RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 PGA4P0DJD7 388 aa-3.13□□□□□ -2.91
RNU6-539P-201ENST00000516665 PGA3P0DJD8 388 aa-3.13□□□□□ -2.91
RNU6-539P-201ENST00000516665 STX1BP61266 288 aa-3.13□□□□□ -2.91
RNU6-539P-201ENST00000516665 SEMG2Q02383 582 aa-3.13□□□□□ -2.91
RNU6-539P-201ENST00000516665 CFAP58Q5T655 872 aa-3.13□□□□□ -2.91
RNU6-539P-201ENST00000516665 MBOAT1Q6ZNC8 495 aa-3.13□□□□□ -2.91
RNU6-539P-201ENST00000516665 MARCH3Q86UD3 253 aa-3.13□□□□□ -2.91
RNU6-539P-201ENST00000516665 CBLN2Q8IUK8 224 aa-3.13□□□□□ -2.91
RNU6-539P-201ENST00000516665 BCORP1Q8N888 145 aa-3.13□□□□□ -2.91
RNU6-539P-201ENST00000516665 YIPF7Q8N8F6 280 aa-3.13□□□□□ -2.91
RNU6-539P-201ENST00000516665 OR2M3Q8NG83 312 aa-3.13□□□□□ -2.91
RNU6-539P-201ENST00000516665 NSMCE2Q96MF7 247 aa-3.13□□□□□ -2.91
RNU6-539P-201ENST00000516665 OR2A7Q96R45 310 aa-3.13□□□□□ -2.91
RNU6-539P-201ENST00000516665 EIF5A2Q9GZV4 153 aaKnown RBP-3.13□□□□□ -2.91
RNU6-539P-201ENST00000516665 REEP1Q9H902 201 aa-3.13□□□□□ -2.91
RNU6-539P-201ENST00000516665 RBMX2Q9Y388 322 aaKnown RBP-3.13□□□□□ -2.91
RNU6-539P-201ENST00000516665 SBNO1A3KN83 1393 aa-3.13□□□□□ -2.91
RNU6-539P-201ENST00000516665 MTUS2Q5JR59 1369 aa-3.13□□□□□ -2.91
RNU6-539P-201ENST00000516665 JCADQ9P266 1359 aa-3.13□□□□□ -2.91
RNU6-539P-201ENST00000516665 ZNF608Q9ULD9 1512 aaPredicted RBP-3.14□□□□□ -2.91
RNU6-539P-201ENST00000516665 FREM3P0C091 2139 aa-3.14□□□□□ -2.91
RNU6-539P-201ENST00000516665 C9J4A7 227 aa-3.14□□□□□ -2.91
RNU6-539P-201ENST00000516665 RAD51CO43502 376 aa-3.14□□□□□ -2.91
RNU6-539P-201ENST00000516665 SLC37A4O43826 429 aa-3.14□□□□□ -2.91
RNU6-539P-201ENST00000516665 AKR1C2P52895 323 aa-3.14□□□□□ -2.91
RNU6-539P-201ENST00000516665 AKR1C1Q04828 323 aa-3.14□□□□□ -2.91
RNU6-539P-201ENST00000516665 INCA1Q0VD86 236 aa-3.14□□□□□ -2.91
RNU6-539P-201ENST00000516665 PAFAH1B3Q15102 231 aaKnown RBP-3.14□□□□□ -2.91
RNU6-539P-201ENST00000516665 PDK4Q16654 411 aa-3.14□□□□□ -2.91
RNU6-539P-201ENST00000516665 USH1GQ495M9 461 aa-3.14□□□□□ -2.91
RNU6-539P-201ENST00000516665 ACTBL2Q562R1 376 aa-3.14□□□□□ -2.91
RNU6-539P-201ENST00000516665 KRTCAP2Q8N6L1 136 aa-3.14□□□□□ -2.91
RNU6-539P-201ENST00000516665 OR5B3Q8NH48 314 aa-3.14□□□□□ -2.91
RNU6-539P-201ENST00000516665 ZNF396Q96N95 335 aaPredicted RBP-3.14□□□□□ -2.91
RNU6-539P-201ENST00000516665 PRMT8Q9NR22 394 aaPredicted RBP-3.14□□□□□ -2.91
RNU6-539P-201ENST00000516665 CDC42SE1Q9NRR8 79 aa-3.14□□□□□ -2.91
RNU6-539P-201ENST00000516665 TRIM10Q9UDY6 481 aa-3.14□□□□□ -2.91
RNU6-539P-201ENST00000516665 HTTP42858 3142 aa-3.15□□□□□ -2.91
RNU6-539P-201ENST00000516665 IGHV1-18A0A0C4DH31 117 aa-3.15□□□□□ -2.91
RNU6-539P-201ENST00000516665 TOR1AO14656 332 aa-3.15□□□□□ -2.91
RNU6-539P-201ENST00000516665 NDC80O14777 642 aa-3.15□□□□□ -2.91
RNU6-539P-201ENST00000516665 P4HA2O15460 535 aa-3.15□□□□□ -2.91
RNU6-539P-201ENST00000516665 LY6G6CO95867 125 aa-3.15□□□□□ -2.91
RNU6-539P-201ENST00000516665 SHBGP04278 402 aa-3.15□□□□□ -2.91
RNU6-539P-201ENST00000516665 PFN2P35080 140 aa-3.15□□□□□ -2.91
RNU6-539P-201ENST00000516665 KIAA1024LP59773 190 aa-3.15□□□□□ -2.91
RNU6-539P-201ENST00000516665 COX6A2Q02221 97 aa-3.15□□□□□ -2.91
RNU6-539P-201ENST00000516665 SSX1Q16384 188 aa-3.15□□□□□ -2.91
RNU6-539P-201ENST00000516665 WDR88Q6ZMY6 472 aa-3.15□□□□□ -2.91
RNU6-539P-201ENST00000516665 CLEC20AQ6ZU45 233 aa-3.15□□□□□ -2.91
RNU6-539P-201ENST00000516665 TAF8Q7Z7C8 310 aa-3.15□□□□□ -2.91
RNU6-539P-201ENST00000516665 GALNT10Q86SR1 603 aa-3.15□□□□□ -2.91
RNU6-539P-201ENST00000516665 OR10W1Q8NGF6 305 aa-3.15□□□□□ -2.91
RNU6-539P-201ENST00000516665 SMCR5Q8TEV8 140 aa-3.15□□□□□ -2.91
RNU6-539P-201ENST00000516665 SPRYD4Q8WW59 207 aaPredicted RBP-3.15□□□□□ -2.91
RNU6-539P-201ENST00000516665 PIBF1Q8WXW3 757 aa-3.15□□□□□ -2.91
RNU6-539P-201ENST00000516665 SLC7A6Q92536 515 aa-3.15□□□□□ -2.91
RNU6-539P-201ENST00000516665 MYO18AQ92614 2054 aaKnown RBP-3.15□□□□□ -2.91
RNU6-539P-201ENST00000516665 WDR19Q8NEZ3 1342 aa-3.16□□□□□ -2.91
RNU6-539P-201ENST00000516665 SCN10AQ9Y5Y9 1956 aa-3.16□□□□□ -2.91
RNU6-539P-201ENST00000516665 ANGPT2O15123 496 aa-3.16□□□□□ -2.92
RNU6-539P-201ENST00000516665 FLOT1O75955 427 aa-3.16□□□□□ -2.92
RNU6-539P-201ENST00000516665 SMC2O95347 1197 aa-3.16□□□□□ -2.92
RNU6-539P-201ENST00000516665 SERPINA5P05154 406 aa-3.16□□□□□ -2.92
RNU6-539P-201ENST00000516665 ABHD2P08910 425 aa-3.16□□□□□ -2.92
RNU6-539P-201ENST00000516665 CECR9P0C854 216 aa-3.16□□□□□ -2.92
RNU6-539P-201ENST00000516665 IGHV3-30-3P0DP02 117 aa-3.16□□□□□ -2.92
RNU6-539P-201ENST00000516665 DEFA4P12838 97 aa-3.16□□□□□ -2.92
RNU6-539P-201ENST00000516665 MYL9P24844 172 aa-3.16□□□□□ -2.92
RNU6-539P-201ENST00000516665 ACAA2P42765 397 aaKnown RBP-3.16□□□□□ -2.92
RNU6-539P-201ENST00000516665 PPICP45877 212 aa-3.16□□□□□ -2.92
RNU6-539P-201ENST00000516665 XCL1P47992 114 aa-3.16□□□□□ -2.92
RNU6-539P-201ENST00000516665 HADHQ16836 314 aaKnown RBP-3.16□□□□□ -2.92
RNU6-539P-201ENST00000516665 REEP3Q6NUK4 255 aa-3.16□□□□□ -2.92
RNU6-539P-201ENST00000516665 LINC00322Q6ZN03 302 aaPredicted RBP-3.16□□□□□ -2.92
RNU6-539P-201ENST00000516665 FAM71CQ8NEG0 241 aa-3.16□□□□□ -2.92
RNU6-539P-201ENST00000516665 KCTD4Q8WVF5 259 aa-3.16□□□□□ -2.92
RNU6-539P-201ENST00000516665 MUCL1Q96DR8 90 aa-3.16□□□□□ -2.92
RNU6-539P-201ENST00000516665 ZMYND19Q96E35 227 aaPredicted RBP-3.16□□□□□ -2.92
RNU6-539P-201ENST00000516665 FAM19A4Q96LR4 140 aa-3.16□□□□□ -2.92
RNU6-539P-201ENST00000516665 SLC38A2Q96QD8 506 aa-3.16□□□□□ -2.92
RNU6-539P-201ENST00000516665 MGLLQ99685 303 aa-3.16□□□□□ -2.92
RNU6-539P-201ENST00000516665 C11orf70Q9BRQ4 267 aa-3.16□□□□□ -2.92
RNU6-539P-201ENST00000516665 ILKAPQ9H0C8 392 aaPredicted RBP-3.16□□□□□ -2.92
RNU6-539P-201ENST00000516665 RAB18Q9NP72 206 aa-3.16□□□□□ -2.92
RNU6-539P-201ENST00000516665 LSM7Q9UK45 103 aaKnown RBP-3.16□□□□□ -2.92
RNU6-539P-201ENST00000516665 BCORL1Q5H9F3 1711 aa-3.16□□□□□ -2.92
RNU6-539P-201ENST00000516665 SCAF11Q99590 1463 aaKnown RBP-3.16□□□□□ -2.92
RNU6-539P-201ENST00000516665 ABCB11O95342 1321 aa-3.17□□□□□ -2.92
RNU6-539P-201ENST00000516665 SLC5A10A0PJK1 596 aa-3.17□□□□□ -2.92
RNU6-539P-201ENST00000516665 UPK1AO00322 258 aa-3.17□□□□□ -2.92
RNU6-539P-201ENST00000516665 GABRPO00591 440 aa-3.17□□□□□ -2.92
RNU6-539P-201ENST00000516665 MAGEB3O15480 346 aa-3.17□□□□□ -2.92
RNU6-539P-201ENST00000516665 SLC25A16P16260 332 aa-3.17□□□□□ -2.92
RNU6-539P-201ENST00000516665 LAP3P28838 519 aa-3.17□□□□□ -2.92
RNU6-539P-201ENST00000516665 ACTR1AP61163 376 aa-3.17□□□□□ -2.92
RNU6-539P-201ENST00000516665 ZNF846Q147U1 533 aa-3.17□□□□□ -2.92
RNU6-539P-201ENST00000516665 MMDQ15546 238 aa-3.17□□□□□ -2.92
RNU6-539P-201ENST00000516665 RASL11AQ6T310 242 aa-3.17□□□□□ -2.92
RNU6-539P-201ENST00000516665 LINC00596Q86U02 117 aa-3.17□□□□□ -2.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms