RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 RAB2BQ8WUD1 216 aa11.55□□□□□ -0.56
USF1-209ENST00000529476 COQ2Q96H96 371 aa11.55□□□□□ -0.56
USF1-209ENST00000529476 URM1Q9BTM9 101 aaKnown RBP11.55□□□□□ -0.56
USF1-209ENST00000529476 TMPRSS13Q9BYE2 586 aa11.55□□□□□ -0.56
USF1-209ENST00000529476 C7orf69Q9H7B7 122 aa11.55□□□□□ -0.56
USF1-209ENST00000529476 RCC2Q9P258 522 aaKnown RBP11.55□□□□□ -0.56
USF1-209ENST00000529476 RAB22AQ9UL26 194 aa11.55□□□□□ -0.56
USF1-209ENST00000529476 J3QLI3 93 aa11.54□□□□□ -0.56
USF1-209ENST00000529476 CSN2P05814 226 aa11.54□□□□□ -0.56
USF1-209ENST00000529476 FUT3P21217 361 aa11.54□□□□□ -0.56
USF1-209ENST00000529476 GLIPR1P48060 266 aa11.54□□□□□ -0.56
USF1-209ENST00000529476 P2RX3P56373 397 aa11.54□□□□□ -0.56
USF1-209ENST00000529476 PAX8Q06710 450 aa11.54□□□□□ -0.56
USF1-209ENST00000529476 ZNF273Q14593 569 aa11.54□□□□□ -0.56
USF1-209ENST00000529476 SPCS2Q15005 226 aa11.54□□□□□ -0.56
USF1-209ENST00000529476 NKAPLQ5M9Q1 402 aa11.54□□□□□ -0.56
USF1-209ENST00000529476 TMEM200BQ69YZ2 307 aa11.54□□□□□ -0.56
USF1-209ENST00000529476 RAB12Q6IQ22 244 aa11.54□□□□□ -0.56
USF1-209ENST00000529476 USP43Q70EL4 1123 aa11.54□□□□□ -0.56
USF1-209ENST00000529476 TCF23Q7RTU1 214 aa11.54□□□□□ -0.56
USF1-209ENST00000529476 RTN4RL2Q86UN3 420 aa11.54□□□□□ -0.56
USF1-209ENST00000529476 PLPPR1Q8TBJ4 325 aa11.54□□□□□ -0.56
USF1-209ENST00000529476 SLC25A46Q96AG3 418 aa11.54□□□□□ -0.56
USF1-209ENST00000529476 MRI1Q9BV20 369 aa11.54□□□□□ -0.56
USF1-209ENST00000529476 BARHL1Q9BZE3 327 aa11.54□□□□□ -0.56
USF1-209ENST00000529476 DCSTAMPQ9H295 470 aa11.54□□□□□ -0.56
USF1-209ENST00000529476 SPACA1Q9HBV2 294 aa11.54□□□□□ -0.56
USF1-209ENST00000529476 ONECUT1Q9UBC0 465 aa11.54□□□□□ -0.56
USF1-209ENST00000529476 OPN4Q9UHM6 478 aa11.54□□□□□ -0.56
USF1-209ENST00000529476 PEX16Q9Y5Y5 336 aa11.54□□□□□ -0.56
USF1-209ENST00000529476 CEPT1Q9Y6K0 416 aa11.54□□□□□ -0.56
USF1-209ENST00000529476 SONP18583 2426 aaKnown RBP11.54□□□□□ -0.56
USF1-209ENST00000529476 HIVEP2P31629 2446 aa11.53□□□□□ -0.56
USF1-209ENST00000529476 SOCS1O15524 211 aa11.53□□□□□ -0.56
USF1-209ENST00000529476 PDCD6O75340 191 aa11.53□□□□□ -0.56
USF1-209ENST00000529476 LIPFP07098 398 aa11.53□□□□□ -0.56
USF1-209ENST00000529476 CCL3L1P16619 93 aa11.53□□□□□ -0.56
USF1-209ENST00000529476 RAB6AP20340 208 aa11.53□□□□□ -0.56
USF1-209ENST00000529476 CHATP28329 748 aa11.53□□□□□ -0.56
USF1-209ENST00000529476 ERP29P30040 261 aaKnown RBP11.53□□□□□ -0.56
USF1-209ENST00000529476 BLVRBP30043 206 aaPredicted RBP11.53□□□□□ -0.56
USF1-209ENST00000529476 VEGFCP49767 419 aa11.53□□□□□ -0.56
USF1-209ENST00000529476 ARF6P62330 175 aa11.53□□□□□ -0.56
USF1-209ENST00000529476 KRBOX4Q5JUW0 171 aa11.53□□□□□ -0.56
USF1-209ENST00000529476 FAM120AOSQ5T036 256 aa11.53□□□□□ -0.56
USF1-209ENST00000529476 RSBN1Q5VWQ0 802 aaPredicted RBP11.53□□□□□ -0.56
USF1-209ENST00000529476 C1orf229Q6ZS94 237 aaPredicted RBP11.53□□□□□ -0.56
USF1-209ENST00000529476 IL17RELQ6ZVW7 336 aa11.53□□□□□ -0.56
USF1-209ENST00000529476 CROCCP3Q8IVE0 287 aa11.53□□□□□ -0.56
USF1-209ENST00000529476 FAM89BQ8N5H3 189 aa11.53□□□□□ -0.56
USF1-209ENST00000529476 OR5H6Q8NGV6 325 aa11.53□□□□□ -0.56
USF1-209ENST00000529476 NEK7Q8TDX7 302 aa11.53□□□□□ -0.56
USF1-209ENST00000529476 ISOC1Q96CN7 298 aa11.53□□□□□ -0.56
USF1-209ENST00000529476 NEDD4LQ96PU5 975 aa11.53□□□□□ -0.56
USF1-209ENST00000529476 AUP1Q9Y679 476 aa11.53□□□□□ -0.56
USF1-209ENST00000529476 KIAA2026Q5HYC2 2103 aa11.53□□□□□ -0.56
USF1-209ENST00000529476 ODAMA1E959 279 aa11.52□□□□□ -0.57
USF1-209ENST00000529476 UBE2QL1A1L167 161 aa11.52□□□□□ -0.57
USF1-209ENST00000529476 FOXI3A8MTJ6 420 aaPredicted RBP11.52□□□□□ -0.57
USF1-209ENST00000529476 MCRIP1C9JLW8 97 aa11.52□□□□□ -0.57
USF1-209ENST00000529476 H3BMQ9 156 aa11.52□□□□□ -0.57
USF1-209ENST00000529476 NOL3O60936 208 aaKnown RBP11.52□□□□□ -0.57
USF1-209ENST00000529476 KCNJ3P48549 501 aa11.52□□□□□ -0.57
USF1-209ENST00000529476 MEF2CQ06413 473 aaPredicted RBP11.52□□□□□ -0.57
USF1-209ENST00000529476 BLMHQ13867 455 aa11.52□□□□□ -0.57
USF1-209ENST00000529476 MOGAT2Q3SYC2 334 aa11.52□□□□□ -0.57
USF1-209ENST00000529476 C6orf201Q7Z4U5 140 aa11.52□□□□□ -0.57
USF1-209ENST00000529476 OR56B1Q8NGI3 324 aa11.52□□□□□ -0.57
USF1-209ENST00000529476 DYRK2Q92630 601 aa11.52□□□□□ -0.57
USF1-209ENST00000529476 PTX4Q96A99 478 aa11.52□□□□□ -0.57
USF1-209ENST00000529476 WDFY2Q96P53 400 aa11.52□□□□□ -0.57
USF1-209ENST00000529476 BCL7BQ9BQE9 202 aa11.52□□□□□ -0.57
USF1-209ENST00000529476 SULT4A1Q9BR01 284 aa11.52□□□□□ -0.57
USF1-209ENST00000529476 SIRPDQ9H106 197 aa11.52□□□□□ -0.57
USF1-209ENST00000529476 TMEM160Q9NX00 188 aa11.52□□□□□ -0.57
USF1-209ENST00000529476 KIF25Q9UIL4 384 aa11.52□□□□□ -0.57
USF1-209ENST00000529476 hADV38S2A0JD32 116 aa11.51□□□□□ -0.57
USF1-209ENST00000529476 FUOMA2VDF0 154 aa11.51□□□□□ -0.57
USF1-209ENST00000529476 CCDC160A6NGH7 325 aa11.51□□□□□ -0.57
USF1-209ENST00000529476 RNF212BA8MTL3 300 aa11.51□□□□□ -0.57
USF1-209ENST00000529476 H3BUI4 141 aa11.51□□□□□ -0.57
USF1-209ENST00000529476 TMEM127O75204 238 aa11.51□□□□□ -0.57
USF1-209ENST00000529476 GLAP06280 429 aa11.51□□□□□ -0.57
USF1-209ENST00000529476 MMP9P14780 707 aa11.51□□□□□ -0.57
USF1-209ENST00000529476 RORCP51449 518 aa11.51□□□□□ -0.57
USF1-209ENST00000529476 DLX1P56177 255 aa11.51□□□□□ -0.57
USF1-209ENST00000529476 TMEM50BP56557 158 aa11.51□□□□□ -0.57
USF1-209ENST00000529476 SCAND1P57086 179 aa11.51□□□□□ -0.57
USF1-209ENST00000529476 RBM39Q14498 530 aaKnown RBP11.51□□□□□ -0.57
USF1-209ENST00000529476 METTL11BQ5VVY1 283 aa11.51□□□□□ -0.57
USF1-209ENST00000529476 SLC35E4Q6ICL7 350 aa11.51□□□□□ -0.57
USF1-209ENST00000529476 CMTM4Q8IZR5 234 aa11.51□□□□□ -0.57
USF1-209ENST00000529476 KIR3DL3Q8N743 410 aa11.51□□□□□ -0.57
USF1-209ENST00000529476 Q8N7P7 452 aa11.51□□□□□ -0.57
USF1-209ENST00000529476 SLC25A38Q96DW6 304 aa11.51□□□□□ -0.57
USF1-209ENST00000529476 DMRTB1Q96MA1 342 aa11.51□□□□□ -0.57
USF1-209ENST00000529476 TBX15Q96SF7 602 aa11.51□□□□□ -0.57
USF1-209ENST00000529476 PCGF1Q9BSM1 259 aa11.51□□□□□ -0.57
USF1-209ENST00000529476 FAAP24Q9BTP7 215 aa11.51□□□□□ -0.57
USF1-209ENST00000529476 RBM38Q9H0Z9 239 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms