RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 CCDC88AQ3V6T2 1871 aa12.14□□□□□ -0.47
LRRK1-202ENST00000525284 TFPI2P48307 235 aa12.14□□□□□ -0.47
LRRK1-202ENST00000525284 WDR25Q64LD2 544 aaPredicted RBP12.14□□□□□ -0.47
LRRK1-202ENST00000525284 CES1P1Q9UKY3 287 aa12.14□□□□□ -0.47
LRRK1-202ENST00000525284 CCL26Q9Y258 94 aa12.14□□□□□ -0.47
LRRK1-202ENST00000525284 ID1P41134 155 aa12.14□□□□□ -0.47
LRRK1-202ENST00000525284 P2RY1P47900 373 aa12.14□□□□□ -0.47
LRRK1-202ENST00000525284 OTOSQ8NHW6 89 aa12.14□□□□□ -0.47
LRRK1-202ENST00000525284 NPFFR1Q9GZQ6 430 aa12.14□□□□□ -0.47
LRRK1-202ENST00000525284 TREM2Q9NZC2 230 aa12.14□□□□□ -0.47
LRRK1-202ENST00000525284 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.13□□□□□ -0.47
LRRK1-202ENST00000525284 TMEM189A5PLL7 270 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 METTL12A8MUP2 240 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 TMEM189-UBE2V1I3L0A0 370 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 ABLIM3O94929 683 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 CKS2P33552 79 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 ZNF600Q6ZNG1 722 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 K7ESM1 405 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 HBZP02008 142 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 TNFAIP6P98066 277 aaPredicted RBP12.13□□□□□ -0.47
LRRK1-202ENST00000525284 C2orf83Q53S99 150 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 NSUN5P2Q63ZY6 315 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 ASB16Q96NS5 453 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 KLK15Q9H2R5 256 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 FAM206AQ9NX38 181 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 PPM1DO15297 605 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 CCL2P13500 99 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 FAM74A3Q4VXF1 159 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 WDR38Q5JTN6 314 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 JMJD6Q6NYC1 403 aaPredicted RBP12.13□□□□□ -0.47
LRRK1-202ENST00000525284 COPS9Q8WXC6 57 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 AQP10Q96PS8 301 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 MFAP4P55083 255 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 TCTN3Q6NUS6 607 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 FAM219AQ8IW50 185 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 CHRNA10Q9GZZ6 450 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 WNT5BQ9H1J7 359 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 SLC25A37Q9NYZ2 338 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 UQCR10Q9UDW1 63 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 TBC1D29Q9UFV1 150 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 HS3ST2Q9Y278 367 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 CGB1A6NKQ9 187 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 CXorf1O96002 111 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 TGFAP01135 160 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 FCGR3AP08637 254 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 ZNF250P15622 560 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 CDX1P47902 265 aaPredicted RBP12.13□□□□□ -0.47
LRRK1-202ENST00000525284 MRPS11P82912 194 aaKnown RBP12.13□□□□□ -0.47
LRRK1-202ENST00000525284 SLC25A34Q6PIV7 304 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 PATE1Q8WXA2 126 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 CDC42EP3Q9UKI2 254 aa12.13□□□□□ -0.47
LRRK1-202ENST00000525284 CITO14578 2027 aa12.12□□□□□ -0.47
LRRK1-202ENST00000525284 ALG1L2C9J202 215 aa12.12□□□□□ -0.47
LRRK1-202ENST00000525284 CTAG2O75638 210 aa12.12□□□□□ -0.47
LRRK1-202ENST00000525284 B4GALNT1Q00973 533 aa12.12□□□□□ -0.47
LRRK1-202ENST00000525284 PSMG3Q9BT73 122 aaPredicted RBP12.12□□□□□ -0.47
LRRK1-202ENST00000525284 MTFP1Q9UDX5 166 aa12.12□□□□□ -0.47
LRRK1-202ENST00000525284 CHD4Q14839 1912 aa12.12□□□□□ -0.47
LRRK1-202ENST00000525284 A0A087WUJ7 227 aa12.12□□□□□ -0.47
LRRK1-202ENST00000525284 CXorf65A6NEN9 183 aa12.12□□□□□ -0.47
LRRK1-202ENST00000525284 F12P00748 615 aaPredicted RBP12.12□□□□□ -0.47
LRRK1-202ENST00000525284 KIRREL2Q6UWL6 708 aa12.12□□□□□ -0.47
LRRK1-202ENST00000525284 MRPL43Q8N983 215 aaKnown RBP12.12□□□□□ -0.47
LRRK1-202ENST00000525284 ST6GALNAC3Q8NDV1 305 aa12.12□□□□□ -0.47
LRRK1-202ENST00000525284 GPR27Q9NS67 375 aa12.12□□□□□ -0.47
LRRK1-202ENST00000525284 MYH11P35749 1972 aa12.12□□□□□ -0.47
LRRK1-202ENST00000525284 GPR3P46089 330 aa12.12□□□□□ -0.47
LRRK1-202ENST00000525284 SGMS2Q8NHU3 365 aa12.12□□□□□ -0.47
LRRK1-202ENST00000525284 GLRX2Q9NS18 164 aa12.12□□□□□ -0.47
LRRK1-202ENST00000525284 PHLPP1O60346 1717 aa12.12□□□□□ -0.47
LRRK1-202ENST00000525284 H0Y8X5 98 aa12.12□□□□□ -0.47
LRRK1-202ENST00000525284 CDS2O95674 445 aa12.12□□□□□ -0.47
LRRK1-202ENST00000525284 LRRC75BQ2VPJ9 315 aa12.12□□□□□ -0.47
LRRK1-202ENST00000525284 OR8G5Q8NG78 346 aa12.12□□□□□ -0.47
LRRK1-202ENST00000525284 OR10S1Q8NGN2 331 aa12.12□□□□□ -0.47
LRRK1-202ENST00000525284 OR4B1Q8NGF8 309 aa12.12□□□□□ -0.47
LRRK1-202ENST00000525284 MRPL30Q8TCC3 161 aaKnown RBP12.12□□□□□ -0.47
LRRK1-202ENST00000525284 WNT16Q9UBV4 365 aa12.12□□□□□ -0.47
LRRK1-202ENST00000525284 TRBV23-1A0A0A0MS06 115 aa12.11□□□□□ -0.47
LRRK1-202ENST00000525284 PMELP40967 661 aa12.11□□□□□ -0.47
LRRK1-202ENST00000525284 ATOH7Q8N100 152 aa12.11□□□□□ -0.47
LRRK1-202ENST00000525284 HDGFL3Q9Y3E1 203 aa12.11□□□□□ -0.47
LRRK1-202ENST00000525284 PHRF1Q9P1Y6 1649 aaKnown RBP12.11□□□□□ -0.47
LRRK1-202ENST00000525284 ECSCRQ19T08 205 aa12.11□□□□□ -0.47
LRRK1-202ENST00000525284 METRNLQ641Q3 311 aa12.11□□□□□ -0.47
LRRK1-202ENST00000525284 FRG2CA6NGY1 282 aa12.11□□□□□ -0.47
LRRK1-202ENST00000525284 TNFSF15O95150 251 aa12.11□□□□□ -0.47
LRRK1-202ENST00000525284 SMIM13P0DJ93 91 aa12.11□□□□□ -0.47
LRRK1-202ENST00000525284 EPHA8P29322 1005 aaPredicted RBP12.11□□□□□ -0.47
LRRK1-202ENST00000525284 RTP5Q14D33 572 aa12.11□□□□□ -0.47
LRRK1-202ENST00000525284 OR1K1Q8NGR3 316 aa12.11□□□□□ -0.47
LRRK1-202ENST00000525284 DOK1Q99704 481 aa12.11□□□□□ -0.47
LRRK1-202ENST00000525284 HCFC2Q9Y5Z7 792 aa12.11□□□□□ -0.47
LRRK1-202ENST00000525284 HMSDA8MTL9 139 aa12.11□□□□□ -0.47
LRRK1-202ENST00000525284 EPPINO95925 133 aa12.11□□□□□ -0.47
LRRK1-202ENST00000525284 MGAT2Q10469 447 aa12.11□□□□□ -0.47
LRRK1-202ENST00000525284 MRGPRGQ86SM5 289 aa12.11□□□□□ -0.47
LRRK1-202ENST00000525284 RCC2Q9P258 522 aaKnown RBP12.11□□□□□ -0.47
LRRK1-202ENST00000525284 TARM1B6A8C7 271 aa12.11□□□□□ -0.47
LRRK1-202ENST00000525284 UPK1AO00322 258 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms