RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 LILRB1Q8NHL6 650 aaPredicted RBP12.55□□□□□ -0.4
ECHDC1-220ENST00000528402 MRPL30Q8TCC3 161 aaKnown RBP12.55□□□□□ -0.4
ECHDC1-220ENST00000528402 TOMM40LQ969M1 308 aa12.55□□□□□ -0.4
ECHDC1-220ENST00000528402 HS3ST6Q96QI5 342 aa12.55□□□□□ -0.4
ECHDC1-220ENST00000528402 SCNM1Q9BWG6 230 aa12.55□□□□□ -0.4
ECHDC1-220ENST00000528402 C1QTNF6Q9BXI9 259 aa12.55□□□□□ -0.4
ECHDC1-220ENST00000528402 LIME1Q9H400 295 aa12.55□□□□□ -0.4
ECHDC1-220ENST00000528402 HES4Q9HCC6 221 aa12.55□□□□□ -0.4
ECHDC1-220ENST00000528402 SLC2A9Q9NRM0 540 aa12.55□□□□□ -0.4
ECHDC1-220ENST00000528402 MED9Q9NWA0 146 aa12.55□□□□□ -0.4
ECHDC1-220ENST00000528402 MUC6Q6W4X9 2439 aa12.55□□□□□ -0.4
ECHDC1-220ENST00000528402 NPIPB11E5RHQ5 1161 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 ERVH48-1M5A8F1 160 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 GPR31O00270 319 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 HS3ST1O14792 307 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 TUSC2O75896 110 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 NXPH2O95156 264 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 CFDP00746 253 aaPredicted RBP12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 LMO1P25800 156 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 MPV17P39210 176 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 KCNJ3P48549 501 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 UCNP55089 124 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 FXYD4P59646 89 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 NAAAQ02083 359 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 TMEM187Q14656 261 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 RGS7BPQ6MZT1 257 aaPredicted RBP12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 ZNF474Q6S9Z5 364 aaPredicted RBP12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 LIAT1Q6ZQX7 453 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 WDR86Q86TI4 376 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 GAPTQ8N292 157 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 OR5T2Q8NGG2 359 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 SEBOXQ9HB31 216 aaPredicted RBP12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 ELOVL5Q9NYP7 299 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 TUBD1Q9UJT1 453 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 RPS10-NUDT3A0A1W2PQS6 291 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 K7EM74 188 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 CDIPTO14735 213 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 MPPED1O15442 326 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 ADAP1O75689 374 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 CRYAAP02489 173 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 RPS23P62266 143 aaKnown RBP12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 HLA-DRB3P79483 266 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 SMCO1Q147U7 214 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 TBR1Q16650 682 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 LRRC37A5PQ49AS3 106 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 PAN3Q58A45 887 aaKnown RBP12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 IGSF11Q5DX21 431 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 Q6ZPA2 131 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 BATF2Q8N1L9 274 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 PRR7Q8TB68 274 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 RDH5Q92781 318 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 MARVELD3Q96A59 401 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 ZNF488Q96MN9 340 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 ARPC5LQ9BPX5 153 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 CABLES2Q9BTV7 478 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 RNF126Q9BV68 326 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 SLC25A32Q9H2D1 315 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 TMEM165Q9HC07 324 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 MBD2Q9UBB5 411 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 TMED3Q9Y3Q3 217 aa12.54□□□□□ -0.4
ECHDC1-220ENST00000528402 ZFHX2Q9C0A1 2572 aaPredicted RBP12.53□□□□□ -0.4
ECHDC1-220ENST00000528402 DUXBA0A1W2PPF3 345 aa12.53□□□□□ -0.4
ECHDC1-220ENST00000528402 RNF222A6NCQ9 220 aa12.53□□□□□ -0.4
ECHDC1-220ENST00000528402 A8MXE2 369 aa12.53□□□□□ -0.4
ECHDC1-220ENST00000528402 IFNL4K9M1U5 179 aa12.53□□□□□ -0.4
ECHDC1-220ENST00000528402 OR2H2O95918 312 aa12.53□□□□□ -0.4
ECHDC1-220ENST00000528402 GRPP07492 148 aa12.53□□□□□ -0.4
ECHDC1-220ENST00000528402 HOXB5P09067 269 aa12.53□□□□□ -0.4
ECHDC1-220ENST00000528402 SCTP09683 121 aa12.53□□□□□ -0.4
ECHDC1-220ENST00000528402 GLI4P10075 376 aa12.53□□□□□ -0.4
ECHDC1-220ENST00000528402 DUSP1P28562 367 aa12.53□□□□□ -0.4
ECHDC1-220ENST00000528402 GLRXP35754 106 aa12.53□□□□□ -0.4
ECHDC1-220ENST00000528402 EIF5AP63241 154 aaKnown RBP12.53□□□□□ -0.4
ECHDC1-220ENST00000528402 ALKBH6Q3KRA9 238 aa12.53□□□□□ -0.4
ECHDC1-220ENST00000528402 MRGPRGQ86SM5 289 aa12.53□□□□□ -0.4
ECHDC1-220ENST00000528402 LDLRAD3Q86YD5 345 aa12.53□□□□□ -0.4
ECHDC1-220ENST00000528402 CMTM1Q8IZ96 169 aa12.53□□□□□ -0.4
ECHDC1-220ENST00000528402 OR10Z1Q8NGY1 313 aa12.53□□□□□ -0.4
ECHDC1-220ENST00000528402 OR10J5Q8NHC4 309 aa12.53□□□□□ -0.4
ECHDC1-220ENST00000528402 DCUN1D4Q92564 292 aa12.53□□□□□ -0.4
ECHDC1-220ENST00000528402 KIRREL1Q96J84 757 aa12.53□□□□□ -0.4
ECHDC1-220ENST00000528402 IL36RNQ9UBH0 155 aa12.53□□□□□ -0.4
ECHDC1-220ENST00000528402 TINAGQ9UJW2 476 aa12.53□□□□□ -0.4
ECHDC1-220ENST00000528402 TP53TG5Q9Y2B4 290 aa12.53□□□□□ -0.4
ECHDC1-220ENST00000528402 WIPI2Q9Y4P8 454 aa12.53□□□□□ -0.4
ECHDC1-220ENST00000528402 HEATR1Q9H583 2144 aaKnown RBP12.52□□□□□ -0.41
ECHDC1-220ENST00000528402 GVINP1Q7Z2Y8 2422 aa12.52□□□□□ -0.41
ECHDC1-220ENST00000528402 C1QTNF9BB2RNN3 333 aa12.52□□□□□ -0.41
ECHDC1-220ENST00000528402 SLC33A1O00400 549 aaPredicted RBP12.52□□□□□ -0.41
ECHDC1-220ENST00000528402 TAAR5O14804 337 aa12.52□□□□□ -0.41
ECHDC1-220ENST00000528402 MLNRO43193 412 aa12.52□□□□□ -0.41
ECHDC1-220ENST00000528402 WNT2P09544 360 aa12.52□□□□□ -0.41
ECHDC1-220ENST00000528402 OR5AC1P0C628 307 aa12.52□□□□□ -0.41
ECHDC1-220ENST00000528402 ZNF250P15622 560 aa12.52□□□□□ -0.41
ECHDC1-220ENST00000528402 GNRHRP30968 328 aa12.52□□□□□ -0.41
ECHDC1-220ENST00000528402 FABP6P51161 128 aa12.52□□□□□ -0.41
ECHDC1-220ENST00000528402 TDGF1P3P51864 188 aa12.52□□□□□ -0.41
ECHDC1-220ENST00000528402 SELENOVP59797 346 aa12.52□□□□□ -0.41
ECHDC1-220ENST00000528402 RBPJQ06330 500 aa12.52□□□□□ -0.41
ECHDC1-220ENST00000528402 IAH1Q2TAA2 248 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms