RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 TRAPPC6BQ86SZ2 158 aa11.13□□□□□ -0.63
CLK4-210ENST00000522136 MUC20Q8N307 709 aaPredicted RBP11.13□□□□□ -0.63
CLK4-210ENST00000522136 GVQW1Q8N7I0 195 aa11.13□□□□□ -0.63
CLK4-210ENST00000522136 OR4K15Q8NH41 348 aa11.13□□□□□ -0.63
CLK4-210ENST00000522136 C10orf105Q8TEF2 133 aa11.13□□□□□ -0.63
CLK4-210ENST00000522136 MAFIPQ8WZ33 124 aa11.13□□□□□ -0.63
CLK4-210ENST00000522136 COQ2Q96H96 371 aa11.13□□□□□ -0.63
CLK4-210ENST00000522136 MED30Q96HR3 178 aa11.13□□□□□ -0.63
CLK4-210ENST00000522136 IGHV4-30-2A0A087WSY4 118 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 H3BUI4 141 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 DVL1O14640 695 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 CTDSPLO15194 276 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 NDUFA2O43678 99 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 TPPPO94811 219 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 GLAP06280 429 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 GLIPR1P48060 266 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 ARL6IP1Q15041 203 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 TMEM155Q4W5P6 130 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 SLC36A1Q7Z2H8 476 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 C5orf24Q7Z6I8 188 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 OR8H2Q8N162 312 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 GDPD1Q8N9F7 314 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 GPX8Q8TED1 209 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 SMIM4Q8WVI0 70 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 FCAMRQ8WWV6 532 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 DNTTIP1Q9H147 329 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 KAAG1Q9UBP8 84 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 PCDHB10Q9UN67 800 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 ARHGAP32A7KAX9 2087 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 MALRD1Q5VYJ5 2156 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 DSCAML1Q8TD84 2053 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 GABARAPH6UMI1 98 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 WNT2P09544 360 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 CSF3P09919 207 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 RPS2P15880 293 aaKnown RBP11.12□□□□□ -0.63
CLK4-210ENST00000522136 NDUFB7P17568 137 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 CD40LGP29965 261 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 SEC61A1P61619 476 aaKnown RBP11.12□□□□□ -0.63
CLK4-210ENST00000522136 CLEC12BQ2HXU8 276 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 RSBN1Q5VWQ0 802 aaPredicted RBP11.12□□□□□ -0.63
CLK4-210ENST00000522136 ZNF497Q6ZNH5 498 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 DNM1P46Q6ZS02 220 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 PIP4P2Q8N4L2 257 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 C15orf40Q8WUR7 153 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 CCDC107Q8WV48 283 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 MBD6Q96DN6 1003 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 PIMREGQ9BSJ6 248 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 THAP7Q9BT49 309 aaPredicted RBP11.12□□□□□ -0.63
CLK4-210ENST00000522136 DCTN5Q9BTE1 182 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 ST6GALNAC5Q9BVH7 336 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 CHMP1AQ9HD42 196 aaPredicted RBP11.12□□□□□ -0.63
CLK4-210ENST00000522136 RABL2AQ9UBK7 228 aaPredicted RBP11.12□□□□□ -0.63
CLK4-210ENST00000522136 SLC25A10Q9UBX3 287 aaPredicted RBP11.12□□□□□ -0.63
CLK4-210ENST00000522136 KIF25Q9UIL4 384 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 RABL2BQ9UNT1 228 aa11.12□□□□□ -0.63
CLK4-210ENST00000522136 VWC2LB2RUY7 222 aa11.11□□□□□ -0.63
CLK4-210ENST00000522136 MGST3O14880 152 aa11.11□□□□□ -0.63
CLK4-210ENST00000522136 NDUFB3O43676 98 aa11.11□□□□□ -0.63
CLK4-210ENST00000522136 GSTZ1O43708 216 aaPredicted RBP11.11□□□□□ -0.63
CLK4-210ENST00000522136 ORC5O43913 435 aa11.11□□□□□ -0.63
CLK4-210ENST00000522136 MT-ND4P03905 459 aa11.11□□□□□ -0.63
CLK4-210ENST00000522136 LPLP06858 475 aa11.11□□□□□ -0.63
CLK4-210ENST00000522136 EDDM3BP56851 147 aa11.11□□□□□ -0.63
CLK4-210ENST00000522136 KRBOX4Q5JUW0 171 aa11.11□□□□□ -0.63
CLK4-210ENST00000522136 SHEQ5VZ18 495 aa11.11□□□□□ -0.63
CLK4-210ENST00000522136 ZNF841Q6ZN19 808 aa11.11□□□□□ -0.63
CLK4-210ENST00000522136 SETD6Q8TBK2 473 aa11.11□□□□□ -0.63
CLK4-210ENST00000522136 MRPL30Q8TCC3 161 aaKnown RBP11.11□□□□□ -0.63
CLK4-210ENST00000522136 PATZ1Q9HBE1 687 aaKnown RBP11.11□□□□□ -0.63
CLK4-210ENST00000522136 ITPR2Q14571 2701 aa11.11□□□□□ -0.63
CLK4-210ENST00000522136 CA11O75493 328 aa11.1□□□□□ -0.63
CLK4-210ENST00000522136 NAPSAO96009 420 aa11.1□□□□□ -0.63
CLK4-210ENST00000522136 CSN2P05814 226 aa11.1□□□□□ -0.63
CLK4-210ENST00000522136 FCGR3AP08637 254 aa11.1□□□□□ -0.63
CLK4-210ENST00000522136 RCC1P18754 421 aaPredicted RBP11.1□□□□□ -0.63
CLK4-210ENST00000522136 MRPS15P82914 257 aaKnown RBP11.1□□□□□ -0.63
CLK4-210ENST00000522136 IFITM3Q01628 133 aa11.1□□□□□ -0.63
CLK4-210ENST00000522136 GDPD3Q7L5L3 318 aa11.1□□□□□ -0.63
CLK4-210ENST00000522136 SPICQ8N5J4 248 aa11.1□□□□□ -0.63
CLK4-210ENST00000522136 OR5D13Q8NGL4 314 aa11.1□□□□□ -0.63
CLK4-210ENST00000522136 CLDND2Q8NHS1 167 aa11.1□□□□□ -0.63
CLK4-210ENST00000522136 PPP1R35Q8TAP8 253 aa11.1□□□□□ -0.63
CLK4-210ENST00000522136 NINJ1Q92982 152 aa11.1□□□□□ -0.63
CLK4-210ENST00000522136 NEIL1Q96FI4 390 aaPredicted RBP11.1□□□□□ -0.63
CLK4-210ENST00000522136 FAM234AQ9H0X4 552 aa11.1□□□□□ -0.63
CLK4-210ENST00000522136 SCPEP1Q9HB40 452 aa11.1□□□□□ -0.63
CLK4-210ENST00000522136 C12orf4Q9NQ89 552 aa11.1□□□□□ -0.63
CLK4-210ENST00000522136 ABCB10Q9NRK6 738 aa11.1□□□□□ -0.63
CLK4-210ENST00000522136 MIOXQ9UGB7 285 aa11.1□□□□□ -0.63
CLK4-210ENST00000522136 PRRC2AP48634 2157 aaKnown RBP11.1□□□□□ -0.63
CLK4-210ENST00000522136 IGKV1D-8A0A087WSZ0 117 aa11.1□□□□□ -0.63
CLK4-210ENST00000522136 MEIKINA0A087WXM9 373 aa11.1□□□□□ -0.63
CLK4-210ENST00000522136 SULT1C2O00338 296 aa11.1□□□□□ -0.63
CLK4-210ENST00000522136 IL7P13232 177 aa11.1□□□□□ -0.63
CLK4-210ENST00000522136 MRPS10P82664 201 aaKnown RBP11.1□□□□□ -0.63
CLK4-210ENST00000522136 LRRC10Q5BKY1 277 aa11.1□□□□□ -0.63
CLK4-210ENST00000522136 SLC35E4Q6ICL7 350 aa11.1□□□□□ -0.63
CLK4-210ENST00000522136 OR52W1Q6IF63 320 aa11.1□□□□□ -0.63
CLK4-210ENST00000522136 LRRC75A-AS1Q8N1F1 130 aa11.1□□□□□ -0.63
CLK4-210ENST00000522136 OR8B3Q8NGG8 313 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms