RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 HIPK2Q9H2X6 1198 aa15.79■□□□□ 0.12
SDC2-202ENST00000518385 GSN-AS1Q9NRJ2 163 aa15.79■□□□□ 0.12
SDC2-202ENST00000518385 TMED3Q9Y3Q3 217 aa15.79■□□□□ 0.12
SDC2-202ENST00000518385 IGKV1-9A0A0C4DH69 117 aa15.78■□□□□ 0.12
SDC2-202ENST00000518385 MMP7P09237 267 aaPredicted RBP15.78■□□□□ 0.12
SDC2-202ENST00000518385 COX5BP10606 129 aa15.78■□□□□ 0.12
SDC2-202ENST00000518385 FCGR2AP12318 317 aa15.78■□□□□ 0.12
SDC2-202ENST00000518385 UCNP55089 124 aa15.78■□□□□ 0.12
SDC2-202ENST00000518385 OR2A2Q6IF42 318 aa15.78■□□□□ 0.12
SDC2-202ENST00000518385 ZNF774Q6NX45 483 aa15.78■□□□□ 0.12
SDC2-202ENST00000518385 APH1AQ96BI3 265 aa15.78■□□□□ 0.12
SDC2-202ENST00000518385 SGK3Q96BR1 496 aa15.78■□□□□ 0.12
SDC2-202ENST00000518385 WDYHV1Q96HA8 205 aa15.78■□□□□ 0.12
SDC2-202ENST00000518385 Q96M66 194 aa15.78■□□□□ 0.12
SDC2-202ENST00000518385 WNT5BQ9H1J7 359 aa15.78■□□□□ 0.12
SDC2-202ENST00000518385 SLC7A10Q9NS82 523 aa15.78■□□□□ 0.12
SDC2-202ENST00000518385 RAXQ9Y2V3 346 aa15.78■□□□□ 0.12
SDC2-202ENST00000518385 A0A087WWC5 75 aa15.77■□□□□ 0.11
SDC2-202ENST00000518385 MKRN2OSH3BPM6 223 aa15.77■□□□□ 0.11
SDC2-202ENST00000518385 TGOLN2O43493 480 aa15.77■□□□□ 0.11
SDC2-202ENST00000518385 KNG1P01042 644 aa15.77■□□□□ 0.11
SDC2-202ENST00000518385 IGHG3P01860 377 aa15.77■□□□□ 0.11
SDC2-202ENST00000518385 PI3P19957 117 aa15.77■□□□□ 0.11
SDC2-202ENST00000518385 HTR5AP47898 357 aa15.77■□□□□ 0.11
SDC2-202ENST00000518385 TMPRSS3P57727 454 aa15.77■□□□□ 0.11
SDC2-202ENST00000518385 POLR2GP62487 172 aaKnown RBP eCLIP15.77■□□□□ 0.11
SDC2-202ENST00000518385 ZNF266Q14584 549 aa15.77■□□□□ 0.11
SDC2-202ENST00000518385 TMEM187Q14656 261 aa15.77■□□□□ 0.11
SDC2-202ENST00000518385 TBR1Q16650 682 aa15.77■□□□□ 0.11
SDC2-202ENST00000518385 ZNF100Q8IYN0 542 aa15.77■□□□□ 0.11
SDC2-202ENST00000518385 BHLHE23Q8NDY6 225 aa15.77■□□□□ 0.11
SDC2-202ENST00000518385 METTL9Q9H1A3 318 aa15.77■□□□□ 0.11
SDC2-202ENST00000518385 DEFB127Q9H1M4 99 aa15.77■□□□□ 0.11
SDC2-202ENST00000518385 SPACA1Q9HBV2 294 aa15.77■□□□□ 0.11
SDC2-202ENST00000518385 GLRX2Q9NS18 164 aa15.77■□□□□ 0.11
SDC2-202ENST00000518385 PLEKHJ1Q9NW61 149 aa15.77■□□□□ 0.11
SDC2-202ENST00000518385 TNRC6AQ8NDV7 1962 aaKnown RBP15.77■□□□□ 0.11
SDC2-202ENST00000518385 CXorf65A6NEN9 183 aa15.76■□□□□ 0.11
SDC2-202ENST00000518385 C9JQL5 133 aa15.76■□□□□ 0.11
SDC2-202ENST00000518385 E9PLN8 166 aa15.76■□□□□ 0.11
SDC2-202ENST00000518385 M0R036 132 aa15.76■□□□□ 0.11
SDC2-202ENST00000518385 SDCBPO00560 298 aaPredicted RBP15.76■□□□□ 0.11
SDC2-202ENST00000518385 ST8SIA3O43173 380 aa15.76■□□□□ 0.11
SDC2-202ENST00000518385 ZNF728P0DKX0 622 aa15.76■□□□□ 0.11
SDC2-202ENST00000518385 MMP9P14780 707 aa15.76■□□□□ 0.11
SDC2-202ENST00000518385 ACKR3P25106 362 aa15.76■□□□□ 0.11
SDC2-202ENST00000518385 FABP9Q0Z7S8 132 aa15.76■□□□□ 0.11
SDC2-202ENST00000518385 ABCA11PQ4W5N1 156 aa15.76■□□□□ 0.11
SDC2-202ENST00000518385 LIAT1Q6ZQX7 453 aa15.76■□□□□ 0.11
SDC2-202ENST00000518385 Q6ZS92 163 aa15.76■□□□□ 0.11
SDC2-202ENST00000518385 FAM219AQ8IW50 185 aa15.76■□□□□ 0.11
SDC2-202ENST00000518385 LINC00469Q8N7U9 141 aa15.76■□□□□ 0.11
SDC2-202ENST00000518385 C18orf12Q96KH6 178 aa15.76■□□□□ 0.11
SDC2-202ENST00000518385 SPIN2AQ99865 258 aa15.76■□□□□ 0.11
SDC2-202ENST00000518385 SPIN2BQ9BPZ2 258 aa15.76■□□□□ 0.11
SDC2-202ENST00000518385 SOX7Q9BT81 388 aa15.76■□□□□ 0.11
SDC2-202ENST00000518385 PRDM14Q9GZV8 571 aa15.76■□□□□ 0.11
SDC2-202ENST00000518385 CALHM2Q9HA72 323 aa15.76■□□□□ 0.11
SDC2-202ENST00000518385 LSM5Q9Y4Y9 91 aaKnown RBP15.76■□□□□ 0.11
SDC2-202ENST00000518385 CEP295Q9C0D2 2601 aa15.76■□□□□ 0.11
SDC2-202ENST00000518385 DUXBA0A1W2PPF3 345 aa15.75■□□□□ 0.11
SDC2-202ENST00000518385 CDS2O95674 445 aa15.75■□□□□ 0.11
SDC2-202ENST00000518385 SNRNP70P08621 437 aaKnown RBP15.75■□□□□ 0.11
SDC2-202ENST00000518385 DBHP09172 617 aa15.75■□□□□ 0.11
SDC2-202ENST00000518385 OR5H8P0DN80 308 aa15.75■□□□□ 0.11
SDC2-202ENST00000518385 ARF1P84077 181 aaKnown RBP15.75■□□□□ 0.11
SDC2-202ENST00000518385 PMP22Q01453 160 aa15.75■□□□□ 0.11
SDC2-202ENST00000518385 CNN3Q15417 329 aaKnown RBP15.75■□□□□ 0.11
SDC2-202ENST00000518385 DPPA3Q6W0C5 159 aa15.75■□□□□ 0.11
SDC2-202ENST00000518385 TECTBQ96PL2 329 aa15.75■□□□□ 0.11
SDC2-202ENST00000518385 EIF5A2Q9GZV4 153 aaKnown RBP15.75■□□□□ 0.11
SDC2-202ENST00000518385 NIT2Q9NQR4 276 aa15.75■□□□□ 0.11
SDC2-202ENST00000518385 PLA2G2EQ9NZK7 142 aa15.75■□□□□ 0.11
SDC2-202ENST00000518385 PIGLQ9Y2B2 252 aa15.75■□□□□ 0.11
SDC2-202ENST00000518385 K7EM74 188 aa15.75■□□□□ 0.11
SDC2-202ENST00000518385 XRCC2O43543 280 aa15.75■□□□□ 0.11
SDC2-202ENST00000518385 MBPP02686 304 aaPredicted RBP15.75■□□□□ 0.11
SDC2-202ENST00000518385 LCATP04180 440 aa15.75■□□□□ 0.11
SDC2-202ENST00000518385 FBP1P09467 338 aa15.75■□□□□ 0.11
SDC2-202ENST00000518385 ARR3P36575 388 aa15.75■□□□□ 0.11
SDC2-202ENST00000518385 SULT1A1P50225 295 aa15.75■□□□□ 0.11
SDC2-202ENST00000518385 GNMTQ14749 295 aa15.75■□□□□ 0.11
SDC2-202ENST00000518385 ASCL4Q6XD76 172 aa15.75■□□□□ 0.11
SDC2-202ENST00000518385 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.75■□□□□ 0.11
SDC2-202ENST00000518385 MRPL24Q96A35 216 aaKnown RBP15.75■□□□□ 0.11
SDC2-202ENST00000518385 MARS2Q96GW9 593 aaKnown RBP15.75■□□□□ 0.11
SDC2-202ENST00000518385 REEP6Q96HR9 211 aa15.75■□□□□ 0.11
SDC2-202ENST00000518385 SPACA5Q96QH8 159 aa15.75■□□□□ 0.11
SDC2-202ENST00000518385 OPA3Q9H6K4 179 aa15.75■□□□□ 0.11
SDC2-202ENST00000518385 SIRT7Q9NRC8 400 aa15.75■□□□□ 0.11
SDC2-202ENST00000518385 ZNF701Q9NV72 531 aaPredicted RBP15.75■□□□□ 0.11
SDC2-202ENST00000518385 DMRT1Q9Y5R6 373 aa15.75■□□□□ 0.11
SDC2-202ENST00000518385 LIPGQ9Y5X9 500 aa15.75■□□□□ 0.11
SDC2-202ENST00000518385 SLC22A20A6NK97 555 aa15.74■□□□□ 0.11
SDC2-202ENST00000518385 AGPAT2O15120 278 aa15.74■□□□□ 0.11
SDC2-202ENST00000518385 HSPA12AO43301 675 aa15.74■□□□□ 0.11
SDC2-202ENST00000518385 RAB2AP61019 212 aa15.74■□□□□ 0.11
SDC2-202ENST00000518385 RSU1Q15404 277 aa15.74■□□□□ 0.11
SDC2-202ENST00000518385 SNAI3Q3KNW1 292 aa15.74■□□□□ 0.11
SDC2-202ENST00000518385 RBMXL3Q8N7X1 1067 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms