RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 MRPS10P82664 201 aaKnown RBP2.7□□□□□ -1.98
CD44-217ENST00000525348 RHOGP84095 191 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 PPP1R8Q12972 351 aaKnown RBP2.7□□□□□ -1.98
CD44-217ENST00000525348 CLINT1Q14677 625 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 QPRTQ15274 297 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 OR1Q1Q15612 314 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 ZNF77Q15935 545 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 C6orf226Q5I0X4 101 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 STEAP4Q687X5 459 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 WDR82Q6UXN9 313 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 APOOLQ6UXV4 268 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 HACD2Q6Y1H2 254 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 TMPPEQ6ZT21 453 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 RASSF6Q6ZTQ3 369 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 OLIG3Q7RTU3 272 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 ZNF720Q7Z2F6 126 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 SLC36A1Q7Z2H8 476 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 DEFB128Q7Z7B8 93 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 CBLN2Q8IUK8 224 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 ZNF683Q8IZ20 524 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 CEND1Q8N111 149 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 OR10A6Q8NH74 314 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 LINC01006Q8NI28 216 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 LGALS14Q8TCE9 139 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 GPR119Q8TDV5 335 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 CASTOR1Q8WTX7 329 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 TFB1MQ8WVM0 346 aaKnown RBP2.7□□□□□ -1.98
CD44-217ENST00000525348 FCGR1BQ92637 280 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 FAM131CQ96AQ9 280 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 CXorf40BQ96DE9 158 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 MRAP2Q96G30 205 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 REEP6Q96HR9 211 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 JSRP1Q96MG2 331 aaPredicted RBP2.7□□□□□ -1.98
CD44-217ENST00000525348 OR5B12Q96R08 314 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 OR7D2Q96RA2 312 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 IL4I1Q96RQ9 567 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 FMO2Q99518 471 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 P2RX4Q99571 388 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 RIOK2Q9BVS4 552 aaKnown RBP2.7□□□□□ -1.98
CD44-217ENST00000525348 CDCA4Q9BXL8 241 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 DUSP16Q9BY84 665 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 RAB34Q9BZG1 259 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 NMNAT2Q9BZQ4 307 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 ELOVL3Q9HB03 270 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 TMEM27Q9HBJ8 222 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 TMEM38BQ9NVV0 291 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 DMAC2Q9NW81 257 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 TAS2R13Q9NYV9 303 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 ZNF230Q9UIE0 474 aaPredicted RBP2.7□□□□□ -1.98
CD44-217ENST00000525348 RIMS3Q9UJD0 308 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 NPIPA1Q9UND3 350 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 TNFSF18Q9UNG2 199 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 TFR2Q9UP52 801 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 PDE10AQ9Y233 779 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 FOXA2Q9Y261 457 aaPredicted RBP2.7□□□□□ -1.98
CD44-217ENST00000525348 ST3GAL6Q9Y274 331 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 FARSAQ9Y285 508 aaKnown RBP2.7□□□□□ -1.98
CD44-217ENST00000525348 PPIAL4AQ9Y536 164 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 CDH10Q9Y6N8 788 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 CICQ96RK0 1608 aaPredicted RBP2.7□□□□□ -1.98
CD44-217ENST00000525348 TRIP11Q15643 1979 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 ROBO3Q96MS0 1386 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 QRICH2Q9H0J4 1663 aa2.69□□□□□ -1.98
CD44-217ENST00000525348 GOLGB1Q14789 3259 aaKnown RBP2.69□□□□□ -1.98
CD44-217ENST00000525348 USP6P35125 1406 aa2.69□□□□□ -1.98
CD44-217ENST00000525348 SLIT3O75094 1523 aa2.69□□□□□ -1.98
CD44-217ENST00000525348 LY75O60449 1722 aa2.69□□□□□ -1.98
CD44-217ENST00000525348 A0A087WX48 190 aa2.69□□□□□ -1.98
CD44-217ENST00000525348 A0A0A6YYD4 124 aa2.69□□□□□ -1.98
CD44-217ENST00000525348 A0A1W2PP18 115 aa2.69□□□□□ -1.98
CD44-217ENST00000525348 TVP23AA6NH52 213 aa2.69□□□□□ -1.98
CD44-217ENST00000525348 ZFP92A6NM28 416 aa2.69□□□□□ -1.98
CD44-217ENST00000525348 DHRS7CA6NNS2 312 aa2.69□□□□□ -1.98
CD44-217ENST00000525348 YJEFN3A6XGL0 299 aa2.69□□□□□ -1.98
CD44-217ENST00000525348 ANKRD30BLA7E2S9 258 aa2.69□□□□□ -1.98
CD44-217ENST00000525348 G3V4G9 280 aa2.69□□□□□ -1.98
CD44-217ENST00000525348 J3QLI3 93 aa2.69□□□□□ -1.98
CD44-217ENST00000525348 K7EN84 100 aa2.69□□□□□ -1.98
CD44-217ENST00000525348 FAAHO00519 579 aa2.69□□□□□ -1.98
CD44-217ENST00000525348 EI24O14681 340 aa2.69□□□□□ -1.98
CD44-217ENST00000525348 PDE6DO43924 150 aa2.69□□□□□ -1.98
CD44-217ENST00000525348 TPST1O60507 370 aa2.69□□□□□ -1.98
CD44-217ENST00000525348 LRATO95237 230 aa2.69□□□□□ -1.98
CD44-217ENST00000525348 ALDOBP05062 364 aa2.69□□□□□ -1.98
CD44-217ENST00000525348 CYBAP13498 195 aa2.69□□□□□ -1.98
CD44-217ENST00000525348 UGT2B7P16662 529 aa2.69□□□□□ -1.98
CD44-217ENST00000525348 ZNF17P17021 662 aa2.69□□□□□ -1.98
CD44-217ENST00000525348 IDSP22304 550 aa2.69□□□□□ -1.98
CD44-217ENST00000525348 RPS3P23396 243 aaKnown RBP eCLIP2.69□□□□□ -1.98
CD44-217ENST00000525348 IVDP26440 423 aa2.69□□□□□ -1.98
CD44-217ENST00000525348 HMGB2P26583 209 aaKnown RBP2.69□□□□□ -1.98
CD44-217ENST00000525348 AK4P27144 223 aaPredicted RBP2.69□□□□□ -1.98
CD44-217ENST00000525348 HTR2CP28335 458 aa2.69□□□□□ -1.98
CD44-217ENST00000525348 S100GP29377 79 aa2.69□□□□□ -1.98
CD44-217ENST00000525348 PRDX2P32119 198 aa2.69□□□□□ -1.98
CD44-217ENST00000525348 SLC6A8P48029 635 aa2.69□□□□□ -1.98
CD44-217ENST00000525348 PRLHRP49683 370 aa2.69□□□□□ -1.98
CD44-217ENST00000525348 DUSP3P51452 185 aaPredicted RBP2.69□□□□□ -1.98
CD44-217ENST00000525348 BIDP55957 195 aa2.69□□□□□ -1.98
CD44-217ENST00000525348 RAB25P57735 213 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms