RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 GLB1LQ6UWU2 654 aa5.05□□□□□ -1.6
CD44-225ENST00000527326 Q6ZVH6 145 aa5.05□□□□□ -1.6
CD44-225ENST00000527326 RTN4RL2Q86UN3 420 aa5.05□□□□□ -1.6
CD44-225ENST00000527326 LINC00346Q8IVM7 164 aa5.05□□□□□ -1.6
CD44-225ENST00000527326 ZNF440Q8IYI8 595 aa5.05□□□□□ -1.6
CD44-225ENST00000527326 SAXO1Q8IYX7 474 aa5.05□□□□□ -1.6
CD44-225ENST00000527326 TMEM256Q8N2U0 113 aa5.05□□□□□ -1.6
CD44-225ENST00000527326 SIGLECL1Q8N7X8 197 aa5.05□□□□□ -1.6
CD44-225ENST00000527326 ZIC4Q8N9L1 334 aa5.05□□□□□ -1.6
CD44-225ENST00000527326 NPEPL1Q8NDH3 523 aa5.05□□□□□ -1.6
CD44-225ENST00000527326 OR2Z1Q8NG97 314 aa5.05□□□□□ -1.6
CD44-225ENST00000527326 OR2AJ1Q8NGZ0 328 aa5.05□□□□□ -1.6
CD44-225ENST00000527326 ACER1Q8TDN7 264 aa5.05□□□□□ -1.6
CD44-225ENST00000527326 CACNG8Q8WXS5 425 aa5.05□□□□□ -1.6
CD44-225ENST00000527326 RAB8BQ92930 207 aa5.05□□□□□ -1.6
CD44-225ENST00000527326 ZG16BQ96DA0 208 aa5.05□□□□□ -1.6
CD44-225ENST00000527326 Q96M66 194 aa5.05□□□□□ -1.6
CD44-225ENST00000527326 ZNF681Q96N22 645 aa5.05□□□□□ -1.6
CD44-225ENST00000527326 RSG1Q9BU20 258 aa5.05□□□□□ -1.6
CD44-225ENST00000527326 SAMD10Q9BYL1 202 aa5.05□□□□□ -1.6
CD44-225ENST00000527326 LINC00470Q9BZP3 86 aa5.05□□□□□ -1.6
CD44-225ENST00000527326 SH3BGRL3Q9H299 93 aa5.05□□□□□ -1.6
CD44-225ENST00000527326 GEMIN7Q9H840 131 aaKnown RBP5.05□□□□□ -1.6
CD44-225ENST00000527326 ZMAT3Q9HA38 289 aaKnown RBP5.05□□□□□ -1.6
CD44-225ENST00000527326 PRSS16Q9NQE7 514 aa5.05□□□□□ -1.6
CD44-225ENST00000527326 HIF1ANQ9NWT6 349 aa5.05□□□□□ -1.6
CD44-225ENST00000527326 CLEC1BQ9P126 229 aa5.05□□□□□ -1.6
CD44-225ENST00000527326 WNT16Q9UBV4 365 aa5.05□□□□□ -1.6
CD44-225ENST00000527326 MRM2Q9UI43 246 aaKnown RBP5.05□□□□□ -1.6
CD44-225ENST00000527326 GJD2Q9UKL4 321 aa5.05□□□□□ -1.6
CD44-225ENST00000527326 MMP17Q9ULZ9 603 aa5.05□□□□□ -1.6
CD44-225ENST00000527326 ANAPC10Q9UM13 185 aa5.05□□□□□ -1.6
CD44-225ENST00000527326 LSM5Q9Y4Y9 91 aaKnown RBP5.05□□□□□ -1.6
CD44-225ENST00000527326 HS3ST4Q9Y661 456 aa5.05□□□□□ -1.6
CD44-225ENST00000527326 SZT2Q5T011 3432 aa5.05□□□□□ -1.6
CD44-225ENST00000527326 GREB1Q4ZG55 1949 aa5.05□□□□□ -1.6
CD44-225ENST00000527326 PAPPA2Q9BXP8 1791 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 IGLV3-10A0A075B6K4 115 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 TRAV9-1A0A075B6T8 112 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 TRAV8-7A0A075B6U6 113 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 SAA2-SAA4A0A096LPE2 208 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 NSG1A0A0A6YYJ2 146 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 TRAV34A0A0B4J273 112 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 TRBV5-4A0A0C4DH59 114 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 A0A0G2JMM0 328 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 TRBV7-9A0A0J9YWB2 115 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 A0A0U1RQK1 487 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 A0A1W2PPB8 328 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 ODAMA1E959 279 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 KIR3DP1A8MWS1 328 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 NPIPB6E9PJ23 425 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 C17orf112F2Z3M2 114 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 IFNL4K9M1U5 179 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 CLDN5O00501 218 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 CDC42EP2O14613 210 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 TLX3O43711 291 aaPredicted RBP5.04□□□□□ -1.6
CD44-225ENST00000527326 KBTBD11O94819 623 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 VENTXO95231 258 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 GPR75O95800 540 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 KLKB1P03952 638 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 FTH1P19P0C7X4 201 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 AADACP22760 399 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 RPS12P25398 132 aaKnown RBP5.04□□□□□ -1.6
CD44-225ENST00000527326 ACRV1P26436 265 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 HRH1P35367 487 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 BCL6P41182 706 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 CDKN2AP42771 156 aaKnown RBP5.04□□□□□ -1.6
CD44-225ENST00000527326 SOX2P48431 317 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 GPM6AP51674 278 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 CLDN6P56747 220 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 MLF1P58340 268 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 PLP1P60201 277 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 NANOS3P60323 173 aaKnown RBP5.04□□□□□ -1.6
CD44-225ENST00000527326 YPEL3P61236 119 aaPredicted RBP5.04□□□□□ -1.6
CD44-225ENST00000527326 PPP1CBP62140 327 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 FKBP1BP68106 108 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 PSG9Q00887 426 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 HSD52Q0P140 79 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 TSTA3Q13630 321 aaPredicted RBP5.04□□□□□ -1.6
CD44-225ENST00000527326 PDGFRLQ15198 375 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 ADIRFQ15847 76 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 LTC4SQ16873 150 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 PHYHD1Q5SRE7 291 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 SPATA46Q5T0L3 261 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 ZNF684Q5T5D7 378 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 WDR25Q64LD2 544 aaPredicted RBP5.04□□□□□ -1.6
CD44-225ENST00000527326 TMEM64Q6YI46 380 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 C19orf35Q6ZS72 473 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 LCNL1Q6ZST4 164 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 TCEAL8Q8IYN2 117 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 ZNF683Q8IZ20 524 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 OR8I2Q8N0Y5 310 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 Q8N976 141 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 MRPL43Q8N983 215 aaKnown RBP5.04□□□□□ -1.6
CD44-225ENST00000527326 OR10G3Q8NGC4 313 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 OR5A1Q8NGJ0 315 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 SLC25A40Q8TBP6 338 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 TMEM255BQ8WV15 326 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 RAB1CQ92928 201 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 EMG1Q92979 244 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms