RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 WNT4P56705 351 aa12.55□□□□□ -0.4
CAPN1-213ENST00000527897 RBM39Q14498 530 aaKnown RBP12.55□□□□□ -0.4
CAPN1-213ENST00000527897 IL13RA2Q14627 380 aa12.55□□□□□ -0.4
CAPN1-213ENST00000527897 ELP2Q6IA86 826 aa12.55□□□□□ -0.4
CAPN1-213ENST00000527897 OR52W1Q6IF63 320 aa12.55□□□□□ -0.4
CAPN1-213ENST00000527897 HEPN1Q6WQI6 88 aa12.55□□□□□ -0.4
CAPN1-213ENST00000527897 OSR2Q8N2R0 312 aa12.55□□□□□ -0.4
CAPN1-213ENST00000527897 JAGN1Q8N5M9 183 aa12.55□□□□□ -0.4
CAPN1-213ENST00000527897 ZNF485Q8NCK3 441 aa12.55□□□□□ -0.4
CAPN1-213ENST00000527897 TFAP2CQ92754 450 aa12.55□□□□□ -0.4
CAPN1-213ENST00000527897 CORO2AQ92828 525 aa12.55□□□□□ -0.4
CAPN1-213ENST00000527897 PGLYRP3Q96LB9 341 aa12.55□□□□□ -0.4
CAPN1-213ENST00000527897 NPFFR1Q9GZQ6 430 aa12.55□□□□□ -0.4
CAPN1-213ENST00000527897 PLCXD1Q9NUJ7 323 aa12.55□□□□□ -0.4
CAPN1-213ENST00000527897 TAS2R3Q9NYW6 316 aa12.55□□□□□ -0.4
CAPN1-213ENST00000527897 OR6C3Q9NZP0 311 aa12.55□□□□□ -0.4
CAPN1-213ENST00000527897 ZNF581Q9P0T4 197 aa12.55□□□□□ -0.4
CAPN1-213ENST00000527897 KIF25Q9UIL4 384 aa12.55□□□□□ -0.4
CAPN1-213ENST00000527897 ST3GAL6Q9Y274 331 aa12.55□□□□□ -0.4
CAPN1-213ENST00000527897 ERGIC3Q9Y282 383 aa12.55□□□□□ -0.4
CAPN1-213ENST00000527897 TRAV24A0A0B4J272 114 aa12.54□□□□□ -0.4
CAPN1-213ENST00000527897 M0QZ24 198 aa12.54□□□□□ -0.4
CAPN1-213ENST00000527897 TOR1AO14656 332 aa12.54□□□□□ -0.4
CAPN1-213ENST00000527897 TIMM23O14925 209 aa12.54□□□□□ -0.4
CAPN1-213ENST00000527897 MAS1P04201 325 aa12.54□□□□□ -0.4
CAPN1-213ENST00000527897 AQP4P55087 323 aa12.54□□□□□ -0.4
CAPN1-213ENST00000527897 RPS11P62280 158 aaKnown RBP eCLIP12.54□□□□□ -0.4
CAPN1-213ENST00000527897 LTC4SQ16873 150 aa12.54□□□□□ -0.4
CAPN1-213ENST00000527897 SLC22A6Q4U2R8 563 aa12.54□□□□□ -0.4
CAPN1-213ENST00000527897 ARSJQ5FYB0 599 aaPredicted RBP12.54□□□□□ -0.4
CAPN1-213ENST00000527897 MINOS1Q5TGZ0 78 aa12.54□□□□□ -0.4
CAPN1-213ENST00000527897 OR51T1Q8NGJ9 327 aa12.54□□□□□ -0.4
CAPN1-213ENST00000527897 OR2T6Q8NHC8 308 aa12.54□□□□□ -0.4
CAPN1-213ENST00000527897 FBLIM1Q8WUP2 373 aa12.54□□□□□ -0.4
CAPN1-213ENST00000527897 BARHL1Q9BZE3 327 aa12.54□□□□□ -0.4
CAPN1-213ENST00000527897 TCF19Q9Y242 345 aa12.54□□□□□ -0.4
CAPN1-213ENST00000527897 MINOS1-NBL1R4GNA1 71 aa12.54□□□□□ -0.4
CAPN1-213ENST00000527897 TRAV39A0A0B4J263 110 aa12.53□□□□□ -0.4
CAPN1-213ENST00000527897 A0A1W2PP11 408 aa12.53□□□□□ -0.4
CAPN1-213ENST00000527897 ZNF729A6NN14 1252 aaPredicted RBP12.53□□□□□ -0.4
CAPN1-213ENST00000527897 VGLL3A8MV65 326 aa12.53□□□□□ -0.4
CAPN1-213ENST00000527897 IGHV3-7P01780 117 aa12.53□□□□□ -0.4
CAPN1-213ENST00000527897 IGFBP3P17936 291 aaPredicted RBP12.53□□□□□ -0.4
CAPN1-213ENST00000527897 RBM11P57052 281 aaKnown RBP12.53□□□□□ -0.4
CAPN1-213ENST00000527897 DOC2BQ14184 412 aa12.53□□□□□ -0.4
CAPN1-213ENST00000527897 ATAD3CQ5T2N8 411 aa12.53□□□□□ -0.4
CAPN1-213ENST00000527897 CCBE1Q6UXH8 406 aaPredicted RBP12.53□□□□□ -0.4
CAPN1-213ENST00000527897 LIAT1Q6ZQX7 453 aa12.53□□□□□ -0.4
CAPN1-213ENST00000527897 NANOGP1Q8N7R0 232 aa12.53□□□□□ -0.4
CAPN1-213ENST00000527897 C11orf44Q8N8P7 122 aa12.53□□□□□ -0.4
CAPN1-213ENST00000527897 OR4P4Q8NGL7 312 aa12.53□□□□□ -0.4
CAPN1-213ENST00000527897 OR13A1Q8NGR1 328 aa12.53□□□□□ -0.4
CAPN1-213ENST00000527897 PLPPR1Q8TBJ4 325 aa12.53□□□□□ -0.4
CAPN1-213ENST00000527897 ZNF596Q8TC21 504 aa12.53□□□□□ -0.4
CAPN1-213ENST00000527897 MRGPRDQ8TDS7 321 aa12.53□□□□□ -0.4
CAPN1-213ENST00000527897 NEK7Q8TDX7 302 aa12.53□□□□□ -0.4
CAPN1-213ENST00000527897 NRG4Q8WWG1 115 aa12.53□□□□□ -0.4
CAPN1-213ENST00000527897 MUL1Q969V5 352 aa12.53□□□□□ -0.4
CAPN1-213ENST00000527897 DPCDQ9BVM2 203 aaPredicted RBP12.53□□□□□ -0.4
CAPN1-213ENST00000527897 ZNF286AQ9HBT8 521 aa12.53□□□□□ -0.4
CAPN1-213ENST00000527897 PAK1IP1Q9NWT1 392 aaPredicted RBP12.53□□□□□ -0.4
CAPN1-213ENST00000527897 FBLN5Q9UBX5 448 aa12.53□□□□□ -0.4
CAPN1-213ENST00000527897 PITPNC1Q9UKF7 332 aa12.53□□□□□ -0.4
CAPN1-213ENST00000527897 TRBV5-7A0A0A0MS05 114 aa12.52□□□□□ -0.41
CAPN1-213ENST00000527897 A6NDX4 124 aa12.52□□□□□ -0.41
CAPN1-213ENST00000527897 GEMIN2O14893 280 aaKnown RBP12.52□□□□□ -0.41
CAPN1-213ENST00000527897 VSIG10L2P0DP72 767 aa12.52□□□□□ -0.41
CAPN1-213ENST00000527897 CD24P25063 80 aa12.52□□□□□ -0.41
CAPN1-213ENST00000527897 KIR2DS4P43632 304 aa12.52□□□□□ -0.41
CAPN1-213ENST00000527897 HABP2Q14520 560 aaPredicted RBP12.52□□□□□ -0.41
CAPN1-213ENST00000527897 C17orf58Q2M2W7 97 aa12.52□□□□□ -0.41
CAPN1-213ENST00000527897 C6orf141Q5SZD1 244 aa12.52□□□□□ -0.41
CAPN1-213ENST00000527897 HIST2H2BDQ6DRA6 164 aa12.52□□□□□ -0.41
CAPN1-213ENST00000527897 ASCL4Q6XD76 172 aa12.52□□□□□ -0.41
CAPN1-213ENST00000527897 RTN4RL2Q86UN3 420 aa12.52□□□□□ -0.41
CAPN1-213ENST00000527897 ZNF565Q8N9K5 539 aa12.52□□□□□ -0.41
CAPN1-213ENST00000527897 SUMF2Q8NBJ7 301 aa12.52□□□□□ -0.41
CAPN1-213ENST00000527897 RFESDQ8TAC1 157 aa12.52□□□□□ -0.41
CAPN1-213ENST00000527897 LEAP2Q969E1 77 aa12.52□□□□□ -0.41
CAPN1-213ENST00000527897 DERL3Q96Q80 235 aa12.52□□□□□ -0.41
CAPN1-213ENST00000527897 CDCA4Q9BXL8 241 aa12.52□□□□□ -0.41
CAPN1-213ENST00000527897 FKBP14Q9NWM8 211 aa12.52□□□□□ -0.41
CAPN1-213ENST00000527897 SCN3BQ9NY72 215 aa12.52□□□□□ -0.41
CAPN1-213ENST00000527897 CALYQ9NYX4 217 aa12.52□□□□□ -0.41
CAPN1-213ENST00000527897 DPM3Q9P2X0 92 aa12.52□□□□□ -0.41
CAPN1-213ENST00000527897 FOXJ3Q9UPW0 622 aa12.52□□□□□ -0.41
CAPN1-213ENST00000527897 MRPS28Q9Y2Q9 187 aaKnown RBP12.52□□□□□ -0.41
CAPN1-213ENST00000527897 CMYA5Q8N3K9 4069 aa12.52□□□□□ -0.41
CAPN1-213ENST00000527897 TET2Q6N021 2002 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-213ENST00000527897 KBTBD11-OT1A0A1B0GTJ5 212 aa12.51□□□□□ -0.41
CAPN1-213ENST00000527897 CDK1P06493 297 aa12.51□□□□□ -0.41
CAPN1-213ENST00000527897 GTF2F2P13984 249 aa12.51□□□□□ -0.41
CAPN1-213ENST00000527897 FSTP19883 344 aa12.51□□□□□ -0.41
CAPN1-213ENST00000527897 PRRX1P54821 245 aa12.51□□□□□ -0.41
CAPN1-213ENST00000527897 BDH1Q02338 343 aa12.51□□□□□ -0.41
CAPN1-213ENST00000527897 GABPB1Q06547 395 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-213ENST00000527897 UTF1Q5T230 341 aa12.51□□□□□ -0.41
CAPN1-213ENST00000527897 RSBN1Q5VWQ0 802 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-213ENST00000527897 AWAT2Q6E213 333 aa12.51□□□□□ -0.41
CAPN1-213ENST00000527897 GLIPR1L1Q6UWM5 242 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms