RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 BPIFB2Q8N4F0 458 aa17.39■□□□□ 0.37
LSM6-207ENST00000515311 NEK7Q8TDX7 302 aa17.39■□□□□ 0.37
LSM6-207ENST00000515311 SULT4A1Q9BR01 284 aa17.39■□□□□ 0.37
LSM6-207ENST00000515311 PECRQ9BY49 303 aa17.39■□□□□ 0.37
LSM6-207ENST00000515311 POLR3KQ9Y2Y1 108 aaPredicted RBP17.39■□□□□ 0.37
LSM6-207ENST00000515311 TRBV23-1A0A0A0MS06 115 aa17.38■□□□□ 0.37
LSM6-207ENST00000515311 FUOMA2VDF0 154 aa17.38■□□□□ 0.37
LSM6-207ENST00000515311 SERPINE3A8MV23 424 aa17.38■□□□□ 0.37
LSM6-207ENST00000515311 FAM157AC9JC47 383 aa17.38■□□□□ 0.37
LSM6-207ENST00000515311 H7C1Q1 480 aa17.38■□□□□ 0.37
LSM6-207ENST00000515311 MFNGO00587 321 aa17.38■□□□□ 0.37
LSM6-207ENST00000515311 PHF1O43189 567 aaPredicted RBP17.38■□□□□ 0.37
LSM6-207ENST00000515311 CLPXO76031 633 aa17.38■□□□□ 0.37
LSM6-207ENST00000515311 GSTP1P09211 210 aaKnown RBP17.38■□□□□ 0.37
LSM6-207ENST00000515311 P2RX3P56373 397 aa17.38■□□□□ 0.37
LSM6-207ENST00000515311 COQ2Q96H96 371 aa17.38■□□□□ 0.37
LSM6-207ENST00000515311 WDFY2Q96P53 400 aa17.38■□□□□ 0.37
LSM6-207ENST00000515311 FAAP24Q9BTP7 215 aa17.38■□□□□ 0.37
LSM6-207ENST00000515311 NCOR1P1Q9H4R4 102 aa17.38■□□□□ 0.37
LSM6-207ENST00000515311 PTTG2Q9NZH5 202 aa17.38■□□□□ 0.37
LSM6-207ENST00000515311 LPAR3Q9UBY5 353 aa17.38■□□□□ 0.37
LSM6-207ENST00000515311 FAM25AB3EWG3 89 aa17.37■□□□□ 0.37
LSM6-207ENST00000515311 FAM25CB3EWG5 89 aa17.37■□□□□ 0.37
LSM6-207ENST00000515311 FAM25GB3EWG6 89 aa17.37■□□□□ 0.37
LSM6-207ENST00000515311 TALDO1P37837 337 aa17.37■□□□□ 0.37
LSM6-207ENST00000515311 AESQ08117 197 aa17.37■□□□□ 0.37
LSM6-207ENST00000515311 EDDM3AQ14507 147 aa17.37■□□□□ 0.37
LSM6-207ENST00000515311 TMEM249Q2WGJ8 235 aa17.37■□□□□ 0.37
LSM6-207ENST00000515311 KRBOX4Q5JUW0 171 aa17.37■□□□□ 0.37
LSM6-207ENST00000515311 TMEM69Q5SWH9 247 aa17.37■□□□□ 0.37
LSM6-207ENST00000515311 RSBN1Q5VWQ0 802 aaPredicted RBP17.37■□□□□ 0.37
LSM6-207ENST00000515311 SLC35E4Q6ICL7 350 aa17.37■□□□□ 0.37
LSM6-207ENST00000515311 ZNF497Q6ZNH5 498 aa17.37■□□□□ 0.37
LSM6-207ENST00000515311 BTN2A1Q7KYR7 527 aa17.37■□□□□ 0.37
LSM6-207ENST00000515311 RTN4RL2Q86UN3 420 aa17.37■□□□□ 0.37
LSM6-207ENST00000515311 GAPTQ8N292 157 aa17.37■□□□□ 0.37
LSM6-207ENST00000515311 C8orf46Q8TAG6 207 aa17.37■□□□□ 0.37
LSM6-207ENST00000515311 PLPPR1Q8TBJ4 325 aa17.37■□□□□ 0.37
LSM6-207ENST00000515311 COX4I2Q96KJ9 171 aa17.37■□□□□ 0.37
LSM6-207ENST00000515311 DCTN5Q9BTE1 182 aa17.37■□□□□ 0.37
LSM6-207ENST00000515311 ETAA1Q9NY74 926 aa17.37■□□□□ 0.37
LSM6-207ENST00000515311 KCNK7Q9Y2U2 307 aa17.37■□□□□ 0.37
LSM6-207ENST00000515311 TRAV18A0A075B6X5 111 aa17.36■□□□□ 0.37
LSM6-207ENST00000515311 LOC105371242A0A075B767 164 aa17.36■□□□□ 0.37
LSM6-207ENST00000515311 TMEM30CPA0ZSE6 113 aa17.36■□□□□ 0.37
LSM6-207ENST00000515311 UBE2QL1A1L167 161 aa17.36■□□□□ 0.37
LSM6-207ENST00000515311 B4DSR2 109 aa17.36■□□□□ 0.37
LSM6-207ENST00000515311 TPPPO94811 219 aa17.36■□□□□ 0.37
LSM6-207ENST00000515311 GNB3P16520 340 aa17.36■□□□□ 0.37
LSM6-207ENST00000515311 ZFP36P26651 326 aaKnown RBP17.36■□□□□ 0.37
LSM6-207ENST00000515311 S100A5P33763 92 aa17.36■□□□□ 0.37
LSM6-207ENST00000515311 GZMKP49863 264 aa17.36■□□□□ 0.37
LSM6-207ENST00000515311 MEF2CQ06413 473 aaPredicted RBP17.36■□□□□ 0.37
LSM6-207ENST00000515311 CDNFQ49AH0 187 aa17.36■□□□□ 0.37
LSM6-207ENST00000515311 CIARTQ8N365 385 aaPredicted RBP17.36■□□□□ 0.37
LSM6-207ENST00000515311 MAPK1IP1LQ8NDC0 245 aa17.36■□□□□ 0.37
LSM6-207ENST00000515311 OR4M1Q8NGD0 313 aa17.36■□□□□ 0.37
LSM6-207ENST00000515311 H1FXQ92522 213 aaKnown RBP17.36■□□□□ 0.37
LSM6-207ENST00000515311 DMRTB1Q96MA1 342 aa17.36■□□□□ 0.37
LSM6-207ENST00000515311 EXTL2Q9UBQ6 330 aa17.36■□□□□ 0.37
LSM6-207ENST00000515311 RPUSD1Q9UJJ7 312 aaKnown RBP17.36■□□□□ 0.37
LSM6-207ENST00000515311 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.36■□□□□ 0.37
LSM6-207ENST00000515311 ODAMA1E959 279 aa17.35■□□□□ 0.37
LSM6-207ENST00000515311 POM121CA8CG34 1229 aa17.35■□□□□ 0.37
LSM6-207ENST00000515311 MSMBP08118 114 aa17.35■□□□□ 0.37
LSM6-207ENST00000515311 MNDAP41218 407 aa17.35■□□□□ 0.37
LSM6-207ENST00000515311 GLIPR1P48060 266 aa17.35■□□□□ 0.37
LSM6-207ENST00000515311 EDDM3BP56851 147 aa17.35■□□□□ 0.37
LSM6-207ENST00000515311 RPL31P62899 125 aaKnown RBP17.35■□□□□ 0.37
LSM6-207ENST00000515311 LCN2P80188 198 aa17.35■□□□□ 0.37
LSM6-207ENST00000515311 PNLIPRP3Q17RR3 467 aa17.35■□□□□ 0.37
LSM6-207ENST00000515311 ZNF260Q3ZCT1 412 aa17.35■□□□□ 0.37
LSM6-207ENST00000515311 CNIH2Q6PI25 160 aa17.35■□□□□ 0.37
LSM6-207ENST00000515311 LINC01356Q8N9X3 169 aa17.35■□□□□ 0.37
LSM6-207ENST00000515311 DACT3Q96B18 629 aaPredicted RBP17.35■□□□□ 0.37
LSM6-207ENST00000515311 RIMS4Q9H426 269 aaPredicted RBP17.35■□□□□ 0.37
LSM6-207ENST00000515311 AK3Q9UIJ7 227 aa17.35■□□□□ 0.37
LSM6-207ENST00000515311 PPIAL4CA0A0B4J2A2 164 aa17.34■□□□□ 0.37
LSM6-207ENST00000515311 C22orf46C9J442 243 aa17.34■□□□□ 0.37
LSM6-207ENST00000515311 NAPSAO96009 420 aa17.34■□□□□ 0.37
LSM6-207ENST00000515311 MT-ND4P03905 459 aa17.34■□□□□ 0.37
LSM6-207ENST00000515311 MELTFP08582 738 aa17.34■□□□□ 0.37
LSM6-207ENST00000515311 IGHV4-31P0DP07 118 aa17.34■□□□□ 0.37
LSM6-207ENST00000515311 TNFSF8P32971 234 aa17.34■□□□□ 0.37
LSM6-207ENST00000515311 TAS2R20P59543 309 aa17.34■□□□□ 0.37
LSM6-207ENST00000515311 PAX2Q02962 417 aa17.34■□□□□ 0.37
LSM6-207ENST00000515311 HACD4Q5VWC8 232 aa17.34■□□□□ 0.37
LSM6-207ENST00000515311 OLFML2AQ68BL7 652 aa17.34■□□□□ 0.37
LSM6-207ENST00000515311 BAIAP2L2Q6UXY1 529 aa17.34■□□□□ 0.37
LSM6-207ENST00000515311 LY6G5BQ8NDX9 201 aa17.34■□□□□ 0.37
LSM6-207ENST00000515311 OR6Q1Q8NGQ2 317 aa17.34■□□□□ 0.37
LSM6-207ENST00000515311 DYRK2Q92630 601 aa17.34■□□□□ 0.37
LSM6-207ENST00000515311 DIRAS2Q96HU8 199 aa17.34■□□□□ 0.37
LSM6-207ENST00000515311 CYYR1Q96J86 154 aa17.34■□□□□ 0.37
LSM6-207ENST00000515311 AUNIPQ9H7T9 357 aa17.34■□□□□ 0.37
LSM6-207ENST00000515311 ZMAT3Q9HA38 289 aaKnown RBP17.34■□□□□ 0.37
LSM6-207ENST00000515311 C12orf4Q9NQ89 552 aa17.34■□□□□ 0.37
LSM6-207ENST00000515311 C19orf12Q9NSK7 152 aa17.34■□□□□ 0.37
LSM6-207ENST00000515311 OR6C3Q9NZP0 311 aa17.34■□□□□ 0.37
LSM6-207ENST00000515311 RABL2AQ9UBK7 228 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms