RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 MYOZ1Q9NP98 299 aaPredicted RBP8.74□□□□□ -1.01
MCF2-209ENST00000520602 RPS10P5Q9NQ39 176 aa8.74□□□□□ -1.01
MCF2-209ENST00000520602 RASL12Q9NYN1 266 aa8.74□□□□□ -1.01
MCF2-209ENST00000520602 HSF4Q9ULV5 492 aa8.74□□□□□ -1.01
MCF2-209ENST00000520602 REV3LO60673 3130 aa8.74□□□□□ -1.01
MCF2-209ENST00000520602 PRRC2CQ9Y520 2896 aaKnown RBP8.74□□□□□ -1.01
MCF2-209ENST00000520602 SMCO3A2RU48 225 aa8.74□□□□□ -1.01
MCF2-209ENST00000520602 WIPF3A6NGB9 483 aa8.74□□□□□ -1.01
MCF2-209ENST00000520602 CD8AP01732 235 aa8.74□□□□□ -1.01
MCF2-209ENST00000520602 IAPPP10997 89 aa8.74□□□□□ -1.01
MCF2-209ENST00000520602 IRF2P14316 349 aa8.74□□□□□ -1.01
MCF2-209ENST00000520602 FGF12P61328 243 aa8.74□□□□□ -1.01
MCF2-209ENST00000520602 GPR157Q5UAW9 335 aa8.74□□□□□ -1.01
MCF2-209ENST00000520602 BVESQ8NE79 360 aa8.74□□□□□ -1.01
MCF2-209ENST00000520602 PBDC1Q9BVG4 233 aa8.74□□□□□ -1.01
MCF2-209ENST00000520602 LINC00470Q9BZP3 86 aa8.74□□□□□ -1.01
MCF2-209ENST00000520602 KCNJ16Q9NPI9 418 aa8.74□□□□□ -1.01
MCF2-209ENST00000520602 MRPS18CQ9Y3D5 142 aaKnown RBP8.74□□□□□ -1.01
MCF2-209ENST00000520602 SPTAN1Q13813 2472 aaKnown RBP8.74□□□□□ -1.01
MCF2-209ENST00000520602 PKDREJQ9NTG1 2253 aa8.74□□□□□ -1.01
MCF2-209ENST00000520602 MSGN1A6NI15 193 aa8.74□□□□□ -1.01
MCF2-209ENST00000520602 TRDCB7Z8K6 153 aa8.74□□□□□ -1.01
MCF2-209ENST00000520602 SNRNP70P08621 437 aaKnown RBP8.74□□□□□ -1.01
MCF2-209ENST00000520602 ZP3P21754 424 aa8.74□□□□□ -1.01
MCF2-209ENST00000520602 BMP5P22003 454 aa8.74□□□□□ -1.01
MCF2-209ENST00000520602 OTX1P32242 354 aaPredicted RBP8.74□□□□□ -1.01
MCF2-209ENST00000520602 CEACAM6P40199 344 aa8.74□□□□□ -1.01
MCF2-209ENST00000520602 MECP2P51608 486 aaKnown RBP8.74□□□□□ -1.01
MCF2-209ENST00000520602 ZNF345Q14585 488 aa8.74□□□□□ -1.01
MCF2-209ENST00000520602 SIGIRRQ6IA17 410 aa8.74□□□□□ -1.01
MCF2-209ENST00000520602 DHRS9Q9BPW9 319 aa8.74□□□□□ -1.01
MCF2-209ENST00000520602 REPIN1Q9BWE0 567 aaKnown RBP8.74□□□□□ -1.01
MCF2-209ENST00000520602 C1QTNF5Q9BXJ0 243 aa8.74□□□□□ -1.01
MCF2-209ENST00000520602 SHARPINQ9H0F6 387 aa8.74□□□□□ -1.01
MCF2-209ENST00000520602 TMED3Q9Y3Q3 217 aa8.74□□□□□ -1.01
MCF2-209ENST00000520602 RPS10-NUDT3A0A1W2PQS6 291 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 NKX2-6A6NCS4 301 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 GPR137BO60478 399 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 CLDN1O95832 211 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 IGHV3-13P01766 116 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 IGHV3-7P01780 117 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 TNFSF10P50591 281 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 ERVS71-1P61550 626 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 ZNF826PQ6ZT77 177 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 SLC35G3Q8N808 338 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 TMEM230Q96A57 120 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 ADGRG7Q96K78 797 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 C1orf147Q96MC9 270 aaPredicted RBP8.73□□□□□ -1.01
MCF2-209ENST00000520602 EML6Q6ZMW3 1958 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 LAMA1P25391 3075 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 VSTM5A8MXK1 200 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 DEFB108AA8MXU0 73 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 J3QT63 122 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 SPRY3O43610 288 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 CST4P01036 141 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 CELA3BP08861 270 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 CSRP2Q16527 193 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 MPV17LQ2QL34 196 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 OR8G2PQ6IF36 304 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 RGS7BPQ6MZT1 257 aaPredicted RBP8.73□□□□□ -1.01
MCF2-209ENST00000520602 FAM185AQ8N0U4 392 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 ZNF709Q8N972 641 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 TCTEX1D2Q8WW35 142 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 PHYHIPLQ96FC7 376 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 SH2D2AQ9NP31 389 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 FBXO7Q9Y3I1 522 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 CEBPZOSA8MTT3 80 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 CFPP27918 469 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 ZNF266Q14584 549 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 KRBOX4Q5JUW0 171 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 C5orf24Q7Z6I8 188 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 OR10V1Q8NGI7 309 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 ZNF71Q9NQZ8 489 aaPredicted RBP8.73□□□□□ -1.01
MCF2-209ENST00000520602 TAAR3PQ9P1P4 343 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 SHANK1Q9Y566 2161 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 PIGBOS1A0A0B4J2F0 54 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 RNF222A6NCQ9 220 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 RHBDL1O75783 438 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 SNAPINO95295 136 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 KRASP01116 189 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 MMP7P09237 267 aaPredicted RBP8.73□□□□□ -1.01
MCF2-209ENST00000520602 OR3A1P47881 315 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 FOXC1Q12948 553 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 SPANXN5Q5MJ07 72 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 ZNF529Q6P280 563 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 C20orf24Q9BUV8 137 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 MTCH1Q9NZJ7 389 aa8.73□□□□□ -1.01
MCF2-209ENST00000520602 HEATR1Q9H583 2144 aaKnown RBP8.72□□□□□ -1.01
MCF2-209ENST00000520602 IGHV3-43A0A0B4J1X8 118 aa8.72□□□□□ -1.01
MCF2-209ENST00000520602 IFNA17P01571 189 aa8.72□□□□□ -1.01
MCF2-209ENST00000520602 IGHV3-43DP0DP04 118 aa8.72□□□□□ -1.01
MCF2-209ENST00000520602 CD82P27701 267 aa8.72□□□□□ -1.01
MCF2-209ENST00000520602 UCP2P55851 309 aa8.72□□□□□ -1.01
MCF2-209ENST00000520602 MZT1Q08AG7 82 aa8.72□□□□□ -1.01
MCF2-209ENST00000520602 CATR1Q13166 79 aa8.72□□□□□ -1.01
MCF2-209ENST00000520602 PEA15Q15121 130 aa8.72□□□□□ -1.01
MCF2-209ENST00000520602 OR8B8Q15620 311 aa8.72□□□□□ -1.01
MCF2-209ENST00000520602 PRAMEF6Q5VXH4 476 aa8.72□□□□□ -1.01
MCF2-209ENST00000520602 TPRX1Q8N7U7 411 aa8.72□□□□□ -1.01
MCF2-209ENST00000520602 WBP1Q96G27 269 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms