RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-208ENST00000528475 AKIRIN2Q53H80 203 aa20.08■□□□□ 0.81
GSDMD-208ENST00000528475 TMEM182Q6ZP80 229 aaPredicted RBP20.08■□□□□ 0.81
GSDMD-208ENST00000528475 ZNF561Q8N587 486 aa20.08■□□□□ 0.81
GSDMD-208ENST00000528475 SLAMF9Q96A28 289 aa20.08■□□□□ 0.81
GSDMD-208ENST00000528475 BOKQ9UMX3 212 aaPredicted RBP20.08■□□□□ 0.81
GSDMD-208ENST00000528475 SHANK1Q9Y566 2161 aa20.08■□□□□ 0.8
GSDMD-208ENST00000528475 KIR2DS1A0A191URI9 304 aa20.07■□□□□ 0.8
GSDMD-208ENST00000528475 AGAP20933 346 aa20.07■□□□□ 0.8
GSDMD-208ENST00000528475 UCP1P25874 307 aa20.07■□□□□ 0.8
GSDMD-208ENST00000528475 AKR1C3P42330 323 aa20.07■□□□□ 0.8
GSDMD-208ENST00000528475 KIR2DS4P43632 304 aa20.07■□□□□ 0.8
GSDMD-208ENST00000528475 S100A12P80511 92 aa20.07■□□□□ 0.8
GSDMD-208ENST00000528475 KIR2DS1Q14954 304 aa20.07■□□□□ 0.8
GSDMD-208ENST00000528475 KCNJ16Q9NPI9 418 aa20.07■□□□□ 0.8
GSDMD-208ENST00000528475 POLR2GP62487 172 aaKnown RBP eCLIP20.07■□□□□ 0.8
GSDMD-208ENST00000528475 NMSQ5H8A3 153 aa20.07■□□□□ 0.8
GSDMD-208ENST00000528475 ZNF818PQ6ZRF7 136 aa20.07■□□□□ 0.8
GSDMD-208ENST00000528475 ZDHHC23Q8IYP9 409 aa20.07■□□□□ 0.8
GSDMD-208ENST00000528475 OR1J1Q8NGS3 322 aa20.07■□□□□ 0.8
GSDMD-208ENST00000528475 FAM213BQ8TBF2 198 aa20.07■□□□□ 0.8
GSDMD-208ENST00000528475 CT55Q8WUE5 264 aa20.07■□□□□ 0.8
GSDMD-208ENST00000528475 PSMF1Q92530 271 aa20.07■□□□□ 0.8
GSDMD-208ENST00000528475 IP6K3Q96PC2 410 aa20.07■□□□□ 0.8
GSDMD-208ENST00000528475 ARID1AO14497 2285 aa20.07■□□□□ 0.8
GSDMD-208ENST00000528475 SLC22A20A6NK97 555 aa20.06■□□□□ 0.8
GSDMD-208ENST00000528475 SS18L1O75177 396 aaPredicted RBP20.06■□□□□ 0.8
GSDMD-208ENST00000528475 SCTP09683 121 aa20.06■□□□□ 0.8
GSDMD-208ENST00000528475 HOXB1P14653 301 aaPredicted RBP20.06■□□□□ 0.8
GSDMD-208ENST00000528475 PPP1CCP36873 323 aaKnown RBP20.06■□□□□ 0.8
GSDMD-208ENST00000528475 HAAOP46952 286 aa20.06■□□□□ 0.8
GSDMD-208ENST00000528475 MKXQ8IYA7 352 aa20.06■□□□□ 0.8
GSDMD-208ENST00000528475 TMEM252Q8N6L7 170 aa20.06■□□□□ 0.8
GSDMD-208ENST00000528475 LILRB1Q8NHL6 650 aaPredicted RBP20.06■□□□□ 0.8
GSDMD-208ENST00000528475 GTF3AQ92664 365 aaKnown RBP20.06■□□□□ 0.8
GSDMD-208ENST00000528475 IL22RA2Q969J5 263 aa20.06■□□□□ 0.8
GSDMD-208ENST00000528475 C5orf52A6NGY3 159 aa20.06■□□□□ 0.8
GSDMD-208ENST00000528475 M0R036 132 aa20.06■□□□□ 0.8
GSDMD-208ENST00000528475 IGHV3-9P01782 118 aa20.06■□□□□ 0.8
GSDMD-208ENST00000528475 ATP6V0CP27449 155 aa20.06■□□□□ 0.8
GSDMD-208ENST00000528475 RAB1AP62820 205 aa20.06■□□□□ 0.8
GSDMD-208ENST00000528475 ID3Q02535 119 aa20.06■□□□□ 0.8
GSDMD-208ENST00000528475 HERPUD1Q15011 391 aa20.06■□□□□ 0.8
GSDMD-208ENST00000528475 SPIN3Q5JUX0 258 aa20.06■□□□□ 0.8
GSDMD-208ENST00000528475 C6orf15Q6UXA7 325 aaPredicted RBP20.06■□□□□ 0.8
GSDMD-208ENST00000528475 GAPTQ8N292 157 aa20.06■□□□□ 0.8
GSDMD-208ENST00000528475 FBXO7Q9Y3I1 522 aa20.06■□□□□ 0.8
GSDMD-208ENST00000528475 ATP23Q9Y6H3 246 aa20.06■□□□□ 0.8
GSDMD-208ENST00000528475 BTBD17A6NE02 478 aa20.05■□□□□ 0.8
GSDMD-208ENST00000528475 VDAC1P21796 283 aa20.05■□□□□ 0.8
GSDMD-208ENST00000528475 SLC23A3Q6PIS1 610 aa20.05■□□□□ 0.8
GSDMD-208ENST00000528475 MRPL21Q7Z2W9 205 aaKnown RBP20.05■□□□□ 0.8
GSDMD-208ENST00000528475 BATF2Q8N1L9 274 aa20.05■□□□□ 0.8
GSDMD-208ENST00000528475 OR2G3Q8NGZ4 309 aa20.05■□□□□ 0.8
GSDMD-208ENST00000528475 APOBEC3DQ96AK3 386 aaPredicted RBP20.05■□□□□ 0.8
GSDMD-208ENST00000528475 RIMS4Q9H426 269 aaPredicted RBP20.05■□□□□ 0.8
GSDMD-208ENST00000528475 TNRC6AQ8NDV7 1962 aaKnown RBP20.05■□□□□ 0.8
GSDMD-208ENST00000528475 ZNF724A8MTY0 619 aa20.04■□□□□ 0.8
GSDMD-208ENST00000528475 HSPA12AO43301 675 aa20.04■□□□□ 0.8
GSDMD-208ENST00000528475 ADAM20O43506 726 aa20.04■□□□□ 0.8
GSDMD-208ENST00000528475 GPM6AP51674 278 aa20.04■□□□□ 0.8
GSDMD-208ENST00000528475 BAXQ07812 192 aa20.04■□□□□ 0.8
GSDMD-208ENST00000528475 CLINT1Q14677 625 aa20.04■□□□□ 0.8
GSDMD-208ENST00000528475 LINC00596Q86U02 117 aa20.04■□□□□ 0.8
GSDMD-208ENST00000528475 SIGLEC12Q96PQ1 595 aa20.04■□□□□ 0.8
GSDMD-208ENST00000528475 MTCH1Q9NZJ7 389 aa20.04■□□□□ 0.8
GSDMD-208ENST00000528475 PCSK5Q92824 1860 aa20.04■□□□□ 0.8
GSDMD-208ENST00000528475 ZNF732B4DXR9 585 aa20.04■□□□□ 0.8
GSDMD-208ENST00000528475 LHX2P50458 406 aa20.04■□□□□ 0.8
GSDMD-208ENST00000528475 SNRPEP62304 92 aaKnown RBP20.04■□□□□ 0.8
GSDMD-208ENST00000528475 VAMP2P63027 116 aa20.04■□□□□ 0.8
GSDMD-208ENST00000528475 OR5A2Q8NGI9 324 aa20.04■□□□□ 0.8
GSDMD-208ENST00000528475 OR5D13Q8NGL4 314 aa20.04■□□□□ 0.8
GSDMD-208ENST00000528475 MALSU1Q96EH3 234 aa20.04■□□□□ 0.8
GSDMD-208ENST00000528475 HS3ST6Q96QI5 342 aa20.04■□□□□ 0.8
GSDMD-208ENST00000528475 IFT22Q9H7X7 185 aa20.04■□□□□ 0.8
GSDMD-208ENST00000528475 CRIM1Q9NZV1 1036 aa20.04■□□□□ 0.8
GSDMD-208ENST00000528475 COL27A1Q8IZC6 1860 aaPredicted RBP20.04■□□□□ 0.8
GSDMD-208ENST00000528475 TRBV6-6A0A0A6YYG2 114 aa20.03■□□□□ 0.8
GSDMD-208ENST00000528475 IGKV1D-13A0A0B4J2D9 117 aa20.03■□□□□ 0.8
GSDMD-208ENST00000528475 PROB1E7EW31 1015 aa20.03■□□□□ 0.8
GSDMD-208ENST00000528475 TRAPPC2LH3BP13 241 aa20.03■□□□□ 0.8
GSDMD-208ENST00000528475 UBE2CO00762 179 aa20.03■□□□□ 0.8
GSDMD-208ENST00000528475 SSSCA1O60232 199 aa20.03■□□□□ 0.8
GSDMD-208ENST00000528475 EIF3GO75821 320 aaKnown RBP eCLIP20.03■□□□□ 0.8
GSDMD-208ENST00000528475 IGKV1-13P0DP09 117 aa20.03■□□□□ 0.8
GSDMD-208ENST00000528475 MAS1LP35410 378 aa20.03■□□□□ 0.8
GSDMD-208ENST00000528475 ASCL1P50553 236 aa20.03■□□□□ 0.8
GSDMD-208ENST00000528475 CXorf66Q5JRM2 361 aaPredicted RBP20.03■□□□□ 0.8
GSDMD-208ENST00000528475 SP5Q6BEB4 398 aaPredicted RBP20.03■□□□□ 0.8
GSDMD-208ENST00000528475 TIPARPQ7Z3E1 657 aaKnown RBP20.03■□□□□ 0.8
GSDMD-208ENST00000528475 SUMF1Q8NBK3 374 aa20.03■□□□□ 0.8
GSDMD-208ENST00000528475 TMEM171Q8WVE6 324 aa20.03■□□□□ 0.8
GSDMD-208ENST00000528475 FAM173AQ9BQD7 235 aa20.03■□□□□ 0.8
GSDMD-208ENST00000528475 PLK3Q9H4B4 646 aa20.03■□□□□ 0.8
GSDMD-208ENST00000528475 OPA3Q9H6K4 179 aa20.03■□□□□ 0.8
GSDMD-208ENST00000528475 LRFN1Q9P244 771 aa20.03■□□□□ 0.8
GSDMD-208ENST00000528475 H0Y980 276 aa20.03■□□□□ 0.8
GSDMD-208ENST00000528475 LAMTOR5O43504 91 aa20.03■□□□□ 0.8
GSDMD-208ENST00000528475 SULT1A1P50225 295 aa20.03■□□□□ 0.8
GSDMD-208ENST00000528475 SPSB3Q6PJ21 355 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms