RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 NCOR1P1Q9H4R4 102 aa13.13□□□□□ -0.31
TSPAN4-218ENST00000529566 PCDHB16Q9NRJ7 776 aa13.13□□□□□ -0.31
TSPAN4-218ENST00000529566 MEIOCA2RUB1 952 aa13.12□□□□□ -0.31
TSPAN4-218ENST00000529566 FUOMA2VDF0 154 aa13.12□□□□□ -0.31
TSPAN4-218ENST00000529566 HSPB6O14558 160 aa13.12□□□□□ -0.31
TSPAN4-218ENST00000529566 IER3P46695 156 aa13.12□□□□□ -0.31
TSPAN4-218ENST00000529566 ATXN7L3Q14CW9 347 aaPredicted RBP13.12□□□□□ -0.31
TSPAN4-218ENST00000529566 PAN3Q58A45 887 aaKnown RBP13.12□□□□□ -0.31
TSPAN4-218ENST00000529566 KRBOX4Q5JUW0 171 aa13.12□□□□□ -0.31
TSPAN4-218ENST00000529566 AWAT2Q6E213 333 aa13.12□□□□□ -0.31
TSPAN4-218ENST00000529566 CD200R1LQ6Q8B3 271 aa13.12□□□□□ -0.31
TSPAN4-218ENST00000529566 LINC00596Q86U02 117 aa13.12□□□□□ -0.31
TSPAN4-218ENST00000529566 TMEM86BQ8N661 226 aa13.12□□□□□ -0.31
TSPAN4-218ENST00000529566 SUMF2Q8NBJ7 301 aa13.12□□□□□ -0.31
TSPAN4-218ENST00000529566 PLPPR1Q8TBJ4 325 aa13.12□□□□□ -0.31
TSPAN4-218ENST00000529566 SLC25A28Q96A46 364 aa13.12□□□□□ -0.31
TSPAN4-218ENST00000529566 MRPS24Q96EL2 167 aaKnown RBP13.12□□□□□ -0.31
TSPAN4-218ENST00000529566 DPCDQ9BVM2 203 aaPredicted RBP13.12□□□□□ -0.31
TSPAN4-218ENST00000529566 NDUFB11Q9NX14 153 aa13.12□□□□□ -0.31
TSPAN4-218ENST00000529566 TMEM89A2RUT3 159 aa13.11□□□□□ -0.31
TSPAN4-218ENST00000529566 FAM90A8PA6NJQ4 464 aa13.11□□□□□ -0.31
TSPAN4-218ENST00000529566 ODF3BA8MYP8 253 aa13.11□□□□□ -0.31
TSPAN4-218ENST00000529566 OR7C1O76099 320 aaPredicted RBP13.11□□□□□ -0.31
TSPAN4-218ENST00000529566 IGHV4-59P01825 116 aa13.11□□□□□ -0.31
TSPAN4-218ENST00000529566 COX7A1P24310 79 aa13.11□□□□□ -0.31
TSPAN4-218ENST00000529566 TAF9Q16594 264 aa13.11□□□□□ -0.31
TSPAN4-218ENST00000529566 MPV17LQ2QL34 196 aa13.11□□□□□ -0.31
TSPAN4-218ENST00000529566 RSBN1Q5VWQ0 802 aaPredicted RBP13.11□□□□□ -0.31
TSPAN4-218ENST00000529566 C16orf87Q6PH81 154 aa13.11□□□□□ -0.31
TSPAN4-218ENST00000529566 SVOPQ8N4V2 548 aa13.11□□□□□ -0.31
TSPAN4-218ENST00000529566 OR11H6Q8NGC7 330 aa13.11□□□□□ -0.31
TSPAN4-218ENST00000529566 SSMEM1Q8WWF3 244 aa13.11□□□□□ -0.31
TSPAN4-218ENST00000529566 FOXRED1Q96CU9 486 aaPredicted RBP13.11□□□□□ -0.31
TSPAN4-218ENST00000529566 BANF2Q9H503 90 aa13.11□□□□□ -0.31
TSPAN4-218ENST00000529566 ING3Q9NXR8 418 aa13.11□□□□□ -0.31
TSPAN4-218ENST00000529566 TAS2R3Q9NYW6 316 aa13.11□□□□□ -0.31
TSPAN4-218ENST00000529566 ZNRD1Q9P1U0 126 aa13.11□□□□□ -0.31
TSPAN4-218ENST00000529566 RCC2Q9P258 522 aaKnown RBP13.11□□□□□ -0.31
TSPAN4-218ENST00000529566 FAM96BQ9Y3D0 163 aa13.11□□□□□ -0.31
TSPAN4-218ENST00000529566 POMT1Q9Y6A1 747 aa13.11□□□□□ -0.31
TSPAN4-218ENST00000529566 TRGV10A0A0A0MS01 117 aa13.1□□□□□ -0.31
TSPAN4-218ENST00000529566 SLC22A1O15245 554 aa13.1□□□□□ -0.31
TSPAN4-218ENST00000529566 FBP1P09467 338 aa13.1□□□□□ -0.31
TSPAN4-218ENST00000529566 MGMTP16455 207 aa13.1□□□□□ -0.31
TSPAN4-218ENST00000529566 GDNFP39905 211 aa13.1□□□□□ -0.31
TSPAN4-218ENST00000529566 KCNJ3P48549 501 aa13.1□□□□□ -0.31
TSPAN4-218ENST00000529566 COMPP49747 757 aaPredicted RBP13.1□□□□□ -0.31
TSPAN4-218ENST00000529566 QRFPP83859 136 aa13.1□□□□□ -0.31
TSPAN4-218ENST00000529566 C17orf58Q2M2W7 97 aa13.1□□□□□ -0.31
TSPAN4-218ENST00000529566 LDLRAD2Q5SZI1 272 aa13.1□□□□□ -0.31
TSPAN4-218ENST00000529566 GLT8D1Q68CQ7 371 aa13.1□□□□□ -0.31
TSPAN4-218ENST00000529566 ZNF773Q6PK81 442 aa13.1□□□□□ -0.31
TSPAN4-218ENST00000529566 BAIAP2L2Q6UXY1 529 aa13.1□□□□□ -0.31
TSPAN4-218ENST00000529566 HEPN1Q6WQI6 88 aa13.1□□□□□ -0.31
TSPAN4-218ENST00000529566 BEND2Q8NDZ0 799 aa13.1□□□□□ -0.31
TSPAN4-218ENST00000529566 Q96M66 194 aa13.1□□□□□ -0.31
TSPAN4-218ENST00000529566 CHIAQ9BZP6 476 aa13.1□□□□□ -0.31
TSPAN4-218ENST00000529566 MEGF9Q9H1U4 602 aa13.1□□□□□ -0.31
TSPAN4-218ENST00000529566 LINC00574Q9H8X3 128 aa13.1□□□□□ -0.31
TSPAN4-218ENST00000529566 GHRLQ9UBU3 117 aa13.1□□□□□ -0.31
TSPAN4-218ENST00000529566 KIF25Q9UIL4 384 aa13.1□□□□□ -0.31
TSPAN4-218ENST00000529566 SESN1Q9Y6P5 492 aa13.1□□□□□ -0.31
TSPAN4-218ENST00000529566 TENM1Q9UKZ4 2725 aa13.1□□□□□ -0.31
TSPAN4-218ENST00000529566 CRTAPO75718 401 aaPredicted RBP13.09□□□□□ -0.31
TSPAN4-218ENST00000529566 ARL6IP5O75915 188 aa13.09□□□□□ -0.31
TSPAN4-218ENST00000529566 CLPXO76031 633 aa13.09□□□□□ -0.31
TSPAN4-218ENST00000529566 VSIG8P0DPA2 414 aa13.09□□□□□ -0.31
TSPAN4-218ENST00000529566 KCTD21Q4G0X4 260 aa13.09□□□□□ -0.31
TSPAN4-218ENST00000529566 PRAMEF5Q5TYX0 476 aa13.09□□□□□ -0.31
TSPAN4-218ENST00000529566 ZNF626Q68DY1 528 aa13.09□□□□□ -0.31
TSPAN4-218ENST00000529566 SIGIRRQ6IA17 410 aa13.09□□□□□ -0.31
TSPAN4-218ENST00000529566 BRICD5Q6PL45 260 aa13.09□□□□□ -0.31
TSPAN4-218ENST00000529566 TRAPPC6BQ86SZ2 158 aa13.09□□□□□ -0.31
TSPAN4-218ENST00000529566 OR13A1Q8NGR1 328 aa13.09□□□□□ -0.31
TSPAN4-218ENST00000529566 OR13D1Q8NGV5 346 aa13.09□□□□□ -0.31
TSPAN4-218ENST00000529566 TAF15Q92804 592 aaKnown RBP eCLIP13.09□□□□□ -0.31
TSPAN4-218ENST00000529566 CYYR1Q96J86 154 aa13.09□□□□□ -0.31
TSPAN4-218ENST00000529566 BARHL1Q9BZE3 327 aa13.09□□□□□ -0.31
TSPAN4-218ENST00000529566 SELENOIQ9C0D9 397 aa13.09□□□□□ -0.31
TSPAN4-218ENST00000529566 TMEM133Q9H2Q1 129 aa13.09□□□□□ -0.31
TSPAN4-218ENST00000529566 OR6C3Q9NZP0 311 aa13.09□□□□□ -0.31
TSPAN4-218ENST00000529566 MEIKINA0A087WXM9 373 aa13.08□□□□□ -0.32
TSPAN4-218ENST00000529566 KBTBD11-OT1A0A1B0GTJ5 212 aa13.08□□□□□ -0.32
TSPAN4-218ENST00000529566 TRDV1A0A1B0GX56 115 aa13.08□□□□□ -0.32
TSPAN4-218ENST00000529566 SHISA3A0PJX4 238 aa13.08□□□□□ -0.32
TSPAN4-218ENST00000529566 FAM90A10PA6NDY2 464 aa13.08□□□□□ -0.32
TSPAN4-218ENST00000529566 FAM90A18PA6NE21 464 aa13.08□□□□□ -0.32
TSPAN4-218ENST00000529566 FAM90A16PA6NEW6 464 aa13.08□□□□□ -0.32
TSPAN4-218ENST00000529566 FAM90A20PA6NIJ5 464 aa13.08□□□□□ -0.32
TSPAN4-218ENST00000529566 FAM90A7PA6NKC0 464 aa13.08□□□□□ -0.32
TSPAN4-218ENST00000529566 FAM90A22PA8MWA6 464 aa13.08□□□□□ -0.32
TSPAN4-218ENST00000529566 FAM90A12PA8MX19 464 aa13.08□□□□□ -0.32
TSPAN4-218ENST00000529566 FAM90A5PA8MXJ8 464 aa13.08□□□□□ -0.32
TSPAN4-218ENST00000529566 FAM90A23PA8MXZ1 464 aa13.08□□□□□ -0.32
TSPAN4-218ENST00000529566 FAM90A15PP0C7V4 464 aa13.08□□□□□ -0.32
TSPAN4-218ENST00000529566 FAM90A13PP0C7W8 464 aa13.08□□□□□ -0.32
TSPAN4-218ENST00000529566 FAM90A14PP0C7W9 464 aa13.08□□□□□ -0.32
TSPAN4-218ENST00000529566 FAM90A24PP0C7X0 464 aa13.08□□□□□ -0.32
TSPAN4-218ENST00000529566 UBBP0CG47 229 aa13.08□□□□□ -0.32
TSPAN4-218ENST00000529566 HKR1P10072 659 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms