RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 LOC102724200A0A096LPH7 203 aaPredicted RBP2.53□□□□□ -2
SQLE-204ENST00000520493 C8orf87E5RJ46 101 aa2.53□□□□□ -2
SQLE-204ENST00000520493 M0R036 132 aa2.53□□□□□ -2
SQLE-204ENST00000520493 AZIN1O14977 448 aa2.53□□□□□ -2
SQLE-204ENST00000520493 BET1O15155 118 aa2.53□□□□□ -2
SQLE-204ENST00000520493 TCF21O43680 179 aa2.53□□□□□ -2
SQLE-204ENST00000520493 COX7A2P2O60397 106 aa2.53□□□□□ -2
SQLE-204ENST00000520493 EPPINO95925 133 aa2.53□□□□□ -2
SQLE-204ENST00000520493 ASS1P00966 412 aaKnown RBP2.53□□□□□ -2
SQLE-204ENST00000520493 IFNA5P01569 189 aa2.53□□□□□ -2
SQLE-204ENST00000520493 NEFHP12036 1026 aa2.53□□□□□ -2
SQLE-204ENST00000520493 CD99P14209 185 aa2.53□□□□□ -2
SQLE-204ENST00000520493 ZNF32P17041 273 aa2.53□□□□□ -2
SQLE-204ENST00000520493 IMPA1P29218 277 aa2.53□□□□□ -2
SQLE-204ENST00000520493 GRPRP30550 384 aa2.53□□□□□ -2
SQLE-204ENST00000520493 PYCR1P32322 319 aa2.53□□□□□ -2
SQLE-204ENST00000520493 CDKN2CP42773 168 aa2.53□□□□□ -2
SQLE-204ENST00000520493 CBX5P45973 191 aa2.53□□□□□ -2
SQLE-204ENST00000520493 GTF2BQ00403 316 aa2.53□□□□□ -2
SQLE-204ENST00000520493 ZNF235Q14590 738 aa2.53□□□□□ -2
SQLE-204ENST00000520493 Q5W150 140 aa2.53□□□□□ -2
SQLE-204ENST00000520493 LPCAT4Q643R3 524 aa2.53□□□□□ -2
SQLE-204ENST00000520493 TTC33Q6PID6 262 aaPredicted RBP2.53□□□□□ -2
SQLE-204ENST00000520493 LINC00596Q86U02 117 aa2.53□□□□□ -2
SQLE-204ENST00000520493 C10orf67Q8IYJ2 551 aa2.53□□□□□ -2
SQLE-204ENST00000520493 OR8A1Q8NGG7 326 aa2.53□□□□□ -2
SQLE-204ENST00000520493 LINC01560Q8TB33 94 aa2.53□□□□□ -2
SQLE-204ENST00000520493 CIRBP-AS1Q8TBR5 109 aa2.53□□□□□ -2
SQLE-204ENST00000520493 FAM57AQ8TBR7 257 aa2.53□□□□□ -2
SQLE-204ENST00000520493 ESR2Q92731 530 aa2.53□□□□□ -2
SQLE-204ENST00000520493 SLC25A46Q96AG3 418 aa2.53□□□□□ -2
SQLE-204ENST00000520493 PACRGQ96M98 296 aaPredicted RBP2.53□□□□□ -2
SQLE-204ENST00000520493 PRSS27Q9BQR3 290 aa2.53□□□□□ -2
SQLE-204ENST00000520493 EBPLQ9BY08 206 aa2.53□□□□□ -2
SQLE-204ENST00000520493 DERL2Q9GZP9 239 aa2.53□□□□□ -2
SQLE-204ENST00000520493 UBQLN4Q9NRR5 601 aa2.53□□□□□ -2
SQLE-204ENST00000520493 CA10Q9NS85 328 aa2.53□□□□□ -2
SQLE-204ENST00000520493 FAM206AQ9NX38 181 aa2.53□□□□□ -2
SQLE-204ENST00000520493 SNX10Q9Y5X0 201 aa2.53□□□□□ -2
SQLE-204ENST00000520493 ZNF780BQ9Y6R6 833 aa2.53□□□□□ -2
SQLE-204ENST00000520493 IGLV3-16A0A075B6K0 115 aa2.52□□□□□ -2.01
SQLE-204ENST00000520493 TMEM250H0YL14 139 aa2.52□□□□□ -2.01
SQLE-204ENST00000520493 H3BP45 60 aa2.52□□□□□ -2.01
SQLE-204ENST00000520493 CXCR6O00574 342 aa2.52□□□□□ -2.01
SQLE-204ENST00000520493 PFDN6O15212 129 aa2.52□□□□□ -2.01
SQLE-204ENST00000520493 RBFOX2O43251 390 aaKnown RBP eCLIP2.52□□□□□ -2.01
SQLE-204ENST00000520493 MED6O75586 246 aa2.52□□□□□ -2.01
SQLE-204ENST00000520493 VAMP5O95183 116 aa2.52□□□□□ -2.01
SQLE-204ENST00000520493 CYB5R3P00387 301 aaPredicted RBP2.52□□□□□ -2.01
SQLE-204ENST00000520493 ISG15P05161 165 aa2.52□□□□□ -2.01
SQLE-204ENST00000520493 IFNGR2P38484 337 aa2.52□□□□□ -2.01
SQLE-204ENST00000520493 AP2S1P53680 142 aaPredicted RBP2.52□□□□□ -2.01
SQLE-204ENST00000520493 TAS2R43P59537 309 aa2.52□□□□□ -2.01
SQLE-204ENST00000520493 ATP5G2Q06055 141 aa2.52□□□□□ -2.01
SQLE-204ENST00000520493 ELOCQ15369 112 aa2.52□□□□□ -2.01
SQLE-204ENST00000520493 ZFP1Q6P2D0 407 aa2.52□□□□□ -2.01
SQLE-204ENST00000520493 LRRN1Q6UXK5 716 aa2.52□□□□□ -2.01
SQLE-204ENST00000520493 TIFABQ6ZNK6 161 aa2.52□□□□□ -2.01
SQLE-204ENST00000520493 Q6ZR03 302 aa2.52□□□□□ -2.01
SQLE-204ENST00000520493 SHISA6Q6ZSJ9 500 aa2.52□□□□□ -2.01
SQLE-204ENST00000520493 UBALD2Q8IYN6 164 aa2.52□□□□□ -2.01
SQLE-204ENST00000520493 ZIC4Q8N9L1 334 aa2.52□□□□□ -2.01
SQLE-204ENST00000520493 GATD1Q8NB37 220 aa2.52□□□□□ -2.01
SQLE-204ENST00000520493 OR5H2Q8NGV7 314 aa2.52□□□□□ -2.01
SQLE-204ENST00000520493 PPP1R14BQ96C90 147 aa2.52□□□□□ -2.01
SQLE-204ENST00000520493 OLFM3Q96PB7 478 aa2.52□□□□□ -2.01
SQLE-204ENST00000520493 RNF157Q96PX1 679 aa2.52□□□□□ -2.01
SQLE-204ENST00000520493 CDX2Q99626 313 aaPredicted RBP2.52□□□□□ -2.01
SQLE-204ENST00000520493 MRPS26Q9BYN8 205 aaKnown RBP2.52□□□□□ -2.01
SQLE-204ENST00000520493 CHST5Q9GZS9 411 aa2.52□□□□□ -2.01
SQLE-204ENST00000520493 WFDC1Q9HC57 220 aa2.52□□□□□ -2.01
SQLE-204ENST00000520493 TAC3Q9UHF0 121 aa2.52□□□□□ -2.01
SQLE-204ENST00000520493 COL4A4P53420 1690 aaPredicted RBP2.52□□□□□ -2.01
SQLE-204ENST00000520493 TRIOBPQ9H2D6 2365 aa2.52□□□□□ -2.01
SQLE-204ENST00000520493 PTPRKQ15262 1439 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 SETXQ7Z333 2677 aaKnown RBP2.51□□□□□ -2.01
SQLE-204ENST00000520493 CLUHO75153 1309 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 IGHV1-3A0A0C4DH29 117 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 IGKV1-6A0A0C4DH72 117 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 C21orf140B9A014 251 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 LGALS9O00182 355 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 MAGEB4O15481 346 aaPredicted RBP2.51□□□□□ -2.01
SQLE-204ENST00000520493 FOXH1O75593 365 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 CCNE2O96020 404 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 IGKV1-39P01597 117 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 IGKV1D-39P04432 117 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 SOD3P08294 240 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 SCGB1C2P0DMR2 95 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 CFL1P23528 166 aaKnown RBP2.51□□□□□ -2.01
SQLE-204ENST00000520493 AGTR1P30556 359 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 S100A5P33763 92 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 MPIP34949 423 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 GNA13Q14344 377 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 SPIN4Q56A73 249 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 ZNF684Q5T5D7 378 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 FAM222AQ5U5X8 452 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 TMEM215Q68D42 235 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 ZNF773Q6PK81 442 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 CD200R1LQ6Q8B3 271 aa2.51□□□□□ -2.01
SQLE-204ENST00000520493 CLEC20AQ6ZU45 233 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms