RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 SLAMF6Q96DU3 332 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 MED30Q96HR3 178 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 POM121L2Q96KW2 1035 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 SGK494Q96LW2 274 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 ZNF75AQ96N20 296 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 MBOAT4Q96T53 435 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 TBX5Q99593 518 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 ATF6BQ99941 703 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 APOL4Q9BPW4 351 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 GABARAPL3Q9BY60 117 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 BCL2L14Q9BZR8 327 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 TPK1Q9H3S4 243 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 MARCH7Q9H992 704 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 DYNLRB1Q9NP97 96 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 CBLN4Q9NTU7 201 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 C1orf123Q9NWV4 160 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 CLN6Q9NWW5 311 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 USE1Q9NZ43 259 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 DNAJC27Q9NZQ0 273 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 TAAR3PQ9P1P4 343 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 CYB5R1Q9UHQ9 305 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 KCNG2Q9UJ96 466 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 RPH3ALQ9UNE2 315 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 POLDIP2Q9Y2S7 368 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 STARD10Q9Y365 291 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 ETV7Q9Y603 341 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 URGCP-MRPS24S4R325 110 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 ARHGAP21Q5T5U3 1957 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 INTS1Q8N201 2190 aaKnown RBP2.31□□□□□ -2.04
SKP1-204ENST00000517691 PPIAL4CA0A0B4J2A2 164 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 LOC100130705A0A1B0GUX0 176 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 CCDC182A6NF36 153 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 ZNF670-ZNF695F2Z2N8 137 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 CHEK1O14757 476 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 MLNRO43193 412 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 SYNGR3O43761 229 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 ENTPD6O75354 484 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 CD3GP09693 182 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 PPIAL4GP0DN37 164 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 COX5BP10606 129 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 SLC2A1P11166 492 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 PSKH1P11801 424 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 G0S2P27469 103 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 MPV17P39210 176 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 RGS6P49758 472 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 ACTBP60709 375 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 PPP1CBP62140 327 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 ACTA2P62736 377 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 GRB2P62993 217 aaKnown RBP2.31□□□□□ -2.04
SKP1-204ENST00000517691 ACTG1P63261 375 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 ACTG2P63267 376 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 ACTC1P68032 377 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 ACTA1P68133 377 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 HIST1H3AP68431 136 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 IL5RAQ01344 420 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 MAD2L1BPQ15013 274 aaPredicted RBP2.31□□□□□ -2.04
SKP1-204ENST00000517691 PSG3Q16557 428 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 MOGQ16653 247 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 KLHL22Q53GT1 634 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 TEX30Q5JUR7 227 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 HIST2H3PS2Q5TEC6 136 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 LINC01590Q5TEZ4 76 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 ZNF691Q5VV52 312 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 NXNL2Q5VZ03 156 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 RFPL4BQ6ZWI9 263 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 HIST2H3AQ71DI3 136 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 H2BFWTQ7Z2G1 175 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 NAA40Q86UY6 237 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 SLC35F2Q8IXU6 374 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 OR5AS1Q8N127 324 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 ZCCHC24Q8N2G6 241 aaKnown RBP2.31□□□□□ -2.04
SKP1-204ENST00000517691 DHRSXQ8N5I4 330 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 GCSAMQ8N6F7 178 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 OR2AK2Q8NG84 335 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 OR11H4Q8NGC9 324 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 OR5L1Q8NGL2 311 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 OTOSQ8NHW6 89 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 SLC25A40Q8TBP6 338 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 KLF14Q8TD94 323 aaPredicted RBP2.31□□□□□ -2.04
SKP1-204ENST00000517691 TRUB1Q8WWH5 349 aaKnown RBP2.31□□□□□ -2.04
SKP1-204ENST00000517691 MRPL24Q96A35 216 aaKnown RBP2.31□□□□□ -2.04
SKP1-204ENST00000517691 APOBEC3DQ96AK3 386 aaPredicted RBP2.31□□□□□ -2.04
SKP1-204ENST00000517691 CMBLQ96DG6 245 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 Q96MT0 163 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 UHRF2Q96PU4 802 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 CNN2Q99439 309 aaKnown RBP2.31□□□□□ -2.04
SKP1-204ENST00000517691 TRAF4Q9BUZ4 470 aaPredicted RBP2.31□□□□□ -2.04
SKP1-204ENST00000517691 KRTAP3-1Q9BYR8 98 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 TTTY10Q9BZA0 68 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 OR2J1Q9GZK6 312 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 YIPF3Q9GZM5 350 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 ZNF442Q9H7R0 627 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 ZNF665Q9H7R5 613 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 OR2S2Q9NQN1 319 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 C8orf4Q9NR00 106 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 INPP5EQ9NRR6 644 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 MYEF2Q9P2K5 600 aaKnown RBP2.31□□□□□ -2.04
SKP1-204ENST00000517691 WARS2Q9UGM6 360 aaKnown RBP2.31□□□□□ -2.04
SKP1-204ENST00000517691 CLEC2DQ9UHP7 191 aa2.31□□□□□ -2.04
SKP1-204ENST00000517691 IKZF2Q9UKS7 526 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms