RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 IL11P20809 199 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 MSR1P21757 451 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 OTX1P32242 354 aaPredicted RBP3.18□□□□□ -1.9
CAST-242ENST00000515063 NUP62P37198 522 aaPredicted RBP3.18□□□□□ -1.9
CAST-242ENST00000515063 TMEM50BP56557 158 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 TAS2R46P59540 309 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 EIF5AP63241 154 aaKnown RBP3.18□□□□□ -1.9
CAST-242ENST00000515063 CCL7P80098 99 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 FMODQ06828 376 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 UBE2V1Q13404 147 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 UNC119Q13432 240 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 TAF13Q15543 124 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 ODF4Q2M2E3 257 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 MOGAT2Q3SYC2 334 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 TMEM128Q5BJH2 165 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 LYSMD4Q5XG99 296 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 ZNF660Q6AZW8 331 aaPredicted RBP3.18□□□□□ -1.9
CAST-242ENST00000515063 UQCC3Q6UW78 93 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 ARSKQ6UWY0 536 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 ASCL4Q6XD76 172 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 CHMP1BQ7LBR1 199 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 SLC16A14Q7RTX9 510 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 TRAPPC6BQ86SZ2 158 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 ZNF546Q86UE3 836 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 ANGPTL5Q86XS5 388 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 LINC00346Q8IVM7 164 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 PRSS58Q8IYP2 241 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 OR5AS1Q8N127 324 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 CIARTQ8N365 385 aaPredicted RBP3.18□□□□□ -1.9
CAST-242ENST00000515063 KDM8Q8N371 416 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 DEFB119Q8N690 84 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 ZNF283Q8N7M2 679 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 SPERTQ8NA61 448 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 CHST4Q8NCG5 386 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 PXT1Q8NFP0 134 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 OR8B12Q8NGG6 310 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 OR10V1Q8NGI7 309 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 OR10S1Q8NGN2 331 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 OR5M1Q8NGP8 315 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 OR8S1Q8NH09 359 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 TERB2Q8NHR7 220 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 LHFPL5Q8TAF8 219 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 STOML3Q8TAV4 291 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 PAQR8Q8TEZ7 354 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 KCNE4Q8WWG9 221 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 EMG1Q92979 244 aaKnown RBP3.18□□□□□ -1.9
CAST-242ENST00000515063 RAB3CQ96E17 227 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 ADAT3Q96EY9 351 aaPredicted RBP3.18□□□□□ -1.9
CAST-242ENST00000515063 IMMP1LQ96LU5 166 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 C1orf147Q96MC9 270 aaPredicted RBP3.18□□□□□ -1.9
CAST-242ENST00000515063 OR6C1Q96RD1 312 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 SLC6A7Q99884 636 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 TMEM59Q9BXS4 323 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 CHST6Q9GZX3 395 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 SHARPINQ9H0F6 387 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 FXYD6Q9H0Q3 95 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 PRO3102Q9H379 93 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 KCNK15Q9H427 330 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 SH2D2AQ9NP31 389 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 RAB18Q9NP72 206 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 SDHAF2Q9NX18 166 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 MED29Q9NX70 200 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 RASL12Q9NYN1 266 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 ATPIF1Q9UII2 106 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 VSIG4Q9Y279 399 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 MRPS28Q9Y2Q9 187 aaKnown RBP3.18□□□□□ -1.9
CAST-242ENST00000515063 POLR1DQ9Y2S0 133 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 NOP16Q9Y3C1 178 aaKnown RBP3.18□□□□□ -1.9
CAST-242ENST00000515063 PTRH2Q9Y3E5 179 aaKnown RBP3.18□□□□□ -1.9
CAST-242ENST00000515063 PCDHGA1Q9Y5H4 931 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 CHCHD2Q9Y6H1 151 aaPredicted RBP3.18□□□□□ -1.9
CAST-242ENST00000515063 U3KQA8 63 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 V9GYS6 101 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 CACNA1GO43497 2377 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 TRIOBPQ9H2D6 2365 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 ASXL3Q9C0F0 2248 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 PI4KAP42356 2102 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 ALPK2Q86TB3 2170 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 NCOA6Q14686 2063 aaPredicted RBP3.17□□□□□ -1.9
CAST-242ENST00000515063 IGHV1-45A0A0A0MS14 117 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 IGHV3-20A0A0C4DH32 117 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 TEX13DA0A0J9YY54 714 aaPredicted RBP3.17□□□□□ -1.9
CAST-242ENST00000515063 MED19A0JLT2 244 aaPredicted RBP3.17□□□□□ -1.9
CAST-242ENST00000515063 MEIS3P1A6NDR6 274 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 ZSCAN5BA6NJL1 495 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 PMS2P5A8MQ11 134 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 C17orf51A8MQB3 221 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 C9J4A7 227 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 SULT2B1O00204 365 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 TAAR5O14804 337 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 FGF16O43320 207 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 SSX5O60225 188 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 GMFGO60234 142 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 RAD1O60671 282 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 ZG16O60844 167 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 CBR3O75828 277 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 OR2J2O76002 312 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 SIX6O95475 246 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 SFT2D2O95562 160 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 HLA-AP01891 365 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 187.8 ms