RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 OR5D18Q8NGL1 313 aa7.78□□□□□ -1.16
CHD7-208ENST00000528280 CNIH3Q8TBE1 160 aa7.78□□□□□ -1.16
CHD7-208ENST00000528280 TNFAIP8L1Q8WVP5 186 aa7.78□□□□□ -1.16
CHD7-208ENST00000528280 TAF15Q92804 592 aaKnown RBP eCLIP7.78□□□□□ -1.16
CHD7-208ENST00000528280 GGHQ92820 318 aa7.78□□□□□ -1.16
CHD7-208ENST00000528280 GHSRQ92847 366 aa7.78□□□□□ -1.16
CHD7-208ENST00000528280 TMEM106AQ96A25 262 aa7.78□□□□□ -1.16
CHD7-208ENST00000528280 VCX3AQ9NNX9 186 aa7.78□□□□□ -1.16
CHD7-208ENST00000528280 DPM3Q9P2X0 92 aa7.78□□□□□ -1.16
CHD7-208ENST00000528280 ING4Q9UNL4 249 aa7.78□□□□□ -1.16
CHD7-208ENST00000528280 RYR3Q15413 4870 aa7.77□□□□□ -1.17
CHD7-208ENST00000528280 IGHV2-26A0A0B4J1V2 119 aa7.77□□□□□ -1.17
CHD7-208ENST00000528280 ODAMA1E959 279 aa7.77□□□□□ -1.17
CHD7-208ENST00000528280 LEUTXA8MZ59 168 aa7.77□□□□□ -1.17
CHD7-208ENST00000528280 SLC33A1O00400 549 aaPredicted RBP7.77□□□□□ -1.17
CHD7-208ENST00000528280 CLIC3O95833 236 aa7.77□□□□□ -1.17
CHD7-208ENST00000528280 GZMHP20718 246 aa7.77□□□□□ -1.17
CHD7-208ENST00000528280 BDH1Q02338 343 aa7.77□□□□□ -1.17
CHD7-208ENST00000528280 PAX5Q02548 391 aa7.77□□□□□ -1.17
CHD7-208ENST00000528280 LY6EQ16553 131 aa7.77□□□□□ -1.17
CHD7-208ENST00000528280 Q499Y3 187 aa7.77□□□□□ -1.17
CHD7-208ENST00000528280 KCTD21Q4G0X4 260 aa7.77□□□□□ -1.17
CHD7-208ENST00000528280 NHLRC3Q5JS37 347 aa7.77□□□□□ -1.17
CHD7-208ENST00000528280 OR2G6Q5TZ20 316 aa7.77□□□□□ -1.17
CHD7-208ENST00000528280 DMKNQ6E0U4 476 aaPredicted RBP7.77□□□□□ -1.17
CHD7-208ENST00000528280 CCDC144NLQ6NUI1 221 aa7.77□□□□□ -1.17
CHD7-208ENST00000528280 CRIP3Q6Q6R5 217 aa7.77□□□□□ -1.17
CHD7-208ENST00000528280 Q6ZTK2 550 aa7.77□□□□□ -1.17
CHD7-208ENST00000528280 C16orf82Q7Z2V1 217 aa7.77□□□□□ -1.17
CHD7-208ENST00000528280 OR10A7Q8NGE5 316 aa7.77□□□□□ -1.17
CHD7-208ENST00000528280 NDNFQ8TB73 568 aa7.77□□□□□ -1.17
CHD7-208ENST00000528280 PIFOQ8TCI5 191 aa7.77□□□□□ -1.17
CHD7-208ENST00000528280 C17orf50Q8WW18 174 aa7.77□□□□□ -1.17
CHD7-208ENST00000528280 TFAP2CQ92754 450 aa7.77□□□□□ -1.17
CHD7-208ENST00000528280 DGCR14Q96DF8 476 aaKnown RBP7.77□□□□□ -1.17
CHD7-208ENST00000528280 MRPS24Q96EL2 167 aaKnown RBP7.77□□□□□ -1.17
CHD7-208ENST00000528280 AKR1E2Q96JD6 320 aa7.77□□□□□ -1.17
CHD7-208ENST00000528280 PRSS22Q9GZN4 317 aa7.77□□□□□ -1.17
CHD7-208ENST00000528280 RAB9BQ9NP90 201 aa7.77□□□□□ -1.17
CHD7-208ENST00000528280 TAS2R4Q9NYW5 299 aa7.77□□□□□ -1.17
CHD7-208ENST00000528280 IL36GQ9NZH8 169 aa7.77□□□□□ -1.17
CHD7-208ENST00000528280 IL36RNQ9UBH0 155 aa7.77□□□□□ -1.17
CHD7-208ENST00000528280 PSORS1C1Q9UIG5 152 aa7.77□□□□□ -1.17
CHD7-208ENST00000528280 ERGIC3Q9Y282 383 aa7.77□□□□□ -1.17
CHD7-208ENST00000528280 A0A087X0M5 115 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 KBTBD11-OT1A0A1B0GTJ5 212 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 A0A1B0GX30 115 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 MEGF11A6BM72 1044 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 TRIM64CA6NLI5 447 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 OOSP1A8MZH6 123 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 F2RL2O00254 374 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 GABRPO00591 440 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 HTR3BO95264 441 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 SMIM18P0DKX4 95 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 GTF2F2P13984 249 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 MYF6P23409 242 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 CDK2P24941 298 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 MAPK3P27361 379 aaPredicted RBP7.76□□□□□ -1.17
CHD7-208ENST00000528280 CD34P28906 385 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 GLIPR1P48060 266 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 HERPUD1Q15011 391 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 MPV17LQ2QL34 196 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 PAN3Q58A45 887 aaKnown RBP7.76□□□□□ -1.17
CHD7-208ENST00000528280 DDI2Q5TDH0 399 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 RNLSQ5VYX0 342 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 LHFPL4Q7Z7J7 247 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 OSR2Q8N2R0 312 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 MS4A15Q8N5U1 240 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 TPRX1Q8N7U7 411 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 OR51A2Q8NGJ7 313 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 CAPSLQ8WWF8 208 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 MYDGFQ969H8 173 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 MMP27Q9H306 513 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 IFT22Q9H7X7 185 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 SPACA1Q9HBV2 294 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 SCN3BQ9NY72 215 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 CLEC2DQ9UHP7 191 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 FOXJ3Q9UPW0 622 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 TCF19Q9Y242 345 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 ST3GAL6Q9Y274 331 aa7.76□□□□□ -1.17
CHD7-208ENST00000528280 MEIKINA0A087WXM9 373 aa7.75□□□□□ -1.17
CHD7-208ENST00000528280 TRBV5-5A0A0J9YX44 114 aa7.75□□□□□ -1.17
CHD7-208ENST00000528280 A6NDX4 124 aa7.75□□□□□ -1.17
CHD7-208ENST00000528280 ZNF701M0R085 212 aaPredicted RBP7.75□□□□□ -1.17
CHD7-208ENST00000528280 MYL12BO14950 172 aa7.75□□□□□ -1.17
CHD7-208ENST00000528280 PEX14O75381 377 aa7.75□□□□□ -1.17
CHD7-208ENST00000528280 IGFBP3P17936 291 aaPredicted RBP7.75□□□□□ -1.17
CHD7-208ENST00000528280 MNDAP41218 407 aa7.75□□□□□ -1.17
CHD7-208ENST00000528280 RANBP1P43487 201 aa7.75□□□□□ -1.17
CHD7-208ENST00000528280 EFNB2P52799 333 aa7.75□□□□□ -1.17
CHD7-208ENST00000528280 WNT4P56705 351 aa7.75□□□□□ -1.17
CHD7-208ENST00000528280 EMX1Q04741 257 aaPredicted RBP7.75□□□□□ -1.17
CHD7-208ENST00000528280 DOC2BQ14184 412 aa7.75□□□□□ -1.17
CHD7-208ENST00000528280 RBM39Q14498 530 aaKnown RBP7.75□□□□□ -1.17
CHD7-208ENST00000528280 C2orf68Q2NKX9 166 aa7.75□□□□□ -1.17
CHD7-208ENST00000528280 TCF23Q7RTU1 214 aa7.75□□□□□ -1.17
CHD7-208ENST00000528280 NANOGP1Q8N7R0 232 aa7.75□□□□□ -1.17
CHD7-208ENST00000528280 ZNF485Q8NCK3 441 aa7.75□□□□□ -1.17
CHD7-208ENST00000528280 BPIFB6Q8NFQ5 453 aa7.75□□□□□ -1.17
CHD7-208ENST00000528280 OR9G1Q8NH87 305 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms