RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 HIF1ANQ9NWT6 349 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 TXNL4BQ9NX01 149 aaKnown RBP4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 NDUFB11Q9NX14 153 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 KAAG1Q9UBP8 84 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 CTSZQ9UBR2 303 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 OR5V1Q9UGF6 321 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 KCNS2Q9ULS6 477 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 STUB1Q9UNE7 303 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 MAB21L2Q9Y586 359 aa4.81□□□□□ -1.64
SCARNA6.1-201ENST00000516989 F8P00451 2351 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 MALRD1Q5VYJ5 2156 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 IGKV1D-17A0A075B6S4 117 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 LOC105371242A0A075B767 164 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 A0A1B0GW55 424 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 A0A1W2PP11 408 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 F5H0A9 414 aaPredicted RBP4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 SIRPB1O00241 398 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 PDCD5O14737 125 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 SH2D1BO14796 132 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 SIGLEC5O15389 551 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 SCAF4O95104 1147 aaKnown RBP4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 HAND1O96004 215 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 MSMBP08118 114 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 DUX4L2P0CJ85 424 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 DUX4L3P0CJ86 424 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 DUX4L4P0CJ87 422 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 DUX4L5P0CJ88 424 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 DUX4L6P0CJ89 424 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 DUX4L7P0CJ90 424 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 GTF2F2P13984 249 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 SELLP14151 372 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ZNF44P15621 663 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ADRA2CP18825 462 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 SERPINA2P20848 420 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 GALP22466 123 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 GADD45AP24522 165 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 NPY4RP50391 375 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 BMXP51813 675 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 DVL1P1P54792 670 aaPredicted RBP4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 LSM3P62310 102 aaKnown RBP4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 COL10A1Q03692 680 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 GPR176Q14439 515 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 DGUOKQ16854 277 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 DCAF12L2Q5VW00 463 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 AWAT2Q6E213 333 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 FAM166AQ6J272 317 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 DUX4L9Q6RFH8 374 aaPredicted RBP4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 METAP1DQ6UB28 335 aaPredicted RBP4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 C16orf54Q6UWD8 224 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 BTNL3Q6UXE8 466 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ASCL4Q6XD76 172 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ZNF841Q6ZN19 808 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ZNF788Q6ZQV5 615 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 Q6ZSN1 163 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 BTN2A1Q7KYR7 527 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 LRRTM1Q86UE6 522 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 CDH26Q8IXH8 852 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 OSR2Q8N2R0 312 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 Q8N3U1 123 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 FGFRL1Q8N441 504 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ZNF561Q8N587 486 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ASCC1Q8N9N2 400 aaKnown RBP4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 OR4D6Q8NGJ1 314 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 H1FXQ92522 213 aaKnown RBP4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 RNF125Q96EQ8 232 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 SDSLQ96GA7 329 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 KCTD7Q96MP8 289 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 GAFA1Q96PS6 74 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 UQCC2Q9BRT2 126 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 MRPS26Q9BYN8 205 aaKnown RBP4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 DNTTIP1Q9H147 329 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 PLEKHA2Q9HB19 425 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 RHOFQ9HBH0 211 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 PLGRKTQ9HBL7 147 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 HES4Q9HCC6 221 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 HMG20AQ9NP66 347 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 IL36RNQ9UBH0 155 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 DUX4Q9UBX2 424 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 SLC25A10Q9UBX3 287 aaPredicted RBP4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 STEAP1Q9UHE8 339 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 MRPS28Q9Y2Q9 187 aaKnown RBP4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 V9GY05 133 aa4.8□□□□□ -1.64
SCARNA6.1-201ENST00000516989 TRAV1-2A0A0B4J238 106 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 A0A0G2JMP0 313 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 A0A0X1KG70 313 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 KIR2DS1A0A191URI9 304 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 SMIM30A4D0T7 59 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 TRIM64CA6NLI5 447 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 K7N7A8 449 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 AIREO43918 545 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 CRTAPO75718 401 aaPredicted RBP4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ECDO95905 644 aaPredicted RBP4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 SMIM18P0DKX4 95 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 RAB3BP20337 219 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 GABRR1P24046 479 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 HTR2CP28335 458 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 FGF9P31371 208 aaPredicted RBP4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 RANBP1P43487 201 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 CLDN12P56749 244 aa4.79□□□□□ -1.64
SCARNA6.1-201ENST00000516989 FGF12P61328 243 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms