RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 RNF115Q9Y4L5 304 aa7.7□□□□□ -1.18
CPNE4-213ENST00000515418 USF3Q68DE3 2245 aa7.69□□□□□ -1.18
CPNE4-213ENST00000515418 DOPEY1Q5JWR5 2465 aa7.69□□□□□ -1.18
CPNE4-213ENST00000515418 C7orf66A4D0T2 115 aa7.69□□□□□ -1.18
CPNE4-213ENST00000515418 OR5H14A6NHG9 310 aa7.69□□□□□ -1.18
CPNE4-213ENST00000515418 VSTM5A8MXK1 200 aa7.69□□□□□ -1.18
CPNE4-213ENST00000515418 SRRM5B3KS81 715 aa7.69□□□□□ -1.18
CPNE4-213ENST00000515418 M0R233 179 aa7.69□□□□□ -1.18
CPNE4-213ENST00000515418 PSG2P11465 335 aa7.69□□□□□ -1.18
CPNE4-213ENST00000515418 CXCL3P19876 107 aa7.69□□□□□ -1.18
CPNE4-213ENST00000515418 TBPP20226 339 aa7.69□□□□□ -1.18
CPNE4-213ENST00000515418 LOXP28300 417 aaPredicted RBP7.69□□□□□ -1.18
CPNE4-213ENST00000515418 APOBEC3AP31941 199 aaPredicted RBP7.69□□□□□ -1.18
CPNE4-213ENST00000515418 UBE2MP61081 183 aaKnown RBP7.69□□□□□ -1.18
CPNE4-213ENST00000515418 RRAS2P62070 204 aaPredicted RBP7.69□□□□□ -1.18
CPNE4-213ENST00000515418 BEX5Q5H9J7 111 aa7.69□□□□□ -1.18
CPNE4-213ENST00000515418 SPIN3Q5JUX0 258 aa7.69□□□□□ -1.18
CPNE4-213ENST00000515418 AADACL3Q5VUY0 350 aa7.69□□□□□ -1.18
CPNE4-213ENST00000515418 GLDNQ6ZMI3 551 aaPredicted RBP7.69□□□□□ -1.18
CPNE4-213ENST00000515418 DEFB108BQ8NET1 73 aa7.69□□□□□ -1.18
CPNE4-213ENST00000515418 UBALD1Q8TB05 177 aa7.69□□□□□ -1.18
CPNE4-213ENST00000515418 MRPL30Q8TCC3 161 aaKnown RBP7.69□□□□□ -1.18
CPNE4-213ENST00000515418 ST6GAL2Q96JF0 529 aa7.69□□□□□ -1.18
CPNE4-213ENST00000515418 DMRTB1Q96MA1 342 aa7.69□□□□□ -1.18
CPNE4-213ENST00000515418 FYTTD1Q96QD9 318 aaKnown RBP7.69□□□□□ -1.18
CPNE4-213ENST00000515418 ZNF2Q9BSG1 426 aaPredicted RBP7.69□□□□□ -1.18
CPNE4-213ENST00000515418 MED28Q9H204 178 aa7.69□□□□□ -1.18
CPNE4-213ENST00000515418 IFT22Q9H7X7 185 aa7.69□□□□□ -1.18
CPNE4-213ENST00000515418 RANGRFQ9HD47 186 aaPredicted RBP7.69□□□□□ -1.18
CPNE4-213ENST00000515418 Q9N2K0 584 aa7.69□□□□□ -1.18
CPNE4-213ENST00000515418 SLC2A8Q9NY64 477 aa7.69□□□□□ -1.18
CPNE4-213ENST00000515418 EDARQ9UNE0 448 aa7.69□□□□□ -1.18
CPNE4-213ENST00000515418 PPP1R3CQ9UQK1 317 aa7.69□□□□□ -1.18
CPNE4-213ENST00000515418 ARID1AO14497 2285 aa7.69□□□□□ -1.18
CPNE4-213ENST00000515418 FAM208BQ5VWN6 2430 aa7.69□□□□□ -1.18
CPNE4-213ENST00000515418 CENPEQ02224 2701 aa7.69□□□□□ -1.18
CPNE4-213ENST00000515418 LRRK2Q5S007 2527 aa7.69□□□□□ -1.18
CPNE4-213ENST00000515418 ASH1LQ9NR48 2969 aaKnown RBP7.68□□□□□ -1.18
CPNE4-213ENST00000515418 IGKV1D-17A0A075B6S4 117 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 B8ZZF3 427 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 SSNA1O43805 119 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 LHBP01229 141 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 AKR1C4P17516 323 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 TNFSF4P23510 183 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 PRDX2P32119 198 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 CD80P33681 288 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 GABRA2P47869 451 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 SEC61A1P61619 476 aaKnown RBP7.68□□□□□ -1.18
CPNE4-213ENST00000515418 COL10A1Q03692 680 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 AESQ08117 197 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 RBM39Q14498 530 aaKnown RBP7.68□□□□□ -1.18
CPNE4-213ENST00000515418 SMIM21Q3B7S5 101 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 C4orf46Q504U0 113 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 ACTBL2Q562R1 376 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 UXS1Q8NBZ7 420 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 OR11H7Q8NGC8 314 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 ZNF286AQ9HBT8 521 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 DNAJB11Q9UBS4 358 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 ZNF69Q9UC07 566 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 WIPI2Q9Y4P8 454 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 BET1O15155 118 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 KNG1P01042 644 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 OR4E1P0C645 316 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 NFYAP23511 347 aaPredicted RBP7.68□□□□□ -1.18
CPNE4-213ENST00000515418 LMO1P25800 156 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 CFHR2P36980 270 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 GATA4P43694 442 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 MECP2P51608 486 aaKnown RBP7.68□□□□□ -1.18
CPNE4-213ENST00000515418 NKX2-5P52952 324 aaPredicted RBP7.68□□□□□ -1.18
CPNE4-213ENST00000515418 GRK1Q15835 563 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 ZNF672Q499Z4 452 aaPredicted RBP7.68□□□□□ -1.18
CPNE4-213ENST00000515418 METTL11BQ5VVY1 283 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 ZNF660Q6AZW8 331 aaPredicted RBP7.68□□□□□ -1.18
CPNE4-213ENST00000515418 FIP1L1Q6UN15 594 aaKnown RBP7.68□□□□□ -1.18
CPNE4-213ENST00000515418 ZNF497Q6ZNH5 498 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 MUC20Q8N307 709 aaPredicted RBP7.68□□□□□ -1.18
CPNE4-213ENST00000515418 ZNF843Q8N446 348 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 PRR18Q8N4B5 295 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 ARRDC1Q8N5I2 433 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 TPRX1Q8N7U7 411 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 RTBDNQ9BSG5 229 aaPredicted RBP7.68□□□□□ -1.18
CPNE4-213ENST00000515418 DYNLRB1Q9NP97 96 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 DECR2Q9NUI1 292 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 NECAP2Q9NVZ3 263 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 RNF7Q9UBF6 113 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 GLS2Q9UI32 602 aa7.68□□□□□ -1.18
CPNE4-213ENST00000515418 RAI1Q7Z5J4 1906 aaPredicted RBP7.68□□□□□ -1.18
CPNE4-213ENST00000515418 MAP1AP78559 2803 aaPredicted RBP7.67□□□□□ -1.18
CPNE4-213ENST00000515418 IGKV1-6A0A0C4DH72 117 aa7.67□□□□□ -1.18
CPNE4-213ENST00000515418 A0A1B0GW55 424 aa7.67□□□□□ -1.18
CPNE4-213ENST00000515418 SMLR1H3BR10 107 aa7.67□□□□□ -1.18
CPNE4-213ENST00000515418 H3BUI4 141 aa7.67□□□□□ -1.18
CPNE4-213ENST00000515418 GLAP06280 429 aa7.67□□□□□ -1.18
CPNE4-213ENST00000515418 DUX4L2P0CJ85 424 aa7.67□□□□□ -1.18
CPNE4-213ENST00000515418 DUX4L3P0CJ86 424 aa7.67□□□□□ -1.18
CPNE4-213ENST00000515418 DUX4L4P0CJ87 422 aa7.67□□□□□ -1.18
CPNE4-213ENST00000515418 DUX4L5P0CJ88 424 aa7.67□□□□□ -1.18
CPNE4-213ENST00000515418 DUX4L6P0CJ89 424 aa7.67□□□□□ -1.18
CPNE4-213ENST00000515418 DUX4L7P0CJ90 424 aa7.67□□□□□ -1.18
CPNE4-213ENST00000515418 FCGR2CP31995 323 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms