RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 CD300CQ08708 224 aa12.1□□□□□ -0.47
TTC39A-216ENST00000530004 SMIM21Q3B7S5 101 aa12.1□□□□□ -0.47
TTC39A-216ENST00000530004 PAN3Q58A45 887 aaKnown RBP12.1□□□□□ -0.47
TTC39A-216ENST00000530004 Q6ZPA2 131 aa12.1□□□□□ -0.47
TTC39A-216ENST00000530004 AKAP14Q86UN6 197 aa12.1□□□□□ -0.47
TTC39A-216ENST00000530004 ARRDC1Q8N5I2 433 aa12.1□□□□□ -0.47
TTC39A-216ENST00000530004 OR10Z1Q8NGY1 313 aa12.1□□□□□ -0.47
TTC39A-216ENST00000530004 DACT3Q96B18 629 aaPredicted RBP12.1□□□□□ -0.47
TTC39A-216ENST00000530004 PPP1R14BQ96C90 147 aa12.1□□□□□ -0.47
TTC39A-216ENST00000530004 CCL19Q99731 98 aa12.1□□□□□ -0.47
TTC39A-216ENST00000530004 PPA2Q9H2U2 334 aa12.1□□□□□ -0.47
TTC39A-216ENST00000530004 ZNF286AQ9HBT8 521 aa12.1□□□□□ -0.47
TTC39A-216ENST00000530004 EHFQ9NZC4 300 aa12.1□□□□□ -0.47
TTC39A-216ENST00000530004 GLS2Q9UI32 602 aa12.1□□□□□ -0.47
TTC39A-216ENST00000530004 HMX3A6NHT5 357 aa12.09□□□□□ -0.47
TTC39A-216ENST00000530004 SRRM5B3KS81 715 aa12.09□□□□□ -0.47
TTC39A-216ENST00000530004 OVOL3O00110 214 aa12.09□□□□□ -0.47
TTC39A-216ENST00000530004 SDCBPO00560 298 aaPredicted RBP12.09□□□□□ -0.47
TTC39A-216ENST00000530004 PRAF2O60831 178 aa12.09□□□□□ -0.47
TTC39A-216ENST00000530004 NAPSAO96009 420 aa12.09□□□□□ -0.47
TTC39A-216ENST00000530004 KNG1P01042 644 aa12.09□□□□□ -0.47
TTC39A-216ENST00000530004 EGR1P18146 543 aa12.09□□□□□ -0.47
TTC39A-216ENST00000530004 CEBPDP49716 269 aaPredicted RBP12.09□□□□□ -0.47
TTC39A-216ENST00000530004 MECP2P51608 486 aaKnown RBP12.09□□□□□ -0.47
TTC39A-216ENST00000530004 TSPAN5P62079 268 aa12.09□□□□□ -0.47
TTC39A-216ENST00000530004 CBX3Q13185 183 aa12.09□□□□□ -0.47
TTC39A-216ENST00000530004 OVCH2Q7RTZ1 564 aa12.09□□□□□ -0.47
TTC39A-216ENST00000530004 HRNRQ86YZ3 2850 aaPredicted RBP12.09□□□□□ -0.47
TTC39A-216ENST00000530004 MRGPRFQ96AM1 343 aa12.09□□□□□ -0.47
TTC39A-216ENST00000530004 DIRC2Q96SL1 478 aa12.09□□□□□ -0.47
TTC39A-216ENST00000530004 VRK1Q99986 396 aaPredicted RBP12.09□□□□□ -0.47
TTC39A-216ENST00000530004 GHITMQ9H3K2 345 aa12.09□□□□□ -0.47
TTC39A-216ENST00000530004 HNRNPCP07910 306 aaKnown RBP eCLIP12.08□□□□□ -0.48
TTC39A-216ENST00000530004 CFHR2P36980 270 aa12.08□□□□□ -0.48
TTC39A-216ENST00000530004 CDKN1AP38936 164 aa12.08□□□□□ -0.48
TTC39A-216ENST00000530004 CDK10Q15131 360 aa12.08□□□□□ -0.48
TTC39A-216ENST00000530004 FAM209AQ5JX71 171 aa12.08□□□□□ -0.48
TTC39A-216ENST00000530004 TMEM17Q86X19 198 aa12.08□□□□□ -0.48
TTC39A-216ENST00000530004 BOLLQ8N9W6 283 aaKnown RBP12.08□□□□□ -0.48
TTC39A-216ENST00000530004 GCM1Q9NP62 436 aa12.08□□□□□ -0.48
TTC39A-216ENST00000530004 RASL12Q9NYN1 266 aa12.08□□□□□ -0.48
TTC39A-216ENST00000530004 DCHS2Q6V1P9 2916 aa12.08□□□□□ -0.48
TTC39A-216ENST00000530004 TMEM82A0PJX8 343 aa12.07□□□□□ -0.48
TTC39A-216ENST00000530004 RFPL4AA6NLU0 287 aa12.07□□□□□ -0.48
TTC39A-216ENST00000530004 OR2AT4A6NND4 320 aa12.07□□□□□ -0.48
TTC39A-216ENST00000530004 RFPL4AL1F8VTS6 287 aa12.07□□□□□ -0.48
TTC39A-216ENST00000530004 CD55P08174 381 aa12.07□□□□□ -0.48
TTC39A-216ENST00000530004 TRAPPC2P0DI81 140 aa12.07□□□□□ -0.48
TTC39A-216ENST00000530004 TRAPPC2BP0DI82 140 aa12.07□□□□□ -0.48
TTC39A-216ENST00000530004 RRAS2P62070 204 aaPredicted RBP12.07□□□□□ -0.48
TTC39A-216ENST00000530004 GCSAMQ8N6F7 178 aa12.07□□□□□ -0.48
TTC39A-216ENST00000530004 TERB2Q8NHR7 220 aa12.07□□□□□ -0.48
TTC39A-216ENST00000530004 OR51J1Q9H342 316 aa12.07□□□□□ -0.48
TTC39A-216ENST00000530004 RIMS4Q9H426 269 aaPredicted RBP12.07□□□□□ -0.48
TTC39A-216ENST00000530004 NECAP2Q9NVZ3 263 aa12.07□□□□□ -0.48
TTC39A-216ENST00000530004 AKAP6Q13023 2319 aa12.07□□□□□ -0.48
TTC39A-216ENST00000530004 HECTD1Q9ULT8 2610 aa12.07□□□□□ -0.48
TTC39A-216ENST00000530004 ARFGEF3Q5TH69 2177 aa12.07□□□□□ -0.48
TTC39A-216ENST00000530004 BOLA2-SMG1P6H3BVE0 249 aa12.07□□□□□ -0.48
TTC39A-216ENST00000530004 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.07□□□□□ -0.48
TTC39A-216ENST00000530004 CCNKO75909 580 aa12.07□□□□□ -0.48
TTC39A-216ENST00000530004 VSIG10L2P0DP72 767 aa12.07□□□□□ -0.48
TTC39A-216ENST00000530004 MDH2P40926 338 aaKnown RBP12.07□□□□□ -0.48
TTC39A-216ENST00000530004 CCL8P80075 99 aa12.07□□□□□ -0.48
TTC39A-216ENST00000530004 GRK1Q15835 563 aa12.07□□□□□ -0.48
TTC39A-216ENST00000530004 ATPAF1Q5TC12 328 aaPredicted RBP12.07□□□□□ -0.48
TTC39A-216ENST00000530004 METTL11BQ5VVY1 283 aa12.07□□□□□ -0.48
TTC39A-216ENST00000530004 SHEQ5VZ18 495 aa12.07□□□□□ -0.48
TTC39A-216ENST00000530004 GLDNQ6ZMI3 551 aaPredicted RBP12.07□□□□□ -0.48
TTC39A-216ENST00000530004 TMED4Q7Z7H5 227 aa12.07□□□□□ -0.48
TTC39A-216ENST00000530004 MRPL30Q8TCC3 161 aaKnown RBP12.07□□□□□ -0.48
TTC39A-216ENST00000530004 ERGIC1Q969X5 290 aa12.07□□□□□ -0.48
TTC39A-216ENST00000530004 SEC22CQ9BRL7 303 aa12.07□□□□□ -0.48
TTC39A-216ENST00000530004 RAB1BQ9H0U4 201 aa12.07□□□□□ -0.48
TTC39A-216ENST00000530004 TMEM165Q9HC07 324 aa12.07□□□□□ -0.48
TTC39A-216ENST00000530004 Q9N2K0 584 aa12.07□□□□□ -0.48
TTC39A-216ENST00000530004 VSIG4Q9Y279 399 aa12.07□□□□□ -0.48
TTC39A-216ENST00000530004 NPTNQ9Y639 398 aa12.07□□□□□ -0.48
TTC39A-216ENST00000530004 FBN2P35556 2912 aa12.07□□□□□ -0.48
TTC39A-216ENST00000530004 DSCAMO60469 2012 aa12.06□□□□□ -0.48
TTC39A-216ENST00000530004 LHBP01229 141 aa12.06□□□□□ -0.48
TTC39A-216ENST00000530004 HPXP02790 462 aa12.06□□□□□ -0.48
TTC39A-216ENST00000530004 TFF1P04155 84 aa12.06□□□□□ -0.48
TTC39A-216ENST00000530004 IL5P05113 134 aa12.06□□□□□ -0.48
TTC39A-216ENST00000530004 TESK1Q15569 626 aa12.06□□□□□ -0.48
TTC39A-216ENST00000530004 SRSF7Q16629 238 aaKnown RBP eCLIP12.06□□□□□ -0.48
TTC39A-216ENST00000530004 Q6ZS49 121 aa12.06□□□□□ -0.48
TTC39A-216ENST00000530004 SLC36A1Q7Z2H8 476 aa12.06□□□□□ -0.48
TTC39A-216ENST00000530004 LHFPL1Q86WI0 220 aa12.06□□□□□ -0.48
TTC39A-216ENST00000530004 FAM90A1Q86YD7 464 aa12.06□□□□□ -0.48
TTC39A-216ENST00000530004 ZDHHC22Q8N966 263 aa12.06□□□□□ -0.48
TTC39A-216ENST00000530004 OR5T2Q8NGG2 359 aa12.06□□□□□ -0.48
TTC39A-216ENST00000530004 MED28Q9H204 178 aa12.06□□□□□ -0.48
TTC39A-216ENST00000530004 DECR2Q9NUI1 292 aa12.06□□□□□ -0.48
TTC39A-216ENST00000530004 ING3Q9NXR8 418 aa12.06□□□□□ -0.48
TTC39A-216ENST00000530004 TREM2Q9NZC2 230 aa12.06□□□□□ -0.48
TTC39A-216ENST00000530004 RNF7Q9UBF6 113 aa12.06□□□□□ -0.48
TTC39A-216ENST00000530004 DNAJB11Q9UBS4 358 aa12.06□□□□□ -0.48
TTC39A-216ENST00000530004 WIPI2Q9Y4P8 454 aa12.06□□□□□ -0.48
TTC39A-216ENST00000530004 CRYBG3Q68DQ2 2970 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms