RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 MOB4Q9Y3A3 225 aa7.46□□□□□ -1.22
SDC2-207ENST00000522911 HSPE1-MOB4S4R3N1 261 aa7.46□□□□□ -1.22
SDC2-207ENST00000522911 A0A1W2PRX2 142 aa7.45□□□□□ -1.22
SDC2-207ENST00000522911 MEX3AA1L020 520 aaKnown RBP7.45□□□□□ -1.22
SDC2-207ENST00000522911 G3V2T6 193 aa7.45□□□□□ -1.22
SDC2-207ENST00000522911 RPP14O95059 124 aaKnown RBP7.45□□□□□ -1.22
SDC2-207ENST00000522911 NHLRC4P0CG21 123 aaPredicted RBP7.45□□□□□ -1.22
SDC2-207ENST00000522911 FAM106CPP0CH98 169 aa7.45□□□□□ -1.22
SDC2-207ENST00000522911 PRKACAP17612 351 aa7.45□□□□□ -1.22
SDC2-207ENST00000522911 ATF1P18846 271 aa7.45□□□□□ -1.22
SDC2-207ENST00000522911 BCL3P20749 454 aa7.45□□□□□ -1.22
SDC2-207ENST00000522911 PTGFRP43088 359 aa7.45□□□□□ -1.22
SDC2-207ENST00000522911 KIR3DL2P43630 455 aa7.45□□□□□ -1.22
SDC2-207ENST00000522911 ALDH3B2P48448 385 aa7.45□□□□□ -1.22
SDC2-207ENST00000522911 SLC25A30Q5SVS4 291 aa7.45□□□□□ -1.22
SDC2-207ENST00000522911 ELP2Q6IA86 826 aa7.45□□□□□ -1.22
SDC2-207ENST00000522911 Q6P435 159 aa7.45□□□□□ -1.22
SDC2-207ENST00000522911 TRAPPC6BQ86SZ2 158 aa7.45□□□□□ -1.22
SDC2-207ENST00000522911 ZDHHC13Q8IUH4 622 aa7.45□□□□□ -1.22
SDC2-207ENST00000522911 MRPL41Q8IXM3 137 aaKnown RBP7.45□□□□□ -1.22
SDC2-207ENST00000522911 OR10A7Q8NGE5 316 aa7.45□□□□□ -1.22
SDC2-207ENST00000522911 OR4D6Q8NGJ1 314 aa7.45□□□□□ -1.22
SDC2-207ENST00000522911 OR51T1Q8NGJ9 327 aa7.45□□□□□ -1.22
SDC2-207ENST00000522911 OR2G2Q8NGZ5 317 aa7.45□□□□□ -1.22
SDC2-207ENST00000522911 OR9G1Q8NH87 305 aa7.45□□□□□ -1.22
SDC2-207ENST00000522911 TRUB1Q8WWH5 349 aaKnown RBP7.45□□□□□ -1.22
SDC2-207ENST00000522911 DPF1Q92782 380 aa7.45□□□□□ -1.22
SDC2-207ENST00000522911 RFKQ969G6 155 aa7.45□□□□□ -1.22
SDC2-207ENST00000522911 ADAT3Q96EY9 351 aaPredicted RBP7.45□□□□□ -1.22
SDC2-207ENST00000522911 COQ2Q96H96 371 aa7.45□□□□□ -1.22
SDC2-207ENST00000522911 OPALINQ96PE5 141 aa7.45□□□□□ -1.22
SDC2-207ENST00000522911 P2RX4Q99571 388 aa7.45□□□□□ -1.22
SDC2-207ENST00000522911 GABARAPL3Q9BY60 117 aa7.45□□□□□ -1.22
SDC2-207ENST00000522911 RBM38Q9H0Z9 239 aaKnown RBP7.45□□□□□ -1.22
SDC2-207ENST00000522911 ZNF286AQ9HBT8 521 aa7.45□□□□□ -1.22
SDC2-207ENST00000522911 NEK6Q9HC98 313 aa7.45□□□□□ -1.22
SDC2-207ENST00000522911 AMMECR1Q9Y4X0 333 aaPredicted RBP7.45□□□□□ -1.22
SDC2-207ENST00000522911 IGKV1-12A0A0C4DH73 117 aa7.44□□□□□ -1.22
SDC2-207ENST00000522911 KBTBD11-OT1A0A1B0GTJ5 212 aa7.44□□□□□ -1.22
SDC2-207ENST00000522911 PSMB11A5LHX3 300 aa7.44□□□□□ -1.22
SDC2-207ENST00000522911 NPIPB11E5RHQ5 1161 aa7.44□□□□□ -1.22
SDC2-207ENST00000522911 J3QRE1 110 aa7.44□□□□□ -1.22
SDC2-207ENST00000522911 TOR1AO14656 332 aa7.44□□□□□ -1.22
SDC2-207ENST00000522911 NOL3O60936 208 aaKnown RBP7.44□□□□□ -1.22
SDC2-207ENST00000522911 IGKV1D-12P01611 117 aa7.44□□□□□ -1.22
SDC2-207ENST00000522911 IGHG2P01859 326 aa7.44□□□□□ -1.22
SDC2-207ENST00000522911 MYF6P23409 242 aa7.44□□□□□ -1.22
SDC2-207ENST00000522911 DUSP1P28562 367 aa7.44□□□□□ -1.22
SDC2-207ENST00000522911 MYCNOSP40205 109 aa7.44□□□□□ -1.22
SDC2-207ENST00000522911 GLIPR1P48060 266 aa7.44□□□□□ -1.22
SDC2-207ENST00000522911 KCNJ3P48549 501 aa7.44□□□□□ -1.22
SDC2-207ENST00000522911 RAB7AP51149 207 aa7.44□□□□□ -1.22
SDC2-207ENST00000522911 RPL23AP62750 156 aaKnown RBP7.44□□□□□ -1.22
SDC2-207ENST00000522911 AESQ08117 197 aa7.44□□□□□ -1.22
SDC2-207ENST00000522911 EBI3Q14213 229 aa7.44□□□□□ -1.22
SDC2-207ENST00000522911 CDK5R1Q15078 307 aa7.44□□□□□ -1.22
SDC2-207ENST00000522911 C17orf58Q2M2W7 97 aa7.44□□□□□ -1.22
SDC2-207ENST00000522911 PRAMEF5Q5TYX0 476 aa7.44□□□□□ -1.22
SDC2-207ENST00000522911 C11orf87Q6NUJ2 197 aa7.44□□□□□ -1.22
SDC2-207ENST00000522911 OR2W3Q7Z3T1 314 aa7.44□□□□□ -1.22
SDC2-207ENST00000522911 FAM220AQ7Z4H9 259 aa7.44□□□□□ -1.22
SDC2-207ENST00000522911 GPR141Q7Z602 305 aa7.44□□□□□ -1.22
SDC2-207ENST00000522911 OR8H3Q8N146 312 aa7.44□□□□□ -1.22
SDC2-207ENST00000522911 RNF152Q8N8N0 203 aa7.44□□□□□ -1.22
SDC2-207ENST00000522911 ZNF565Q8N9K5 539 aa7.44□□□□□ -1.22
SDC2-207ENST00000522911 Q8NFD4 153 aa7.44□□□□□ -1.22
SDC2-207ENST00000522911 TFAP2CQ92754 450 aa7.44□□□□□ -1.22
SDC2-207ENST00000522911 CENPNQ96H22 339 aaPredicted RBP7.44□□□□□ -1.22
SDC2-207ENST00000522911 KIRREL1Q96J84 757 aa7.44□□□□□ -1.22
SDC2-207ENST00000522911 FAM210AQ96ND0 272 aa7.44□□□□□ -1.22
SDC2-207ENST00000522911 FRRS1LQ9P0K9 344 aa7.44□□□□□ -1.22
SDC2-207ENST00000522911 CEPT1Q9Y6K0 416 aa7.44□□□□□ -1.22
SDC2-207ENST00000522911 STAB2Q8WWQ8 2551 aa7.44□□□□□ -1.22
SDC2-207ENST00000522911 A0A1W2PPI3 338 aa7.43□□□□□ -1.22
SDC2-207ENST00000522911 TRIM64CA6NLI5 447 aa7.43□□□□□ -1.22
SDC2-207ENST00000522911 M0R129 80 aa7.43□□□□□ -1.22
SDC2-207ENST00000522911 SIRPB1O00241 398 aa7.43□□□□□ -1.22
SDC2-207ENST00000522911 SLC33A1O00400 549 aaPredicted RBP7.43□□□□□ -1.22
SDC2-207ENST00000522911 RAMP3O60896 148 aa7.43□□□□□ -1.22
SDC2-207ENST00000522911 MITFO75030 526 aaPredicted RBP7.43□□□□□ -1.22
SDC2-207ENST00000522911 ZFPL1O95159 310 aa7.43□□□□□ -1.22
SDC2-207ENST00000522911 DBTP11182 482 aaKnown RBP7.43□□□□□ -1.22
SDC2-207ENST00000522911 CD24P25063 80 aa7.43□□□□□ -1.22
SDC2-207ENST00000522911 GDNFP39905 211 aa7.43□□□□□ -1.22
SDC2-207ENST00000522911 MTNR1BP49286 362 aa7.43□□□□□ -1.22
SDC2-207ENST00000522911 POU3F4P49335 361 aa7.43□□□□□ -1.22
SDC2-207ENST00000522911 ZP1P60852 638 aa7.43□□□□□ -1.22
SDC2-207ENST00000522911 ZNF85Q03923 595 aa7.43□□□□□ -1.22
SDC2-207ENST00000522911 CD69Q07108 199 aa7.43□□□□□ -1.22
SDC2-207ENST00000522911 ODF4Q2M2E3 257 aa7.43□□□□□ -1.22
SDC2-207ENST00000522911 KRBOX4Q5JUW0 171 aa7.43□□□□□ -1.22
SDC2-207ENST00000522911 C10orf99Q6UWK7 81 aa7.43□□□□□ -1.22
SDC2-207ENST00000522911 BAIAP2L2Q6UXY1 529 aa7.43□□□□□ -1.22
SDC2-207ENST00000522911 C5orf56Q8N8D9 126 aa7.43□□□□□ -1.22
SDC2-207ENST00000522911 PXT1Q8NFP0 134 aa7.43□□□□□ -1.22
SDC2-207ENST00000522911 OR10H4Q8NGA5 316 aa7.43□□□□□ -1.22
SDC2-207ENST00000522911 HAVCR2Q8TDQ0 301 aa7.43□□□□□ -1.22
SDC2-207ENST00000522911 FGGYQ96C11 551 aa7.43□□□□□ -1.22
SDC2-207ENST00000522911 RDH12Q96NR8 316 aa7.43□□□□□ -1.22
SDC2-207ENST00000522911 CIB1Q99828 191 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms