RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 STARD10Q9Y365 291 aa10.07□□□□□ -0.8
USF1-208ENST00000528768 AUP1Q9Y679 476 aa10.07□□□□□ -0.8
USF1-208ENST00000528768 ZNF469Q96JG9 3925 aaPredicted RBP10.07□□□□□ -0.8
USF1-208ENST00000528768 IGKV1-12A0A0C4DH73 117 aa10.06□□□□□ -0.8
USF1-208ENST00000528768 POM121CA8CG34 1229 aa10.06□□□□□ -0.8
USF1-208ENST00000528768 LEUTXA8MZ59 168 aa10.06□□□□□ -0.8
USF1-208ENST00000528768 ZNF732B4DXR9 585 aa10.06□□□□□ -0.8
USF1-208ENST00000528768 CCSO14618 274 aa10.06□□□□□ -0.8
USF1-208ENST00000528768 GEMIN2O14893 280 aaKnown RBP10.06□□□□□ -0.8
USF1-208ENST00000528768 OR7C1O76099 320 aaPredicted RBP10.06□□□□□ -0.8
USF1-208ENST00000528768 DIRAS3O95661 229 aa10.06□□□□□ -0.8
USF1-208ENST00000528768 IGKV1D-12P01611 117 aa10.06□□□□□ -0.8
USF1-208ENST00000528768 RLN2P04090 185 aa10.06□□□□□ -0.8
USF1-208ENST00000528768 CRHP06850 196 aa10.06□□□□□ -0.8
USF1-208ENST00000528768 HOXD4P09016 255 aaPredicted RBP10.06□□□□□ -0.8
USF1-208ENST00000528768 CTXN2P0C2S0 81 aa10.06□□□□□ -0.8
USF1-208ENST00000528768 TUBG1P23258 451 aa10.06□□□□□ -0.8
USF1-208ENST00000528768 CHRNB4P30926 498 aa10.06□□□□□ -0.8
USF1-208ENST00000528768 HAAOP46952 286 aa10.06□□□□□ -0.8
USF1-208ENST00000528768 UCP3P55916 312 aa10.06□□□□□ -0.8
USF1-208ENST00000528768 GNG3P63215 75 aa10.06□□□□□ -0.8
USF1-208ENST00000528768 RBM39Q14498 530 aaKnown RBP10.06□□□□□ -0.8
USF1-208ENST00000528768 AADACL3Q5VUY0 350 aa10.06□□□□□ -0.8
USF1-208ENST00000528768 TFAP2EQ6VUC0 442 aa10.06□□□□□ -0.8
USF1-208ENST00000528768 FAM214BQ7L5A3 538 aa10.06□□□□□ -0.8
USF1-208ENST00000528768 RTN4RL2Q86UN3 420 aa10.06□□□□□ -0.8
USF1-208ENST00000528768 DOLPP1Q86YN1 238 aa10.06□□□□□ -0.8
USF1-208ENST00000528768 FAM185AQ8N0U4 392 aa10.06□□□□□ -0.8
USF1-208ENST00000528768 OR10AD1Q8NGE0 317 aa10.06□□□□□ -0.8
USF1-208ENST00000528768 LRRC20Q8TCA0 184 aa10.06□□□□□ -0.8
USF1-208ENST00000528768 MAFIPQ8WZ33 124 aa10.06□□□□□ -0.8
USF1-208ENST00000528768 WNT2BQ93097 391 aa10.06□□□□□ -0.8
USF1-208ENST00000528768 TRIB1Q96RU8 372 aa10.06□□□□□ -0.8
USF1-208ENST00000528768 SULT4A1Q9BR01 284 aa10.06□□□□□ -0.8
USF1-208ENST00000528768 RTL8AQ9BWD3 113 aa10.06□□□□□ -0.8
USF1-208ENST00000528768 PKIBQ9C010 78 aa10.06□□□□□ -0.8
USF1-208ENST00000528768 SLC25A32Q9H2D1 315 aa10.06□□□□□ -0.8
USF1-208ENST00000528768 KCNJ16Q9NPI9 418 aa10.06□□□□□ -0.8
USF1-208ENST00000528768 TUBG2Q9NRH3 451 aa10.06□□□□□ -0.8
USF1-208ENST00000528768 DECR2Q9NUI1 292 aa10.06□□□□□ -0.8
USF1-208ENST00000528768 FBXO9Q9UK97 447 aaPredicted RBP10.06□□□□□ -0.8
USF1-208ENST00000528768 KIR2DS1A0A191URI9 304 aa10.05□□□□□ -0.8
USF1-208ENST00000528768 RPS10-NUDT3A0A1W2PQS6 291 aa10.05□□□□□ -0.8
USF1-208ENST00000528768 AHRRA9YTQ3 701 aa10.05□□□□□ -0.8
USF1-208ENST00000528768 CFDP00746 253 aaPredicted RBP10.05□□□□□ -0.8
USF1-208ENST00000528768 KNG1P01042 644 aa10.05□□□□□ -0.8
USF1-208ENST00000528768 SFTPBP07988 381 aa10.05□□□□□ -0.8
USF1-208ENST00000528768 RRASP10301 218 aa10.05□□□□□ -0.8
USF1-208ENST00000528768 GLRA1P23415 457 aa10.05□□□□□ -0.8
USF1-208ENST00000528768 KIR2DS4P43632 304 aa10.05□□□□□ -0.8
USF1-208ENST00000528768 GPM6AP51674 278 aa10.05□□□□□ -0.8
USF1-208ENST00000528768 IL13RA2Q14627 380 aa10.05□□□□□ -0.8
USF1-208ENST00000528768 KIR2DS1Q14954 304 aa10.05□□□□□ -0.8
USF1-208ENST00000528768 PIGYQ3MUY2 71 aa10.05□□□□□ -0.8
USF1-208ENST00000528768 LRRC37A5PQ49AS3 106 aa10.05□□□□□ -0.8
USF1-208ENST00000528768 SIGIRRQ6IA17 410 aa10.05□□□□□ -0.8
USF1-208ENST00000528768 SLC22A25Q6T423 547 aa10.05□□□□□ -0.8
USF1-208ENST00000528768 Q6ZS49 121 aa10.05□□□□□ -0.8
USF1-208ENST00000528768 MDP1Q86V88 176 aa10.05□□□□□ -0.8
USF1-208ENST00000528768 Q8IYB0 196 aa10.05□□□□□ -0.8
USF1-208ENST00000528768 SLC38A6Q8IZM9 456 aa10.05□□□□□ -0.8
USF1-208ENST00000528768 NAXEQ8NCW5 288 aa10.05□□□□□ -0.8
USF1-208ENST00000528768 C1orf162Q8NEQ5 155 aaPredicted RBP10.05□□□□□ -0.8
USF1-208ENST00000528768 OR5P3Q8WZ94 311 aa10.05□□□□□ -0.8
USF1-208ENST00000528768 DCUN1D4Q92564 292 aa10.05□□□□□ -0.8
USF1-208ENST00000528768 TMEM230Q96A57 120 aa10.05□□□□□ -0.8
USF1-208ENST00000528768 MBD6Q96DN6 1003 aa10.05□□□□□ -0.8
USF1-208ENST00000528768 ARPC5LQ9BPX5 153 aa10.05□□□□□ -0.8
USF1-208ENST00000528768 FN3KRPQ9HA64 309 aa10.05□□□□□ -0.8
USF1-208ENST00000528768 PLSCR2Q9NRY7 297 aa10.05□□□□□ -0.8
USF1-208ENST00000528768 RDH8Q9NYR8 311 aa10.05□□□□□ -0.8
USF1-208ENST00000528768 CLCF1Q9UBD9 225 aa10.05□□□□□ -0.8
USF1-208ENST00000528768 CRYM-AS1A6NIL9 109 aa10.04□□□□□ -0.8
USF1-208ENST00000528768 H7C1Q1 480 aa10.04□□□□□ -0.8
USF1-208ENST00000528768 IL18BPO95998 194 aa10.04□□□□□ -0.8
USF1-208ENST00000528768 CCL2P13500 99 aa10.04□□□□□ -0.8
USF1-208ENST00000528768 S100GP29377 79 aa10.04□□□□□ -0.8
USF1-208ENST00000528768 FOXG1P55316 489 aaPredicted RBP10.04□□□□□ -0.8
USF1-208ENST00000528768 SRPXP78539 464 aa10.04□□□□□ -0.8
USF1-208ENST00000528768 IL24Q13007 206 aa10.04□□□□□ -0.8
USF1-208ENST00000528768 BAMBIQ13145 260 aa10.04□□□□□ -0.8
USF1-208ENST00000528768 HIKESHIQ53FT3 197 aa10.04□□□□□ -0.8
USF1-208ENST00000528768 RNFT1Q5M7Z0 435 aa10.04□□□□□ -0.8
USF1-208ENST00000528768 PRSS54Q6PEW0 395 aa10.04□□□□□ -0.8
USF1-208ENST00000528768 FBXW12Q6X9E4 464 aa10.04□□□□□ -0.8
USF1-208ENST00000528768 Q6ZT83 130 aa10.04□□□□□ -0.8
USF1-208ENST00000528768 CALHM1Q8IU99 346 aa10.04□□□□□ -0.8
USF1-208ENST00000528768 C1orf174Q8IYL3 243 aa10.04□□□□□ -0.8
USF1-208ENST00000528768 NEK7Q8TDX7 302 aa10.04□□□□□ -0.8
USF1-208ENST00000528768 ST8SIA2Q92186 375 aa10.04□□□□□ -0.8
USF1-208ENST00000528768 GTF3AQ92664 365 aaKnown RBP10.04□□□□□ -0.8
USF1-208ENST00000528768 SLAMF9Q96A28 289 aa10.04□□□□□ -0.8
USF1-208ENST00000528768 C18orf12Q96KH6 178 aa10.04□□□□□ -0.8
USF1-208ENST00000528768 MDFIQ99750 246 aa10.04□□□□□ -0.8
USF1-208ENST00000528768 ZNF471Q9BX82 626 aaPredicted RBP10.04□□□□□ -0.8
USF1-208ENST00000528768 SUCNR1Q9BXA5 334 aa10.04□□□□□ -0.8
USF1-208ENST00000528768 OBP2BQ9NPH6 170 aa10.04□□□□□ -0.8
USF1-208ENST00000528768 MBD2Q9UBB5 411 aa10.04□□□□□ -0.8
USF1-208ENST00000528768 DNAJB11Q9UBS4 358 aa10.04□□□□□ -0.8
USF1-208ENST00000528768 POLDIP2Q9Y2S7 368 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms