RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 ING4Q9UNL4 249 aa10.99□□□□□ -0.65
TCOF1-215ENST00000515516 KBTBD11-OT1A0A1B0GTJ5 212 aa10.98□□□□□ -0.65
TCOF1-215ENST00000515516 FAM90A22PA8MWA6 464 aa10.98□□□□□ -0.65
TCOF1-215ENST00000515516 GABRPO00591 440 aa10.98□□□□□ -0.65
TCOF1-215ENST00000515516 CSTBP04080 98 aaKnown RBP10.98□□□□□ -0.65
TCOF1-215ENST00000515516 JUNBP17275 347 aaPredicted RBP10.98□□□□□ -0.65
TCOF1-215ENST00000515516 CD34P28906 385 aa10.98□□□□□ -0.65
TCOF1-215ENST00000515516 KCNJ3P48549 501 aa10.98□□□□□ -0.65
TCOF1-215ENST00000515516 BLCAPP62952 87 aa10.98□□□□□ -0.65
TCOF1-215ENST00000515516 OR2G6Q5TZ20 316 aa10.98□□□□□ -0.65
TCOF1-215ENST00000515516 ZNF529Q6P280 563 aa10.98□□□□□ -0.65
TCOF1-215ENST00000515516 BAIAP2L2Q6UXY1 529 aa10.98□□□□□ -0.65
TCOF1-215ENST00000515516 C1QL4Q86Z23 238 aa10.98□□□□□ -0.65
TCOF1-215ENST00000515516 OR51A2Q8NGJ7 313 aa10.98□□□□□ -0.65
TCOF1-215ENST00000515516 OR51T1Q8NGJ9 327 aa10.98□□□□□ -0.65
TCOF1-215ENST00000515516 OR10K1Q8NGX5 313 aa10.98□□□□□ -0.65
TCOF1-215ENST00000515516 TMEM80Q96HE8 168 aa10.98□□□□□ -0.65
TCOF1-215ENST00000515516 PPIL3Q9H2H8 161 aaKnown RBP10.98□□□□□ -0.65
TCOF1-215ENST00000515516 ZNF286AQ9HBT8 521 aa10.98□□□□□ -0.65
TCOF1-215ENST00000515516 TMEM138Q9NPI0 162 aa10.98□□□□□ -0.65
TCOF1-215ENST00000515516 PAK1IP1Q9NWT1 392 aaPredicted RBP10.98□□□□□ -0.65
TCOF1-215ENST00000515516 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.98□□□□□ -0.65
TCOF1-215ENST00000515516 CKLFQ9UBR5 152 aa10.98□□□□□ -0.65
TCOF1-215ENST00000515516 DIMT1Q9UNQ2 313 aaKnown RBP10.98□□□□□ -0.65
TCOF1-215ENST00000515516 ZNF281Q9Y2X9 895 aa10.98□□□□□ -0.65
TCOF1-215ENST00000515516 AMMECR1Q9Y4X0 333 aaPredicted RBP10.98□□□□□ -0.65
TCOF1-215ENST00000515516 BUB1B-PAK6H3BSN5 160 aa10.97□□□□□ -0.65
TCOF1-215ENST00000515516 CLIC3O95833 236 aa10.97□□□□□ -0.65
TCOF1-215ENST00000515516 OPN1MWP04001 364 aa10.97□□□□□ -0.65
TCOF1-215ENST00000515516 OPN1MW2P0DN77 364 aa10.97□□□□□ -0.65
TCOF1-215ENST00000515516 OPN1MW3P0DN78 364 aa10.97□□□□□ -0.65
TCOF1-215ENST00000515516 CD28P10747 220 aa10.97□□□□□ -0.65
TCOF1-215ENST00000515516 BDKRB2P30411 391 aa10.97□□□□□ -0.65
TCOF1-215ENST00000515516 ZNF93P35789 620 aaPredicted RBP10.97□□□□□ -0.65
TCOF1-215ENST00000515516 OR3A4PP47883 348 aa10.97□□□□□ -0.65
TCOF1-215ENST00000515516 HLA-DRB5Q30154 266 aa10.97□□□□□ -0.65
TCOF1-215ENST00000515516 TPTE2P1Q5T6R2 138 aa10.97□□□□□ -0.65
TCOF1-215ENST00000515516 DDI2Q5TDH0 399 aa10.97□□□□□ -0.65
TCOF1-215ENST00000515516 HIST2H2BDQ6DRA6 164 aa10.97□□□□□ -0.65
TCOF1-215ENST00000515516 NDUFA11Q86Y39 141 aa10.97□□□□□ -0.65
TCOF1-215ENST00000515516 LYG1Q8N1E2 194 aa10.97□□□□□ -0.65
TCOF1-215ENST00000515516 DHRSXQ8N5I4 330 aa10.97□□□□□ -0.65
TCOF1-215ENST00000515516 PACRGLQ8N7B6 248 aa10.97□□□□□ -0.65
TCOF1-215ENST00000515516 OR9G1Q8NH87 305 aa10.97□□□□□ -0.65
TCOF1-215ENST00000515516 RGP1Q92546 391 aaPredicted RBP10.97□□□□□ -0.65
TCOF1-215ENST00000515516 SMIM19Q96E16 107 aa10.97□□□□□ -0.65
TCOF1-215ENST00000515516 NCOR1P1Q9H4R4 102 aa10.97□□□□□ -0.65
TCOF1-215ENST00000515516 LIN7BQ9HAP6 207 aa10.97□□□□□ -0.65
TCOF1-215ENST00000515516 KIF25Q9UIL4 384 aa10.97□□□□□ -0.65
TCOF1-215ENST00000515516 ST3GAL6Q9Y274 331 aa10.97□□□□□ -0.65
TCOF1-215ENST00000515516 A0A087X0M5 115 aa10.96□□□□□ -0.65
TCOF1-215ENST00000515516 TRAV24A0A0B4J272 114 aa10.96□□□□□ -0.65
TCOF1-215ENST00000515516 A0A1B0GX30 115 aa10.96□□□□□ -0.65
TCOF1-215ENST00000515516 OOSP1A8MZH6 123 aa10.96□□□□□ -0.65
TCOF1-215ENST00000515516 OGG1O15527 345 aa10.96□□□□□ -0.65
TCOF1-215ENST00000515516 ZNF780AO75290 641 aaPredicted RBP10.96□□□□□ -0.65
TCOF1-215ENST00000515516 CDRT1O95170 752 aa10.96□□□□□ -0.65
TCOF1-215ENST00000515516 IGLV1-47P01700 117 aa10.96□□□□□ -0.65
TCOF1-215ENST00000515516 FAM106CPP0CH98 169 aa10.96□□□□□ -0.65
TCOF1-215ENST00000515516 CD24P25063 80 aa10.96□□□□□ -0.65
TCOF1-215ENST00000515516 GDNFP39905 211 aa10.96□□□□□ -0.65
TCOF1-215ENST00000515516 RIPK1Q13546 671 aa10.96□□□□□ -0.65
TCOF1-215ENST00000515516 C17orf58Q2M2W7 97 aa10.96□□□□□ -0.65
TCOF1-215ENST00000515516 PIGYQ3MUY2 71 aa10.96□□□□□ -0.65
TCOF1-215ENST00000515516 ASCL4Q6XD76 172 aa10.96□□□□□ -0.65
TCOF1-215ENST00000515516 CENPVQ7Z7K6 275 aaPredicted RBP10.96□□□□□ -0.65
TCOF1-215ENST00000515516 OSR2Q8N2R0 312 aa10.96□□□□□ -0.65
TCOF1-215ENST00000515516 OR4F17Q8NGA8 305 aa10.96□□□□□ -0.65
TCOF1-215ENST00000515516 OR52N1Q8NH53 320 aa10.96□□□□□ -0.65
TCOF1-215ENST00000515516 GHSRQ92847 366 aa10.96□□□□□ -0.65
TCOF1-215ENST00000515516 RPEQ96AT9 228 aa10.96□□□□□ -0.65
TCOF1-215ENST00000515516 OR4F4Q96R69 305 aa10.96□□□□□ -0.65
TCOF1-215ENST00000515516 SLC25A33Q9BSK2 321 aa10.96□□□□□ -0.65
TCOF1-215ENST00000515516 DPCDQ9BVM2 203 aaPredicted RBP10.96□□□□□ -0.65
TCOF1-215ENST00000515516 MMP28Q9H239 520 aa10.96□□□□□ -0.65
TCOF1-215ENST00000515516 CALYQ9NYX4 217 aa10.96□□□□□ -0.65
TCOF1-215ENST00000515516 IDI2-AS1Q9NZ38 188 aa10.96□□□□□ -0.65
TCOF1-215ENST00000515516 EFCAB10A6NFE3 127 aa10.95□□□□□ -0.66
TCOF1-215ENST00000515516 OR7C1O76099 320 aaPredicted RBP10.95□□□□□ -0.66
TCOF1-215ENST00000515516 OR2F2O95006 317 aa10.95□□□□□ -0.66
TCOF1-215ENST00000515516 IL1AP01583 271 aa10.95□□□□□ -0.66
TCOF1-215ENST00000515516 SERPINA2P20848 420 aa10.95□□□□□ -0.66
TCOF1-215ENST00000515516 GPR176Q14439 515 aa10.95□□□□□ -0.66
TCOF1-215ENST00000515516 LTC4SQ16873 150 aa10.95□□□□□ -0.66
TCOF1-215ENST00000515516 YIF1BQ5BJH7 314 aa10.95□□□□□ -0.66
TCOF1-215ENST00000515516 XAF1Q6GPH4 301 aa10.95□□□□□ -0.66
TCOF1-215ENST00000515516 LINC00596Q86U02 117 aa10.95□□□□□ -0.66
TCOF1-215ENST00000515516 SUMF2Q8NBJ7 301 aa10.95□□□□□ -0.66
TCOF1-215ENST00000515516 Q8NFD4 153 aa10.95□□□□□ -0.66
TCOF1-215ENST00000515516 OR13A1Q8NGR1 328 aa10.95□□□□□ -0.66
TCOF1-215ENST00000515516 MRGPRDQ8TDS7 321 aa10.95□□□□□ -0.66
TCOF1-215ENST00000515516 TOMM40LQ969M1 308 aa10.95□□□□□ -0.66
TCOF1-215ENST00000515516 R3HDM4Q96D70 268 aa10.95□□□□□ -0.66
TCOF1-215ENST00000515516 KIRREL1Q96J84 757 aa10.95□□□□□ -0.66
TCOF1-215ENST00000515516 RBM14Q96PK6 669 aaKnown RBP10.95□□□□□ -0.66
TCOF1-215ENST00000515516 CITED2Q99967 270 aaPredicted RBP10.95□□□□□ -0.66
TCOF1-215ENST00000515516 WNT10AQ9GZT5 417 aa10.95□□□□□ -0.66
TCOF1-215ENST00000515516 IL36GQ9NZH8 169 aa10.95□□□□□ -0.66
TCOF1-215ENST00000515516 CLEC2DQ9UHP7 191 aa10.95□□□□□ -0.66
TCOF1-215ENST00000515516 HSPE1-MOB4S4R3N1 261 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms