RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 ZNF806P0C7X5 589 aa14.73□□□□□ -0.05
BRCA2-204ENST00000530893 ARHGDIBP52566 201 aa14.73□□□□□ -0.05
BRCA2-204ENST00000530893 C3AR1Q16581 482 aa14.73□□□□□ -0.05
BRCA2-204ENST00000530893 BATF2Q8N1L9 274 aa14.73□□□□□ -0.05
BRCA2-204ENST00000530893 OR52M1Q8NGK5 317 aa14.73□□□□□ -0.05
BRCA2-204ENST00000530893 SLC22A20A6NK97 555 aa14.72□□□□□ -0.05
BRCA2-204ENST00000530893 FBXO24O75426 580 aa14.72□□□□□ -0.05
BRCA2-204ENST00000530893 PRKACAP17612 351 aa14.72□□□□□ -0.05
BRCA2-204ENST00000530893 WNT5AP41221 380 aa14.72□□□□□ -0.05
BRCA2-204ENST00000530893 SRSF3P84103 164 aaKnown RBP14.72□□□□□ -0.05
BRCA2-204ENST00000530893 FAM122CQ6P4D5 195 aa14.72□□□□□ -0.05
BRCA2-204ENST00000530893 HAGHLQ6PII5 290 aaPredicted RBP14.72□□□□□ -0.05
BRCA2-204ENST00000530893 TBC1D26Q86UD7 250 aa14.72□□□□□ -0.05
BRCA2-204ENST00000530893 NEK7Q8TDX7 302 aa14.72□□□□□ -0.05
BRCA2-204ENST00000530893 ERGIC1Q969X5 290 aa14.72□□□□□ -0.05
BRCA2-204ENST00000530893 NRIP2Q9BQI9 281 aa14.72□□□□□ -0.05
BRCA2-204ENST00000530893 GINS3Q9BRX5 216 aa14.72□□□□□ -0.05
BRCA2-204ENST00000530893 UBE2J1Q9Y385 318 aaPredicted RBP14.72□□□□□ -0.05
BRCA2-204ENST00000530893 LIPGQ9Y5X9 500 aa14.72□□□□□ -0.05
BRCA2-204ENST00000530893 ZNF407Q9C0G0 2248 aa14.72□□□□□ -0.05
BRCA2-204ENST00000530893 DNAJC13O75165 2243 aa14.72□□□□□ -0.05
BRCA2-204ENST00000530893 MED13Q9UHV7 2174 aa14.72□□□□□ -0.05
BRCA2-204ENST00000530893 FAM74A7A6NL05 159 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 SYNGR1O43759 233 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 SLC34A2O95436 690 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 SCTP09683 121 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 RAB5CP51148 216 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 FAM74A3Q4VXF1 159 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 HIKESHIQ53FT3 197 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 MEX3BQ6ZN04 569 aaKnown RBP14.71□□□□□ -0.05
BRCA2-204ENST00000530893 ZNF695Q8IW36 515 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 COMMD1Q8N668 190 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 SMIM3Q9BZL3 60 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 TLNRD1Q9H1K6 362 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 ZDHHC11Q9H8X9 412 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 LHX6Q9UPM6 363 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 CLEC18AA5D8T8 446 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 CD5P06127 495 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 GLI4P10075 376 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 CTRB1P17538 263 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 PVALBP20472 110 aaPredicted RBP14.71□□□□□ -0.05
BRCA2-204ENST00000530893 CD82P27701 267 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 ARG2P78540 354 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 HERPUD1Q15011 391 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 GUCA2BQ16661 112 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 ZNF766Q5HY98 468 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 SPIN3Q5JUX0 258 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 CTRB2Q6GPI1 263 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 CMTM1Q8IZ96 169 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 FAM58AQ8N1B3 248 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 SUMF2Q8NBJ7 301 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 CLEC18CQ8NCF0 446 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 DMBX1Q8NFW5 382 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 SECTM1Q8WVN6 248 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 IL22RA2Q969J5 263 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 HS3ST6Q96QI5 342 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 C12orf49Q9H741 205 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 GLRX2Q9NS18 164 aa14.71□□□□□ -0.05
BRCA2-204ENST00000530893 WDFY4Q6ZS81 3184 aa14.71□□□□□ -0.06
BRCA2-204ENST00000530893 RNASEK-C17orf49H0YIS7 233 aa14.7□□□□□ -0.06
BRCA2-204ENST00000530893 H2AFB1P0C5Y9 115 aa14.7□□□□□ -0.06
BRCA2-204ENST00000530893 SPP1P10451 314 aa14.7□□□□□ -0.06
BRCA2-204ENST00000530893 MUC1P15941 1255 aaPredicted RBP14.7□□□□□ -0.06
BRCA2-204ENST00000530893 MRPL49Q13405 166 aaKnown RBP14.7□□□□□ -0.06
BRCA2-204ENST00000530893 TBC1D28Q2M2D7 210 aa14.7□□□□□ -0.06
BRCA2-204ENST00000530893 ZNF818PQ6ZRF7 136 aa14.7□□□□□ -0.06
BRCA2-204ENST00000530893 Q6ZRG5 221 aa14.7□□□□□ -0.06
BRCA2-204ENST00000530893 MRPL30Q8TCC3 161 aaKnown RBP14.7□□□□□ -0.06
BRCA2-204ENST00000530893 GMPPAQ96IJ6 420 aaPredicted RBP14.7□□□□□ -0.06
BRCA2-204ENST00000530893 DEFB127Q9H1M4 99 aa14.7□□□□□ -0.06
BRCA2-204ENST00000530893 OR51I2Q9H344 312 aa14.7□□□□□ -0.06
BRCA2-204ENST00000530893 IL36RNQ9UBH0 155 aa14.7□□□□□ -0.06
BRCA2-204ENST00000530893 KNTC1P50748 2209 aa14.7□□□□□ -0.06
BRCA2-204ENST00000530893 DANCRP0C864 163 aa14.7□□□□□ -0.06
BRCA2-204ENST00000530893 UCP1P25874 307 aa14.7□□□□□ -0.06
BRCA2-204ENST00000530893 S100GP29377 79 aa14.7□□□□□ -0.06
BRCA2-204ENST00000530893 DVL1P1P54792 670 aaPredicted RBP14.7□□□□□ -0.06
BRCA2-204ENST00000530893 TSC22D1Q15714 1073 aa14.7□□□□□ -0.06
BRCA2-204ENST00000530893 ZNF880Q6PDB4 577 aa14.7□□□□□ -0.06
BRCA2-204ENST00000530893 MDP1Q86V88 176 aa14.7□□□□□ -0.06
BRCA2-204ENST00000530893 GAPTQ8N292 157 aa14.7□□□□□ -0.06
BRCA2-204ENST00000530893 USB1Q9BQ65 265 aaKnown RBP14.7□□□□□ -0.06
BRCA2-204ENST00000530893 TREM2Q9NZC2 230 aa14.7□□□□□ -0.06
BRCA2-204ENST00000530893 SPRR3Q9UBC9 169 aa14.7□□□□□ -0.06
BRCA2-204ENST00000530893 ZDHHC8Q9ULC8 765 aa14.7□□□□□ -0.06
BRCA2-204ENST00000530893 RCL1Q9Y2P8 373 aaKnown RBP14.7□□□□□ -0.06
BRCA2-204ENST00000530893 J3QT63 122 aa14.69□□□□□ -0.06
BRCA2-204ENST00000530893 NKX2-1P43699 371 aaPredicted RBP14.69□□□□□ -0.06
BRCA2-204ENST00000530893 DHRS7BQ6IAN0 325 aaPredicted RBP14.69□□□□□ -0.06
BRCA2-204ENST00000530893 Q8IYB0 196 aa14.69□□□□□ -0.06
BRCA2-204ENST00000530893 SELENOHQ8IZQ5 122 aaKnown RBP14.69□□□□□ -0.06
BRCA2-204ENST00000530893 BOD1Q96IK1 185 aa14.69□□□□□ -0.06
BRCA2-204ENST00000530893 C11orf1Q9H5F2 150 aa14.69□□□□□ -0.06
BRCA2-204ENST00000530893 PLA2G2EQ9NZK7 142 aa14.69□□□□□ -0.06
BRCA2-204ENST00000530893 LUZP4Q9P127 313 aa14.69□□□□□ -0.06
BRCA2-204ENST00000530893 ARGFXA6NJG6 315 aa14.68□□□□□ -0.06
BRCA2-204ENST00000530893 H0Y980 276 aa14.68□□□□□ -0.06
BRCA2-204ENST00000530893 MMP9P14780 707 aa14.68□□□□□ -0.06
BRCA2-204ENST00000530893 VDAC1P21796 283 aa14.68□□□□□ -0.06
BRCA2-204ENST00000530893 MDH2P40926 338 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms