RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 ELP2Q6IA86 826 aa9.29□□□□□ -0.92
VCAN-212ENST00000515397 ASCL4Q6XD76 172 aa9.29□□□□□ -0.92
VCAN-212ENST00000515397 ABHD12Q8N2K0 398 aa9.29□□□□□ -0.92
VCAN-212ENST00000515397 JAGN1Q8N5M9 183 aa9.29□□□□□ -0.92
VCAN-212ENST00000515397 OR11H6Q8NGC7 330 aa9.29□□□□□ -0.92
VCAN-212ENST00000515397 OR13A1Q8NGR1 328 aa9.29□□□□□ -0.92
VCAN-212ENST00000515397 OR5R1Q8NH85 324 aa9.29□□□□□ -0.92
VCAN-212ENST00000515397 UBALD1Q8TB05 177 aa9.29□□□□□ -0.92
VCAN-212ENST00000515397 NDNFQ8TB73 568 aa9.29□□□□□ -0.92
VCAN-212ENST00000515397 WFDC12Q8WWY7 111 aa9.29□□□□□ -0.92
VCAN-212ENST00000515397 TMED9Q9BVK6 235 aa9.29□□□□□ -0.92
VCAN-212ENST00000515397 METTL9Q9H1A3 318 aa9.29□□□□□ -0.92
VCAN-212ENST00000515397 TMEM133Q9H2Q1 129 aa9.29□□□□□ -0.92
VCAN-212ENST00000515397 MMP24Q9Y5R2 645 aa9.29□□□□□ -0.92
VCAN-212ENST00000515397 CLPXO76031 633 aa9.28□□□□□ -0.92
VCAN-212ENST00000515397 OR7C1O76099 320 aaPredicted RBP9.28□□□□□ -0.92
VCAN-212ENST00000515397 CSTBP04080 98 aaKnown RBP9.28□□□□□ -0.92
VCAN-212ENST00000515397 NFYBP25208 207 aa9.28□□□□□ -0.92
VCAN-212ENST00000515397 GLP1RP43220 463 aa9.28□□□□□ -0.92
VCAN-212ENST00000515397 GP2P55259 537 aaKnown RBP9.28□□□□□ -0.92
VCAN-212ENST00000515397 TAS2R43P59537 309 aa9.28□□□□□ -0.92
VCAN-212ENST00000515397 HABP2Q14520 560 aaPredicted RBP9.28□□□□□ -0.92
VCAN-212ENST00000515397 C17orf58Q2M2W7 97 aa9.28□□□□□ -0.92
VCAN-212ENST00000515397 ACSM3Q53FZ2 586 aa9.28□□□□□ -0.92
VCAN-212ENST00000515397 FAM53AQ6NSI3 398 aaPredicted RBP9.28□□□□□ -0.92
VCAN-212ENST00000515397 GLIPR1L1Q6UWM5 242 aa9.28□□□□□ -0.92
VCAN-212ENST00000515397 OSR2Q8N2R0 312 aa9.28□□□□□ -0.92
VCAN-212ENST00000515397 C11orf44Q8N8P7 122 aa9.28□□□□□ -0.92
VCAN-212ENST00000515397 SUMF2Q8NBJ7 301 aa9.28□□□□□ -0.92
VCAN-212ENST00000515397 OR51T1Q8NGJ9 327 aa9.28□□□□□ -0.92
VCAN-212ENST00000515397 SGMS2Q8NHU3 365 aa9.28□□□□□ -0.92
VCAN-212ENST00000515397 MRGPRDQ8TDS7 321 aa9.28□□□□□ -0.92
VCAN-212ENST00000515397 CCDC107Q8WV48 283 aa9.28□□□□□ -0.92
VCAN-212ENST00000515397 CORO2AQ92828 525 aa9.28□□□□□ -0.92
VCAN-212ENST00000515397 FOXRED1Q96CU9 486 aaPredicted RBP9.28□□□□□ -0.92
VCAN-212ENST00000515397 DERL3Q96Q80 235 aa9.28□□□□□ -0.92
VCAN-212ENST00000515397 S100A13Q99584 98 aa9.28□□□□□ -0.92
VCAN-212ENST00000515397 CDCA4Q9BXL8 241 aa9.28□□□□□ -0.92
VCAN-212ENST00000515397 CLEC7AQ9BXN2 247 aa9.28□□□□□ -0.92
VCAN-212ENST00000515397 BANF2Q9H503 90 aa9.28□□□□□ -0.92
VCAN-212ENST00000515397 RHOFQ9HBH0 211 aa9.28□□□□□ -0.92
VCAN-212ENST00000515397 ZNF286AQ9HBT8 521 aa9.28□□□□□ -0.92
VCAN-212ENST00000515397 CKLFQ9UBR5 152 aa9.28□□□□□ -0.92
VCAN-212ENST00000515397 UBE2J1Q9Y385 318 aaPredicted RBP9.28□□□□□ -0.92
VCAN-212ENST00000515397 FUOMA2VDF0 154 aa9.27□□□□□ -0.93
VCAN-212ENST00000515397 H0YHG0 523 aa9.27□□□□□ -0.93
VCAN-212ENST00000515397 GPX5O75715 221 aa9.27□□□□□ -0.93
VCAN-212ENST00000515397 RBP4P02753 201 aa9.27□□□□□ -0.93
VCAN-212ENST00000515397 HSMCR30P0CW71 290 aa9.27□□□□□ -0.93
VCAN-212ENST00000515397 MAP2K4P45985 399 aa9.27□□□□□ -0.93
VCAN-212ENST00000515397 PROK1P58294 105 aa9.27□□□□□ -0.93
VCAN-212ENST00000515397 RBM39Q14498 530 aaKnown RBP9.27□□□□□ -0.93
VCAN-212ENST00000515397 MED22Q15528 200 aa9.27□□□□□ -0.93
VCAN-212ENST00000515397 FBLN7Q53RD9 439 aa9.27□□□□□ -0.93
VCAN-212ENST00000515397 ATAD3CQ5T2N8 411 aa9.27□□□□□ -0.93
VCAN-212ENST00000515397 IZUMO2Q6UXV1 221 aa9.27□□□□□ -0.93
VCAN-212ENST00000515397 CHST4Q8NCG5 386 aa9.27□□□□□ -0.93
VCAN-212ENST00000515397 Q8NFD4 153 aa9.27□□□□□ -0.93
VCAN-212ENST00000515397 OR4D6Q8NGJ1 314 aa9.27□□□□□ -0.93
VCAN-212ENST00000515397 OR4P4Q8NGL7 312 aa9.27□□□□□ -0.93
VCAN-212ENST00000515397 MYDGFQ969H8 173 aa9.27□□□□□ -0.93
VCAN-212ENST00000515397 TMEM203Q969S6 136 aa9.27□□□□□ -0.93
VCAN-212ENST00000515397 MALSU1Q96EH3 234 aa9.27□□□□□ -0.93
VCAN-212ENST00000515397 CNBD2Q96M20 576 aa9.27□□□□□ -0.93
VCAN-212ENST00000515397 DPCDQ9BVM2 203 aaPredicted RBP9.27□□□□□ -0.93
VCAN-212ENST00000515397 CCDC90BQ9GZT6 254 aa9.27□□□□□ -0.93
VCAN-212ENST00000515397 GAL3ST2Q9H3Q3 398 aa9.27□□□□□ -0.93
VCAN-212ENST00000515397 SCN3BQ9NY72 215 aa9.27□□□□□ -0.93
VCAN-212ENST00000515397 FOXJ3Q9UPW0 622 aa9.27□□□□□ -0.93
VCAN-212ENST00000515397 MRPS28Q9Y2Q9 187 aaKnown RBP9.27□□□□□ -0.93
VCAN-212ENST00000515397 LSM2Q9Y333 95 aaKnown RBP9.27□□□□□ -0.93
VCAN-212ENST00000515397 TBL2Q9Y4P3 447 aaKnown RBP9.27□□□□□ -0.93
VCAN-212ENST00000515397 VWFP04275 2813 aa9.26□□□□□ -0.93
VCAN-212ENST00000515397 A0A1B0GUS0 222 aa9.26□□□□□ -0.93
VCAN-212ENST00000515397 A0A1W2PPE3 182 aa9.26□□□□□ -0.93
VCAN-212ENST00000515397 TSPAN9O75954 239 aa9.26□□□□□ -0.93
VCAN-212ENST00000515397 CSN2P05814 226 aa9.26□□□□□ -0.93
VCAN-212ENST00000515397 CGB3P0DN86 165 aa9.26□□□□□ -0.93
VCAN-212ENST00000515397 CGB7P0DN87 165 aa9.26□□□□□ -0.93
VCAN-212ENST00000515397 MYF6P23409 242 aa9.26□□□□□ -0.93
VCAN-212ENST00000515397 GABRA5P31644 462 aa9.26□□□□□ -0.93
VCAN-212ENST00000515397 RBM11P57052 281 aaKnown RBP9.26□□□□□ -0.93
VCAN-212ENST00000515397 IL13RA2Q14627 380 aa9.26□□□□□ -0.93
VCAN-212ENST00000515397 IRF3Q14653 427 aa9.26□□□□□ -0.93
VCAN-212ENST00000515397 SPHARQ15513 63 aa9.26□□□□□ -0.93
VCAN-212ENST00000515397 RSBN1Q5VWQ0 802 aaPredicted RBP9.26□□□□□ -0.93
VCAN-212ENST00000515397 LIPKQ5VXJ0 399 aa9.26□□□□□ -0.93
VCAN-212ENST00000515397 OR10K2Q6IF99 312 aa9.26□□□□□ -0.93
VCAN-212ENST00000515397 HEPN1Q6WQI6 88 aa9.26□□□□□ -0.93
VCAN-212ENST00000515397 Q6ZS46 218 aa9.26□□□□□ -0.93
VCAN-212ENST00000515397 CEACAM19Q7Z692 300 aa9.26□□□□□ -0.93
VCAN-212ENST00000515397 C5orf24Q7Z6I8 188 aa9.26□□□□□ -0.93
VCAN-212ENST00000515397 TMEM104Q8NE00 496 aa9.26□□□□□ -0.93
VCAN-212ENST00000515397 CPNE2Q96FN4 548 aaPredicted RBP9.26□□□□□ -0.93
VCAN-212ENST00000515397 CITED1Q99966 193 aa9.26□□□□□ -0.93
VCAN-212ENST00000515397 MND1Q9BWT6 205 aa9.26□□□□□ -0.93
VCAN-212ENST00000515397 BARHL1Q9BZE3 327 aa9.26□□□□□ -0.93
VCAN-212ENST00000515397 C16orf95Q9H693 158 aa9.26□□□□□ -0.93
VCAN-212ENST00000515397 TCF7L1Q9HCS4 588 aa9.26□□□□□ -0.93
VCAN-212ENST00000515397 ABCB10Q9NRK6 738 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms