RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 OR11H2Q8NH07 326 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 SGMS2Q8NHU3 365 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 ZNF707Q96C28 371 aaPredicted RBP6.44□□□□□ -1.38
CTNND1-229ENST00000531014 APOOQ9BUR5 198 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 NRSN2Q9GZP1 204 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 C12orf49Q9H741 205 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 SLC17A5Q9NRA2 495 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 WSB2Q9NYS7 404 aaPredicted RBP6.44□□□□□ -1.38
CTNND1-229ENST00000531014 IL36GQ9NZH8 169 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 IL17CQ9P0M4 197 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 TCRBV16S1A1N1A0A5B0 115 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 FCGR3BO75015 233 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 ZNF250P15622 560 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 FUT6P51993 359 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 GAGE2BQ13066 116 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 GAGE2EQ4V326 116 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 ZNF562Q6V9R5 426 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 C16orf82Q7Z2V1 217 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 MARCH3Q86UD3 253 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 LINC00518Q8N0U6 118 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 LSM10Q969L4 123 aaKnown RBP6.44□□□□□ -1.38
CTNND1-229ENST00000531014 DERL3Q96Q80 235 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 FGF21Q9NSA1 209 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 OR5AC2Q9NZP5 309 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 GAGE2DQ9UEU5 116 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 C3orf85A0A1B0GTC6 90 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 LINC00862A6NCI5 91 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 HTN1P15515 57 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 ZNF415Q09FC8 603 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 MPV17LQ2QL34 196 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 FAM209AQ5JX71 171 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 PAPPA-AS1Q5QFB9 102 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 CGB2Q6NT52 195 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 MUC20Q8N307 709 aaPredicted RBP6.43□□□□□ -1.38
CTNND1-229ENST00000531014 OR5R1Q8NH85 324 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 SSBP4Q9BWG4 385 aaPredicted RBP6.43□□□□□ -1.38
CTNND1-229ENST00000531014 PBOV1Q9GZY1 135 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 RAB1BQ9H0U4 201 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 PARLQ9H300 379 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 USP22Q9UPT9 525 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 C9orf170A2RU37 121 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 CXorf65A6NEN9 183 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 PRKRAO75569 313 aaKnown RBP6.43□□□□□ -1.38
CTNND1-229ENST00000531014 SKP2Q13309 424 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 PPP1R1AQ13522 171 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 TP53INP2Q8IXH6 220 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 MRPL30Q8TCC3 161 aaKnown RBP6.43□□□□□ -1.38
CTNND1-229ENST00000531014 SIGLEC11Q96RL6 698 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 HINT3Q9NQE9 182 aaKnown RBP6.43□□□□□ -1.38
CTNND1-229ENST00000531014 SPANXA1Q9NS26 97 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 PLEKHB1Q9UF11 243 aaPredicted RBP6.43□□□□□ -1.38
CTNND1-229ENST00000531014 MSRB2Q9Y3D2 182 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 TRBV23-1A0A0A0MS06 115 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 HYAL3O43820 417 aaPredicted RBP6.43□□□□□ -1.38
CTNND1-229ENST00000531014 PAGE4O60829 102 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 CKS2P33552 79 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 CTAG1AP78358 180 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 DCDP81605 110 aaKnown RBP6.43□□□□□ -1.38
CTNND1-229ENST00000531014 PRDX1Q06830 199 aaKnown RBP6.43□□□□□ -1.38
CTNND1-229ENST00000531014 LRRC10Q5BKY1 277 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 ZFAND6Q6FIF0 208 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 JMJD6Q6NYC1 403 aaPredicted RBP6.43□□□□□ -1.38
CTNND1-229ENST00000531014 MRPL52Q86TS9 123 aaKnown RBP6.43□□□□□ -1.38
CTNND1-229ENST00000531014 PELI3Q8N2H9 469 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 MRGPRDQ8TDS7 321 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 RND1Q92730 232 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 PTP4A1Q93096 173 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 UBE2FQ969M7 185 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 YIPF6Q96EC8 236 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 DPH3Q96FX2 82 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 ZC3HAV1LQ96H79 300 aaKnown RBP6.43□□□□□ -1.38
CTNND1-229ENST00000531014 SCNM1Q9BWG6 230 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 PARP11Q9NR21 331 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 CES1P1Q9UKY3 287 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 PRDX2P32119 198 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 DYNLT3P51808 116 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 ZNF273Q14593 569 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 FAM53AQ6NSI3 398 aaPredicted RBP6.43□□□□□ -1.38
CTNND1-229ENST00000531014 PARS2Q7L3T8 475 aaKnown RBP6.43□□□□□ -1.38
CTNND1-229ENST00000531014 LDLRAD3Q86YD5 345 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 OR2K2Q8NGT1 345 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 CYSLTR2Q9NS75 346 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 ELF5Q9UKW6 265 aaPredicted RBP6.43□□□□□ -1.38
CTNND1-229ENST00000531014 TAF1P21675 1872 aa6.43□□□□□ -1.38
CTNND1-229ENST00000531014 M0R082 166 aa6.42□□□□□ -1.38
CTNND1-229ENST00000531014 ATXN7O15265 892 aaPredicted RBP6.42□□□□□ -1.38
CTNND1-229ENST00000531014 NDUFB3O43676 98 aa6.42□□□□□ -1.38
CTNND1-229ENST00000531014 CXorf1O96002 111 aa6.42□□□□□ -1.38
CTNND1-229ENST00000531014 TRGC1P0CF51 173 aa6.42□□□□□ -1.38
CTNND1-229ENST00000531014 CCL11P51671 97 aa6.42□□□□□ -1.38
CTNND1-229ENST00000531014 INSM1Q01101 510 aaPredicted RBP6.42□□□□□ -1.38
CTNND1-229ENST00000531014 GUCA2AQ02747 115 aa6.42□□□□□ -1.38
CTNND1-229ENST00000531014 ERV3-1Q14264 604 aa6.42□□□□□ -1.38
CTNND1-229ENST00000531014 KCNAB1Q14722 419 aa6.42□□□□□ -1.38
CTNND1-229ENST00000531014 LRRC75BQ2VPJ9 315 aa6.42□□□□□ -1.38
CTNND1-229ENST00000531014 Q8IYB0 196 aa6.42□□□□□ -1.38
CTNND1-229ENST00000531014 ARIH2OSQ8N7S6 290 aa6.42□□□□□ -1.38
CTNND1-229ENST00000531014 OR1K1Q8NGR3 316 aa6.42□□□□□ -1.38
CTNND1-229ENST00000531014 PFN4Q8NHR9 129 aa6.42□□□□□ -1.38
CTNND1-229ENST00000531014 FBXO17Q96EF6 278 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms