RNA–Protein interactions for RNA: ENST00000517730.5

PCM1-204, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-204ENST00000517730 PPP1R14DQ9NXH3 145 aa13.15□□□□□ -0.3
PCM1-204ENST00000517730 IL36GQ9NZH8 169 aa13.15□□□□□ -0.3
PCM1-204ENST00000517730 VAX2Q9UIW0 290 aa13.15□□□□□ -0.3
PCM1-204ENST00000517730 RP1P56715 2156 aa13.15□□□□□ -0.3
PCM1-204ENST00000517730 FAM221AA4D161 298 aa13.14□□□□□ -0.31
PCM1-204ENST00000517730 SHISA7A6NL88 538 aa13.14□□□□□ -0.31
PCM1-204ENST00000517730 ATXN7O15265 892 aaPredicted RBP13.14□□□□□ -0.31
PCM1-204ENST00000517730 OPN1LWP04000 364 aa13.14□□□□□ -0.31
PCM1-204ENST00000517730 ZNF154Q13106 437 aa13.14□□□□□ -0.31
PCM1-204ENST00000517730 HNF4GQ14541 408 aa13.14□□□□□ -0.31
PCM1-204ENST00000517730 SHBQ15464 509 aa13.14□□□□□ -0.31
PCM1-204ENST00000517730 NMSQ5H8A3 153 aa13.14□□□□□ -0.31
PCM1-204ENST00000517730 ZNF787Q6DD87 383 aa13.14□□□□□ -0.31
PCM1-204ENST00000517730 TGIF2LYQ8IUE0 185 aa13.14□□□□□ -0.31
PCM1-204ENST00000517730 C20orf196Q8IYI0 205 aa13.14□□□□□ -0.31
PCM1-204ENST00000517730 MBD3L1Q8WWY6 194 aa13.14□□□□□ -0.31
PCM1-204ENST00000517730 BORCS8Q96FH0 119 aa13.14□□□□□ -0.31
PCM1-204ENST00000517730 ACY3Q96HD9 319 aa13.14□□□□□ -0.31
PCM1-204ENST00000517730 IGFLR1Q9H665 355 aa13.14□□□□□ -0.31
PCM1-204ENST00000517730 P4HTMQ9NXG6 502 aa13.14□□□□□ -0.31
PCM1-204ENST00000517730 WASF3Q9UPY6 502 aa13.14□□□□□ -0.31
PCM1-204ENST00000517730 TDRD6O60522 2096 aaKnown RBP13.14□□□□□ -0.31
PCM1-204ENST00000517730 IGHV3-20A0A0C4DH32 117 aa13.14□□□□□ -0.31
PCM1-204ENST00000517730 TMEM50AO95807 157 aa13.14□□□□□ -0.31
PCM1-204ENST00000517730 GNRHRP30968 328 aa13.14□□□□□ -0.31
PCM1-204ENST00000517730 C1orf189Q5VU69 101 aa13.14□□□□□ -0.31
PCM1-204ENST00000517730 THNSL2Q86YJ6 484 aa13.14□□□□□ -0.31
PCM1-204ENST00000517730 CARFQ8N187 725 aa13.14□□□□□ -0.31
PCM1-204ENST00000517730 THAP3Q8WTV1 239 aaPredicted RBP13.14□□□□□ -0.31
PCM1-204ENST00000517730 CA5BP1Q8WTZ4 195 aa13.14□□□□□ -0.31
PCM1-204ENST00000517730 IGKV1-27A0A075B6S5 117 aa13.13□□□□□ -0.31
PCM1-204ENST00000517730 ZFP92A6NM28 416 aa13.13□□□□□ -0.31
PCM1-204ENST00000517730 CHST1O43916 411 aa13.13□□□□□ -0.31
PCM1-204ENST00000517730 CYTIPO60759 359 aa13.13□□□□□ -0.31
PCM1-204ENST00000517730 TCN2P20062 427 aa13.13□□□□□ -0.31
PCM1-204ENST00000517730 NPBWR2P48146 333 aa13.13□□□□□ -0.31
PCM1-204ENST00000517730 PIGYQ3MUY2 71 aa13.13□□□□□ -0.31
PCM1-204ENST00000517730 SLC25A24Q6NUK1 477 aa13.13□□□□□ -0.31
PCM1-204ENST00000517730 C17orf82Q86X59 251 aaPredicted RBP13.13□□□□□ -0.31
PCM1-204ENST00000517730 LMX1AQ8TE12 382 aa13.13□□□□□ -0.31
PCM1-204ENST00000517730 DNASE2BQ8WZ79 361 aa13.13□□□□□ -0.31
PCM1-204ENST00000517730 TMEM54Q969K7 222 aa13.13□□□□□ -0.31
PCM1-204ENST00000517730 OR14J1Q9UGF5 321 aa13.13□□□□□ -0.31
PCM1-204ENST00000517730 EXPH5Q8NEV8 1989 aa13.13□□□□□ -0.31
PCM1-204ENST00000517730 IFNA1P01562 189 aa13.13□□□□□ -0.31
PCM1-204ENST00000517730 TK1P04183 234 aa13.13□□□□□ -0.31
PCM1-204ENST00000517730 SNRPCP09234 159 aaKnown RBP13.13□□□□□ -0.31
PCM1-204ENST00000517730 COL10A1Q03692 680 aa13.13□□□□□ -0.31
PCM1-204ENST00000517730 MPV17LQ2QL34 196 aa13.13□□□□□ -0.31
PCM1-204ENST00000517730 SNAI3Q3KNW1 292 aa13.13□□□□□ -0.31
PCM1-204ENST00000517730 ZNF880Q6PDB4 577 aa13.13□□□□□ -0.31
PCM1-204ENST00000517730 C5orf24Q7Z6I8 188 aa13.13□□□□□ -0.31
PCM1-204ENST00000517730 MAML2Q8IZL2 1156 aaPredicted RBP13.13□□□□□ -0.31
PCM1-204ENST00000517730 ZNF784Q8NCA9 323 aaPredicted RBP13.13□□□□□ -0.31
PCM1-204ENST00000517730 IL22RA2Q969J5 263 aa13.13□□□□□ -0.31
PCM1-204ENST00000517730 NABP1Q96AH0 204 aa13.13□□□□□ -0.31
PCM1-204ENST00000517730 POM121Q96HA1 1249 aa13.13□□□□□ -0.31
PCM1-204ENST00000517730 TPSD1Q9BZJ3 242 aa13.13□□□□□ -0.31
PCM1-204ENST00000517730 PLEK2Q9NYT0 353 aa13.13□□□□□ -0.31
PCM1-204ENST00000517730 ST3GAL6Q9Y274 331 aa13.13□□□□□ -0.31
PCM1-204ENST00000517730 F5P12259 2224 aa13.13□□□□□ -0.31
PCM1-204ENST00000517730 PIGBOS1A0A0B4J2F0 54 aa13.12□□□□□ -0.31
PCM1-204ENST00000517730 A0A1W2PPC4 97 aa13.12□□□□□ -0.31
PCM1-204ENST00000517730 UCP1P25874 307 aa13.12□□□□□ -0.31
PCM1-204ENST00000517730 PDLIM4P50479 330 aa13.12□□□□□ -0.31
PCM1-204ENST00000517730 SPIN3Q5JUX0 258 aa13.12□□□□□ -0.31
PCM1-204ENST00000517730 BRICD5Q6PL45 260 aa13.12□□□□□ -0.31
PCM1-204ENST00000517730 Q6ZS49 121 aa13.12□□□□□ -0.31
PCM1-204ENST00000517730 MRGPRGQ86SM5 289 aa13.12□□□□□ -0.31
PCM1-204ENST00000517730 NFAM1Q8NET5 270 aaPredicted RBP13.12□□□□□ -0.31
PCM1-204ENST00000517730 PLPPR1Q8TBJ4 325 aa13.12□□□□□ -0.31
PCM1-204ENST00000517730 AGMATQ9BSE5 352 aa13.12□□□□□ -0.31
PCM1-204ENST00000517730 NAT8Q9UHE5 227 aa13.12□□□□□ -0.31
PCM1-204ENST00000517730 XKRY2A2RUG3 117 aa13.12□□□□□ -0.31
PCM1-204ENST00000517730 OR2J2O76002 312 aa13.12□□□□□ -0.31
PCM1-204ENST00000517730 IGLV3-19P01714 112 aa13.12□□□□□ -0.31
PCM1-204ENST00000517730 SCGB1C1Q8TD33 95 aa13.12□□□□□ -0.31
PCM1-204ENST00000517730 HIST1H2AAQ96QV6 131 aa13.12□□□□□ -0.31
PCM1-204ENST00000517730 CDCA3Q99618 268 aaPredicted RBP13.12□□□□□ -0.31
PCM1-204ENST00000517730 ZNF665Q9H7R5 613 aa13.12□□□□□ -0.31
PCM1-204ENST00000517730 METTL7AQ9H8H3 244 aa13.12□□□□□ -0.31
PCM1-204ENST00000517730 RNF115Q9Y4L5 304 aa13.12□□□□□ -0.31
PCM1-204ENST00000517730 ZNF705GA8MUZ8 300 aaPredicted RBP13.11□□□□□ -0.31
PCM1-204ENST00000517730 CA3P07451 260 aa13.11□□□□□ -0.31
PCM1-204ENST00000517730 PFN1P07737 140 aaKnown RBP13.11□□□□□ -0.31
PCM1-204ENST00000517730 PTGDSP41222 190 aa13.11□□□□□ -0.31
PCM1-204ENST00000517730 PAX9P55771 341 aa13.11□□□□□ -0.31
PCM1-204ENST00000517730 CLN3Q13286 438 aa13.11□□□□□ -0.31
PCM1-204ENST00000517730 OR2M3Q8NG83 312 aa13.11□□□□□ -0.31
PCM1-204ENST00000517730 PSMG3Q9BT73 122 aaPredicted RBP13.11□□□□□ -0.31
PCM1-204ENST00000517730 ZNF442Q9H7R0 627 aa13.11□□□□□ -0.31
PCM1-204ENST00000517730 RPRMQ9NS64 109 aa13.11□□□□□ -0.31
PCM1-204ENST00000517730 SLC7A10Q9NS82 523 aa13.11□□□□□ -0.31
PCM1-204ENST00000517730 MMP17Q9ULZ9 603 aa13.11□□□□□ -0.31
PCM1-204ENST00000517730 ATG2AQ2TAZ0 1938 aa13.11□□□□□ -0.31
PCM1-204ENST00000517730 IGKV1-12A0A0C4DH73 117 aa13.11□□□□□ -0.31
PCM1-204ENST00000517730 PIAS2O75928 621 aa13.11□□□□□ -0.31
PCM1-204ENST00000517730 IGKV1D-12P01611 117 aa13.11□□□□□ -0.31
PCM1-204ENST00000517730 TNFRSF9Q07011 255 aa13.11□□□□□ -0.31
PCM1-204ENST00000517730 PMS2P11Q13670 270 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms