-208ENST00000532088 PITPNAQ00169 270 aa10.35□□□□□ -0.75
COPB1-208ENST00000532088 PDCD1Q15116 288 aa10.35□□□□□ -0.75
COPB1-208ENST00000532088 MOGAT2Q3SYC2 334 aa10.35□□□□□ -0.75
COPB1-208ENST00000532088 ZNF260Q3ZCT1 412 aa10.35□□□□□ -0.75
COPB1-208ENST00000532088 RSBN1Q5VWQ0 802 aaPredicted RBP10.35□□□□□ -0.75
COPB1-208ENST00000532088 ZNF497Q6ZNH5 498 aa10.35□□□□□ -0.75
COPB1-208ENST00000532088 C6orf201Q7Z4U5 140 aa10.35□□□□□ -0.75
COPB1-208ENST00000532088 ARHGAP5-AS1Q96IT6 56 aa10.35□□□□□ -0.75
COPB1-208ENST00000532088 COX4I2Q96KJ9 171 aa10.35□□□□□ -0.75
COPB1-208ENST00000532088 KRTAP4-6Q9BYQ5 205 aa10.35□□□□□ -0.75
COPB1-208ENST00000532088 ETAA1Q9NY74 926 aa10.35□□□□□ -0.75
COPB1-208ENST00000532088 ZNF581Q9P0T4 197 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms