RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 DHRS9Q9BPW9 319 aa12.98□□□□□ -0.33
CTNNA1-236ENST00000522792 TMEM204Q9BSN7 226 aa12.98□□□□□ -0.33
CTNNA1-236ENST00000522792 OR51J1Q9H342 316 aa12.98□□□□□ -0.33
CTNNA1-236ENST00000522792 DECR2Q9NUI1 292 aa12.98□□□□□ -0.33
CTNNA1-236ENST00000522792 RASL12Q9NYN1 266 aa12.98□□□□□ -0.33
CTNNA1-236ENST00000522792 RNF7Q9UBF6 113 aa12.98□□□□□ -0.33
CTNNA1-236ENST00000522792 RALYQ9UKM9 306 aaKnown RBP12.98□□□□□ -0.33
CTNNA1-236ENST00000522792 PPP1R3CQ9UQK1 317 aa12.98□□□□□ -0.33
CTNNA1-236ENST00000522792 TRAV39A0A0B4J263 110 aa12.97□□□□□ -0.33
CTNNA1-236ENST00000522792 B9A039 149 aa12.97□□□□□ -0.33
CTNNA1-236ENST00000522792 CCNKO75909 580 aa12.97□□□□□ -0.33
CTNNA1-236ENST00000522792 C1QL1O75973 258 aa12.97□□□□□ -0.33
CTNNA1-236ENST00000522792 LHBP01229 141 aa12.97□□□□□ -0.33
CTNNA1-236ENST00000522792 CD55P08174 381 aa12.97□□□□□ -0.33
CTNNA1-236ENST00000522792 ADH4P08319 380 aa12.97□□□□□ -0.33
CTNNA1-236ENST00000522792 PSG2P11465 335 aa12.97□□□□□ -0.33
CTNNA1-236ENST00000522792 EFNB3Q15768 340 aa12.97□□□□□ -0.33
CTNNA1-236ENST00000522792 SLC36A1Q7Z2H8 476 aa12.97□□□□□ -0.33
CTNNA1-236ENST00000522792 TMEM17Q86X19 198 aa12.97□□□□□ -0.33
CTNNA1-236ENST00000522792 MUC15Q8N387 334 aa12.97□□□□□ -0.33
CTNNA1-236ENST00000522792 TERB2Q8NHR7 220 aa12.97□□□□□ -0.33
CTNNA1-236ENST00000522792 CAPSLQ8WWF8 208 aa12.97□□□□□ -0.33
CTNNA1-236ENST00000522792 TMPRSS13Q9BYE2 586 aa12.97□□□□□ -0.33
CTNNA1-236ENST00000522792 NECAP2Q9NVZ3 263 aa12.97□□□□□ -0.33
CTNNA1-236ENST00000522792 OR5H8P0DN80 308 aa12.96□□□□□ -0.33
CTNNA1-236ENST00000522792 TNFRSF1AP19438 455 aa12.96□□□□□ -0.33
CTNNA1-236ENST00000522792 PRDX2P32119 198 aa12.96□□□□□ -0.33
CTNNA1-236ENST00000522792 GABRA2P47869 451 aa12.96□□□□□ -0.33
CTNNA1-236ENST00000522792 MECP2P51608 486 aaKnown RBP12.96□□□□□ -0.33
CTNNA1-236ENST00000522792 RRAS2P62070 204 aaPredicted RBP12.96□□□□□ -0.33
CTNNA1-236ENST00000522792 GLDNQ6ZMI3 551 aaPredicted RBP12.96□□□□□ -0.33
CTNNA1-236ENST00000522792 OR11L1Q8NGX0 322 aa12.96□□□□□ -0.33
CTNNA1-236ENST00000522792 ZNF2Q9BSG1 426 aaPredicted RBP12.96□□□□□ -0.33
CTNNA1-236ENST00000522792 SAP30LQ9HAJ7 183 aa12.96□□□□□ -0.33
CTNNA1-236ENST00000522792 NPTNQ9Y639 398 aa12.96□□□□□ -0.33
CTNNA1-236ENST00000522792 CACNA1DQ01668 2161 aa12.96□□□□□ -0.33
CTNNA1-236ENST00000522792 ANKHD1Q8IWZ3 2542 aaKnown RBP12.96□□□□□ -0.33
CTNNA1-236ENST00000522792 IGKV1D-17A0A075B6S4 117 aa12.96□□□□□ -0.34
CTNNA1-236ENST00000522792 PRAF2O60831 178 aa12.96□□□□□ -0.34
CTNNA1-236ENST00000522792 SCTP09683 121 aa12.96□□□□□ -0.34
CTNNA1-236ENST00000522792 RCC1P18754 421 aaPredicted RBP12.96□□□□□ -0.34
CTNNA1-236ENST00000522792 LMO1P25800 156 aa12.96□□□□□ -0.34
CTNNA1-236ENST00000522792 MDH2P40926 338 aaKnown RBP12.96□□□□□ -0.34
CTNNA1-236ENST00000522792 BAMBIQ13145 260 aa12.96□□□□□ -0.34
CTNNA1-236ENST00000522792 TESK1Q15569 626 aa12.96□□□□□ -0.34
CTNNA1-236ENST00000522792 IGSF11Q5DX21 431 aa12.96□□□□□ -0.34
CTNNA1-236ENST00000522792 AADACL3Q5VUY0 350 aa12.96□□□□□ -0.34
CTNNA1-236ENST00000522792 ZNF497Q6ZNH5 498 aa12.96□□□□□ -0.34
CTNNA1-236ENST00000522792 ASCC1Q8N9N2 400 aaKnown RBP12.96□□□□□ -0.34
CTNNA1-236ENST00000522792 ZBTB8BQ8NAP8 495 aaPredicted RBP12.96□□□□□ -0.34
CTNNA1-236ENST00000522792 OR6F1Q8NGZ6 308 aa12.96□□□□□ -0.34
CTNNA1-236ENST00000522792 EGLN1Q9GZT9 426 aa12.96□□□□□ -0.34
CTNNA1-236ENST00000522792 LIME1Q9H400 295 aa12.96□□□□□ -0.34
CTNNA1-236ENST00000522792 RIMS4Q9H426 269 aaPredicted RBP12.96□□□□□ -0.34
CTNNA1-236ENST00000522792 ZNF69Q9UC07 566 aa12.96□□□□□ -0.34
CTNNA1-236ENST00000522792 OR5H14A6NHG9 310 aa12.95□□□□□ -0.34
CTNNA1-236ENST00000522792 SSNA1O43805 119 aa12.95□□□□□ -0.34
CTNNA1-236ENST00000522792 ROS1P08922 2347 aa12.95□□□□□ -0.34
CTNNA1-236ENST00000522792 IRF2P14316 349 aa12.95□□□□□ -0.34
CTNNA1-236ENST00000522792 GRK1Q15835 563 aa12.95□□□□□ -0.34
CTNNA1-236ENST00000522792 C4orf46Q504U0 113 aa12.95□□□□□ -0.34
CTNNA1-236ENST00000522792 FAM209AQ5JX71 171 aa12.95□□□□□ -0.34
CTNNA1-236ENST00000522792 METTL11BQ5VVY1 283 aa12.95□□□□□ -0.34
CTNNA1-236ENST00000522792 SHEQ5VZ18 495 aa12.95□□□□□ -0.34
CTNNA1-236ENST00000522792 LHFPL1Q86WI0 220 aa12.95□□□□□ -0.34
CTNNA1-236ENST00000522792 DEFB108BQ8NET1 73 aa12.95□□□□□ -0.34
CTNNA1-236ENST00000522792 Q8TCH9 128 aa12.95□□□□□ -0.34
CTNNA1-236ENST00000522792 ERGIC1Q969X5 290 aa12.95□□□□□ -0.34
CTNNA1-236ENST00000522792 MED28Q9H204 178 aa12.95□□□□□ -0.34
CTNNA1-236ENST00000522792 MS4A5Q9H3V2 200 aa12.95□□□□□ -0.34
CTNNA1-236ENST00000522792 TRDCB7Z8K6 153 aa12.95□□□□□ -0.34
CTNNA1-236ENST00000522792 FABP7O15540 132 aa12.95□□□□□ -0.34
CTNNA1-236ENST00000522792 IL5P05113 134 aa12.95□□□□□ -0.34
CTNNA1-236ENST00000522792 PI3P19957 117 aa12.95□□□□□ -0.34
CTNNA1-236ENST00000522792 OR3A1P47881 315 aa12.95□□□□□ -0.34
CTNNA1-236ENST00000522792 CD83Q01151 205 aa12.95□□□□□ -0.34
CTNNA1-236ENST00000522792 AESQ08117 197 aa12.95□□□□□ -0.34
CTNNA1-236ENST00000522792 FCN2Q15485 313 aa12.95□□□□□ -0.34
CTNNA1-236ENST00000522792 SWI5Q1ZZU3 235 aa12.95□□□□□ -0.34
CTNNA1-236ENST00000522792 ZDHHC22Q8N966 263 aa12.95□□□□□ -0.34
CTNNA1-236ENST00000522792 ADAD2Q8NCV1 583 aaKnown RBP12.95□□□□□ -0.34
CTNNA1-236ENST00000522792 ZNF221Q9UK13 617 aa12.95□□□□□ -0.34
CTNNA1-236ENST00000522792 TRAPPC2LQ9UL33 140 aa12.95□□□□□ -0.34
CTNNA1-236ENST00000522792 ZFYVE26Q68DK2 2539 aa12.94□□□□□ -0.34
CTNNA1-236ENST00000522792 TRBV6-6A0A0A6YYG2 114 aa12.94□□□□□ -0.34
CTNNA1-236ENST00000522792 IFNL4K9M1U5 179 aa12.94□□□□□ -0.34
CTNNA1-236ENST00000522792 TRAPPC2P0DI81 140 aa12.94□□□□□ -0.34
CTNNA1-236ENST00000522792 TRAPPC2BP0DI82 140 aa12.94□□□□□ -0.34
CTNNA1-236ENST00000522792 SEC61A1P61619 476 aaKnown RBP12.94□□□□□ -0.34
CTNNA1-236ENST00000522792 SNRPD2P62316 118 aaKnown RBP12.94□□□□□ -0.34
CTNNA1-236ENST00000522792 ZNF880Q6PDB4 577 aa12.94□□□□□ -0.34
CTNNA1-236ENST00000522792 Q6ZS49 121 aa12.94□□□□□ -0.34
CTNNA1-236ENST00000522792 FAM90A1Q86YD7 464 aa12.94□□□□□ -0.34
CTNNA1-236ENST00000522792 VRK1Q99986 396 aaPredicted RBP12.94□□□□□ -0.34
CTNNA1-236ENST00000522792 GPN1Q9HCN4 374 aaPredicted RBP12.94□□□□□ -0.34
CTNNA1-236ENST00000522792 KIR2DS1A0A191URI9 304 aa12.93□□□□□ -0.34
CTNNA1-236ENST00000522792 BET1O15155 118 aa12.93□□□□□ -0.34
CTNNA1-236ENST00000522792 OR4E1P0C645 316 aa12.93□□□□□ -0.34
CTNNA1-236ENST00000522792 RNF224P0DH78 156 aa12.93□□□□□ -0.34
CTNNA1-236ENST00000522792 NFYAP23511 347 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms