RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 KIF25Q9UIL4 384 aa16.59■□□□□ 0.25
SDCBP-209ENST00000522243 MEIKINA0A087WXM9 373 aa16.58■□□□□ 0.24
SDCBP-209ENST00000522243 CDRT1O95170 752 aa16.58■□□□□ 0.24
SDCBP-209ENST00000522243 IGHV3-7P01780 117 aa16.58■□□□□ 0.24
SDCBP-209ENST00000522243 CD2P06729 351 aa16.58■□□□□ 0.24
SDCBP-209ENST00000522243 BRS3P32247 399 aa16.58■□□□□ 0.24
SDCBP-209ENST00000522243 OR3A4PP47883 348 aa16.58■□□□□ 0.24
SDCBP-209ENST00000522243 RSU1Q15404 277 aa16.58■□□□□ 0.24
SDCBP-209ENST00000522243 HLA-DRB5Q30154 266 aa16.58■□□□□ 0.24
SDCBP-209ENST00000522243 PIGYQ3MUY2 71 aa16.58■□□□□ 0.24
SDCBP-209ENST00000522243 CCDC58Q4VC31 144 aa16.58■□□□□ 0.24
SDCBP-209ENST00000522243 TMPRSS11AQ6ZMR5 421 aa16.58■□□□□ 0.24
SDCBP-209ENST00000522243 OR51T1Q8NGJ9 327 aa16.58■□□□□ 0.24
SDCBP-209ENST00000522243 OR13A1Q8NGR1 328 aa16.58■□□□□ 0.24
SDCBP-209ENST00000522243 OR13C5Q8NGS8 318 aa16.58■□□□□ 0.24
SDCBP-209ENST00000522243 CYGBQ8WWM9 190 aa16.58■□□□□ 0.24
SDCBP-209ENST00000522243 TMEM106AQ96A25 262 aa16.58■□□□□ 0.24
SDCBP-209ENST00000522243 CPNE2Q96FN4 548 aaPredicted RBP16.58■□□□□ 0.24
SDCBP-209ENST00000522243 RDH12Q96NR8 316 aa16.58■□□□□ 0.24
SDCBP-209ENST00000522243 CITED2Q99967 270 aaPredicted RBP16.58■□□□□ 0.24
SDCBP-209ENST00000522243 WNT10AQ9GZT5 417 aa16.58■□□□□ 0.24
SDCBP-209ENST00000522243 CLEC2DQ9UHP7 191 aa16.58■□□□□ 0.24
SDCBP-209ENST00000522243 ING4Q9UNL4 249 aa16.58■□□□□ 0.24
SDCBP-209ENST00000522243 PLXNB1O43157 2135 aa16.57■□□□□ 0.24
SDCBP-209ENST00000522243 BUB1B-PAK6H3BSN5 160 aa16.57■□□□□ 0.24
SDCBP-209ENST00000522243 H3BUI4 141 aa16.57■□□□□ 0.24
SDCBP-209ENST00000522243 LALBAP00709 142 aa16.57■□□□□ 0.24
SDCBP-209ENST00000522243 CGB3P0DN86 165 aa16.57■□□□□ 0.24
SDCBP-209ENST00000522243 CGB7P0DN87 165 aa16.57■□□□□ 0.24
SDCBP-209ENST00000522243 PRRX1P54821 245 aa16.57■□□□□ 0.24
SDCBP-209ENST00000522243 IL13RA2Q14627 380 aa16.57■□□□□ 0.24
SDCBP-209ENST00000522243 LTC4SQ16873 150 aa16.57■□□□□ 0.24
SDCBP-209ENST00000522243 TPTE2P1Q5T6R2 138 aa16.57■□□□□ 0.24
SDCBP-209ENST00000522243 PLPPR1Q8TBJ4 325 aa16.57■□□□□ 0.24
SDCBP-209ENST00000522243 WIPF2Q8TF74 440 aaPredicted RBP16.57■□□□□ 0.24
SDCBP-209ENST00000522243 OCSTAMPQ9BR26 566 aa16.57■□□□□ 0.24
SDCBP-209ENST00000522243 MMP28Q9H239 520 aa16.57■□□□□ 0.24
SDCBP-209ENST00000522243 ZNF581Q9P0T4 197 aa16.57■□□□□ 0.24
SDCBP-209ENST00000522243 VWFP04275 2813 aa16.56■□□□□ 0.24
SDCBP-209ENST00000522243 TRAV39A0A0B4J263 110 aa16.56■□□□□ 0.24
SDCBP-209ENST00000522243 KBTBD11-OT1A0A1B0GTJ5 212 aa16.56■□□□□ 0.24
SDCBP-209ENST00000522243 OGG1O15527 345 aa16.56■□□□□ 0.24
SDCBP-209ENST00000522243 DDI2Q5TDH0 399 aa16.56■□□□□ 0.24
SDCBP-209ENST00000522243 ZFP41Q8N8Y5 198 aa16.56■□□□□ 0.24
SDCBP-209ENST00000522243 ZNF565Q8N9K5 539 aa16.56■□□□□ 0.24
SDCBP-209ENST00000522243 LEAP2Q969E1 77 aa16.56■□□□□ 0.24
SDCBP-209ENST00000522243 KIRREL1Q96J84 757 aa16.56■□□□□ 0.24
SDCBP-209ENST00000522243 SLC25A33Q9BSK2 321 aa16.56■□□□□ 0.24
SDCBP-209ENST00000522243 BARHL1Q9BZE3 327 aa16.56■□□□□ 0.24
SDCBP-209ENST00000522243 BABAM2Q9NXR7 383 aa16.56■□□□□ 0.24
SDCBP-209ENST00000522243 CALYQ9NYX4 217 aa16.56■□□□□ 0.24
SDCBP-209ENST00000522243 DIMT1Q9UNQ2 313 aaKnown RBP16.56■□□□□ 0.24
SDCBP-209ENST00000522243 ZNF281Q9Y2X9 895 aa16.56■□□□□ 0.24
SDCBP-209ENST00000522243 A0A087X0M5 115 aa16.55■□□□□ 0.24
SDCBP-209ENST00000522243 A0A1B0GX30 115 aa16.55■□□□□ 0.24
SDCBP-209ENST00000522243 SH2D7A6NKC9 451 aaPredicted RBP16.55■□□□□ 0.24
SDCBP-209ENST00000522243 ADARB2-AS1A8MUL3 147 aa16.55■□□□□ 0.24
SDCBP-209ENST00000522243 ALDOBP05062 364 aa16.55■□□□□ 0.24
SDCBP-209ENST00000522243 MYL12AP19105 171 aa16.55■□□□□ 0.24
SDCBP-209ENST00000522243 ZNF93P35789 620 aaPredicted RBP16.55■□□□□ 0.24
SDCBP-209ENST00000522243 CEACAM3P40198 252 aa16.55■□□□□ 0.24
SDCBP-209ENST00000522243 ARHGDIBP52566 201 aa16.55■□□□□ 0.24
SDCBP-209ENST00000522243 PPP3R1P63098 170 aa16.55■□□□□ 0.24
SDCBP-209ENST00000522243 EMX1Q04741 257 aaPredicted RBP16.55■□□□□ 0.24
SDCBP-209ENST00000522243 RSBN1Q5VWQ0 802 aaPredicted RBP16.55■□□□□ 0.24
SDCBP-209ENST00000522243 ASCL4Q6XD76 172 aa16.55■□□□□ 0.24
SDCBP-209ENST00000522243 C16orf82Q7Z2V1 217 aa16.55■□□□□ 0.24
SDCBP-209ENST00000522243 NDUFA11Q86Y39 141 aa16.55■□□□□ 0.24
SDCBP-209ENST00000522243 OR9G1Q8NH87 305 aa16.55■□□□□ 0.24
SDCBP-209ENST00000522243 RFESDQ8TAC1 157 aa16.55■□□□□ 0.24
SDCBP-209ENST00000522243 MRGPRDQ8TDS7 321 aa16.55■□□□□ 0.24
SDCBP-209ENST00000522243 CAPSLQ8WWF8 208 aa16.55■□□□□ 0.24
SDCBP-209ENST00000522243 R3HDM4Q96D70 268 aa16.55■□□□□ 0.24
SDCBP-209ENST00000522243 TMEM138Q9NPI0 162 aa16.55■□□□□ 0.24
SDCBP-209ENST00000522243 IDI2-AS1Q9NZ38 188 aa16.55■□□□□ 0.24
SDCBP-209ENST00000522243 EXOSC1Q9Y3B2 195 aaKnown RBP16.55■□□□□ 0.24
SDCBP-209ENST00000522243 IRGMA1A4Y4 181 aa16.54■□□□□ 0.24
SDCBP-209ENST00000522243 LY6LH3BQJ8 138 aa16.54■□□□□ 0.24
SDCBP-209ENST00000522243 C21orf33P30042 268 aaPredicted RBP16.54■□□□□ 0.24
SDCBP-209ENST00000522243 BDKRB2P30411 391 aa16.54■□□□□ 0.24
SDCBP-209ENST00000522243 BEAN1Q3B7T3 259 aa16.54■□□□□ 0.24
SDCBP-209ENST00000522243 ABCA11PQ4W5N1 156 aa16.54■□□□□ 0.24
SDCBP-209ENST00000522243 TTC23Q5W5X9 447 aa16.54■□□□□ 0.24
SDCBP-209ENST00000522243 SUMF2Q8NBJ7 301 aa16.54■□□□□ 0.24
SDCBP-209ENST00000522243 Q8NFD4 153 aa16.54■□□□□ 0.24
SDCBP-209ENST00000522243 OR5AU1Q8NGC0 362 aa16.54■□□□□ 0.24
SDCBP-209ENST00000522243 CREB3L1Q96BA8 519 aa16.54■□□□□ 0.24
SDCBP-209ENST00000522243 SMIM19Q96E16 107 aa16.54■□□□□ 0.24
SDCBP-209ENST00000522243 TMEM80Q96HE8 168 aa16.54■□□□□ 0.24
SDCBP-209ENST00000522243 AKR1E2Q96JD6 320 aa16.54■□□□□ 0.24
SDCBP-209ENST00000522243 RBM14Q96PK6 669 aaKnown RBP16.54■□□□□ 0.24
SDCBP-209ENST00000522243 METTL9Q9H1A3 318 aa16.54■□□□□ 0.24
SDCBP-209ENST00000522243 LIN7BQ9HAP6 207 aa16.54■□□□□ 0.24
SDCBP-209ENST00000522243 ST3GAL6Q9Y274 331 aa16.54■□□□□ 0.24
SDCBP-209ENST00000522243 A0A1W2PRX2 142 aa16.53■□□□□ 0.24
SDCBP-209ENST00000522243 OR2F2O95006 317 aa16.53■□□□□ 0.24
SDCBP-209ENST00000522243 IL1AP01583 271 aa16.53■□□□□ 0.24
SDCBP-209ENST00000522243 CSTBP04080 98 aaKnown RBP16.53■□□□□ 0.24
SDCBP-209ENST00000522243 LPLP06858 475 aa16.53■□□□□ 0.24
SDCBP-209ENST00000522243 SERPINA2P20848 420 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms